EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000011183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 3938 bases
Position: chrGeneScaffold_3413:100288-104225
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000010604	MMR_HSR1	PF01926.23	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011182	-	612	-	ENSTTRP00000010604	203 (aa)	-	UPI00018B59D4

Gene Model

Click here to download ENSTTRG00000011183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000011183	-	95	36.979	ENSTTRG00000015001	RAB5B	89	36.979
ENSTTRG00000011183	-	66	31.111	ENSTTRG00000006043	ARF5	80	31.111
ENSTTRG00000011183	-	79	39.506	ENSTTRG00000011120	HRAS	85	39.506
ENSTTRG00000011183	-	95	39.583	ENSTTRG00000001374	RAB5A	89	39.583
ENSTTRG00000011183	-	94	41.667	ENSTTRG00000009758	RAB11B	94	41.667
ENSTTRG00000011183	-	83	35.057	ENSTTRG00000015290	RERG	84	35.057
ENSTTRG00000011183	-	82	41.317	ENSTTRG00000002070	-	97	41.317
ENSTTRG00000011183	-	79	42.236	ENSTTRG00000006673	RAB5C	75	42.236
ENSTTRG00000011183	-	83	30.682	ENSTTRG00000015163	DNAJC27	64	30.682
ENSTTRG00000011183	-	87	42.781	ENSTTRG00000003887	RAB33A	79	42.781
ENSTTRG00000011183	-	91	53.804	ENSTTRG00000014408	RAB1B	92	53.804
ENSTTRG00000011183	-	81	45.455	ENSTTRG00000011885	RAB11A	77	45.455
ENSTTRG00000011183	-	80	38.323	ENSTTRG00000015258	RAB7A	81	38.323
ENSTTRG00000011183	-	80	40.476	ENSTTRG00000003956	RAB9B	83	40.476
ENSTTRG00000011183	-	89	34.254	ENSTTRG00000010419	RRAS2	91	34.715
ENSTTRG00000011183	-	89	41.711	ENSTTRG00000010425	RAB14	87	41.711
ENSTTRG00000011183	-	80	36.905	ENSTTRG00000014013	RAB9A	83	36.905
ENSTTRG00000011183	-	87	38.418	ENSTTRG00000013345	RAB25	85	38.418
ENSTTRG00000011183	-	84	39.560	ENSTTRG00000004102	RAB34	70	39.560
ENSTTRG00000011183	-	80	49.383	ENSTTRG00000006100	RAB30	80	49.383
ENSTTRG00000011183	-	91	36.757	ENSTTRG00000012599	KRAS	97	36.757
ENSTTRG00000011183	-	91	36.702	ENSTTRG00000015587	RAB22A	97	36.702
ENSTTRG00000011183	-	84	51.163	ENSTTRG00000008711	RAB12	77	51.163
ENSTTRG00000011183	-	79	36.810	ENSTTRG00000006194	MRAS	93	36.810
ENSTTRG00000011183	-	78	43.038	ENSTTRG00000005374	RAB6A	76	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011183	-	100	99.507	ENSG00000143545	RAB13	100	99.507	Homo_sapiens
ENSTTRG00000011183	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSTTRG00000011183	-	100	98.030	ENSANAG00000030247	-	100	98.030	Aotus_nancymaae
ENSTTRG00000011183	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSTTRG00000011183	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSTTRG00000011183	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSTTRG00000011183	-	100	98.522	ENSCJAG00000009933	-	100	98.522	Callithrix_jacchus
ENSTTRG00000011183	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSTTRG00000011183	-	99	91.584	ENSCPOG00000011491	-	99	91.584	Cavia_porcellus
ENSTTRG00000011183	-	100	99.015	ENSCCAG00000028502	-	100	99.015	Cebus_capucinus
ENSTTRG00000011183	-	100	99.507	ENSCATG00000041779	-	100	99.507	Cercocebus_atys
ENSTTRG00000011183	-	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSTTRG00000011183	-	100	99.507	ENSCANG00000036573	-	100	99.507	Colobus_angolensis_palliatus
ENSTTRG00000011183	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSTTRG00000011183	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSTTRG00000011183	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSTTRG00000011183	-	99	78.713	ENSDARG00000034771	rab13	99	78.713	Danio_rerio
ENSTTRG00000011183	-	100	95.074	ENSDORG00000001591	Rab13	100	95.074	Dipodomys_ordii
ENSTTRG00000011183	-	100	99.015	ENSEASG00005000683	-	100	99.015	Equus_asinus_asinus
ENSTTRG00000011183	-	100	99.015	ENSECAG00000016551	RAB13	100	99.015	Equus_caballus
ENSTTRG00000011183	-	99	90.594	ENSEEUG00000001233	-	99	90.594	Erinaceus_europaeus
ENSTTRG00000011183	-	99	77.073	ENSELUG00000012801	rab13	99	77.073	Esox_lucius
ENSTTRG00000011183	-	100	92.611	ENSFCAG00000045269	-	100	92.611	Felis_catus
ENSTTRG00000011183	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSTTRG00000011183	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSTTRG00000011183	-	96	77.835	ENSGACG00000011925	rab13	96	77.835	Gasterosteus_aculeatus
ENSTTRG00000011183	-	85	90.751	ENSGAGG00000000742	-	99	81.683	Gopherus_agassizii
ENSTTRG00000011183	-	100	99.507	ENSGGOG00000023693	RAB13	100	99.507	Gorilla_gorilla
ENSTTRG00000011183	-	100	89.655	ENSHGLG00000008749	RAB13	100	89.655	Heterocephalus_glaber_female
ENSTTRG00000011183	-	100	89.655	ENSHGLG00100013608	RAB13	100	89.655	Heterocephalus_glaber_male
ENSTTRG00000011183	-	99	73.039	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSTTRG00000011183	-	99	76.500	ENSIPUG00000003199	rab13	99	76.500	Ictalurus_punctatus
ENSTTRG00000011183	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSTTRG00000011183	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSTTRG00000011183	-	99	75.000	ENSKMAG00000001908	rab13	99	75.000	Kryptolebias_marmoratus
ENSTTRG00000011183	-	99	76.471	ENSLBEG00000026779	rab13	99	76.471	Labrus_bergylta
ENSTTRG00000011183	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSTTRG00000011183	-	100	99.507	ENSMFAG00000041018	RAB13	100	99.507	Macaca_fascicularis
ENSTTRG00000011183	-	100	99.507	ENSMNEG00000028951	-	100	99.507	Macaca_nemestrina
ENSTTRG00000011183	-	100	99.507	ENSMLEG00000042247	-	100	99.507	Mandrillus_leucophaeus
ENSTTRG00000011183	-	99	74.272	ENSMAMG00000014602	rab13	99	74.272	Mastacembelus_armatus
ENSTTRG00000011183	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSTTRG00000011183	-	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSTTRG00000011183	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSTTRG00000011183	-	99	93.069	ENSMODG00000017295	-	84	93.069	Monodelphis_domestica
ENSTTRG00000011183	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSTTRG00000011183	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSTTRG00000011183	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSTTRG00000011183	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSTTRG00000011183	-	99	75.122	ENSNBRG00000004124	rab13	99	75.122	Neolamprologus_brichardi
ENSTTRG00000011183	-	100	99.507	ENSNLEG00000028944	-	100	99.507	Nomascus_leucogenys
ENSTTRG00000011183	-	100	92.647	ENSMEUG00000009667	-	100	92.647	Notamacropus_eugenii
ENSTTRG00000011183	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSTTRG00000011183	-	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSTTRG00000011183	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSTTRG00000011183	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSTTRG00000011183	-	95	80.729	ENSOMEG00000008210	rab13	99	75.728	Oryzias_melastigma
ENSTTRG00000011183	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSTTRG00000011183	-	100	99.507	ENSPPAG00000028435	-	100	99.507	Pan_paniscus
ENSTTRG00000011183	-	100	92.611	ENSPPRG00000008865	-	100	92.611	Panthera_pardus
ENSTTRG00000011183	-	100	99.507	ENSPTRG00000001370	RAB13	100	99.507	Pan_troglodytes
ENSTTRG00000011183	-	100	99.507	ENSPANG00000004479	-	100	99.507	Papio_anubis
ENSTTRG00000011183	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSTTRG00000011183	-	67	97.222	ENSPEMG00000017353	-	100	97.222	Peromyscus_maniculatus_bairdii
ENSTTRG00000011183	-	100	93.137	ENSPCIG00000029350	-	100	93.137	Phascolarctos_cinereus
ENSTTRG00000011183	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSTTRG00000011183	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSTTRG00000011183	-	100	99.507	ENSPPYG00000000790	-	100	99.507	Pongo_abelii
ENSTTRG00000011183	-	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSTTRG00000011183	-	100	95.567	ENSPVAG00000011095	-	100	95.567	Pteropus_vampyrus
ENSTTRG00000011183	-	92	82.258	ENSPNAG00000004189	rab13	95	82.258	Pygocentrus_nattereri
ENSTTRG00000011183	-	100	93.103	ENSRNOG00000016733	Rab13	100	93.103	Rattus_norvegicus
ENSTTRG00000011183	-	100	99.015	ENSRBIG00000008552	-	100	99.015	Rhinopithecus_bieti
ENSTTRG00000011183	-	100	99.015	ENSRROG00000036885	-	100	99.015	Rhinopithecus_roxellana
ENSTTRG00000011183	-	100	98.522	ENSSBOG00000020342	-	100	98.522	Saimiri_boliviensis_boliviensis
ENSTTRG00000011183	-	100	92.157	ENSSHAG00000011866	-	100	92.157	Sarcophilus_harrisii
ENSTTRG00000011183	-	100	99.015	ENSSSCG00000006564	-	100	99.015	Sus_scrofa
ENSTTRG00000011183	-	99	75.980	ENSTRUG00000024177	rab13	99	75.980	Takifugu_rubripes
ENSTTRG00000011183	-	100	96.552	ENSTBEG00000012734	-	100	96.552	Tupaia_belangeri
ENSTTRG00000011183	-	70	80.420	ENSXETG00000020729	rab13	99	78.261	Xenopus_tropicalis
ENSTTRG00000011183	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus