EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000011851 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 27759 bases
Position: chrGeneScaffold_1274:262303-290061
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000011239	MRP-S27	PF10037.9	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011849	PTCD2-201	1167	-	ENSTTRP00000011239	388 (aa)	-	UPI00018B7824

Gene Model

Click here to download ENSTTRG00000011851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011851	PTCD2	99	82.429	ENSG00000049883	PTCD2	100	81.773	Homo_sapiens
ENSTTRG00000011851	PTCD2	89	48.276	ENSAPOG00000020682	ptcd2	91	48.276	Acanthochromis_polyacanthus
ENSTTRG00000011851	PTCD2	100	80.720	ENSAMEG00000007194	PTCD2	100	80.720	Ailuropoda_melanoleuca
ENSTTRG00000011851	PTCD2	89	43.678	ENSACIG00000002053	ptcd2	100	43.678	Amphilophus_citrinellus
ENSTTRG00000011851	PTCD2	89	47.262	ENSAOCG00000006616	ptcd2	89	47.262	Amphiprion_ocellaris
ENSTTRG00000011851	PTCD2	89	47.550	ENSAPEG00000022926	ptcd2	89	47.550	Amphiprion_percula
ENSTTRG00000011851	PTCD2	96	57.641	ENSACAG00000009747	PTCD2	94	57.641	Anolis_carolinensis
ENSTTRG00000011851	PTCD2	99	81.912	ENSANAG00000029353	PTCD2	99	81.912	Aotus_nancymaae
ENSTTRG00000011851	PTCD2	89	45.977	ENSACLG00000027742	ptcd2	89	45.977	Astatotilapia_calliptera
ENSTTRG00000011851	PTCD2	85	44.848	ENSAMXG00000029404	ptcd2	88	44.848	Astyanax_mexicanus
ENSTTRG00000011851	PTCD2	99	88.021	ENSBTAG00000014675	PTCD2	100	88.021	Bos_taurus
ENSTTRG00000011851	PTCD2	99	81.654	ENSCJAG00000016364	PTCD2	99	81.654	Callithrix_jacchus
ENSTTRG00000011851	PTCD2	99	79.275	ENSCAFG00000007982	PTCD2	90	79.275	Canis_familiaris
ENSTTRG00000011851	PTCD2	89	82.370	ENSCAFG00020019147	PTCD2	97	82.370	Canis_lupus_dingo
ENSTTRG00000011851	PTCD2	99	88.542	ENSCHIG00000017118	PTCD2	100	88.542	Capra_hircus
ENSTTRG00000011851	PTCD2	99	73.177	ENSCPOG00000040168	PTCD2	100	73.177	Cavia_porcellus
ENSTTRG00000011851	PTCD2	99	80.879	ENSCCAG00000029389	-	99	80.879	Cebus_capucinus
ENSTTRG00000011851	PTCD2	80	78.135	ENSCCAG00000021996	-	95	78.571	Cebus_capucinus
ENSTTRG00000011851	PTCD2	99	79.688	ENSCATG00000019069	PTCD2	100	79.688	Cercocebus_atys
ENSTTRG00000011851	PTCD2	98	73.298	ENSCLAG00000000072	PTCD2	99	73.298	Chinchilla_lanigera
ENSTTRG00000011851	PTCD2	99	80.469	ENSCSAG00000015623	PTCD2	100	80.469	Chlorocebus_sabaeus
ENSTTRG00000011851	PTCD2	89	58.621	ENSCHOG00000010634	PTCD2	100	58.621	Choloepus_hoffmanni
ENSTTRG00000011851	PTCD2	99	54.499	ENSCPBG00000000216	PTCD2	99	54.499	Chrysemys_picta_bellii
ENSTTRG00000011851	PTCD2	99	80.103	ENSCANG00000035636	PTCD2	99	80.103	Colobus_angolensis_palliatus
ENSTTRG00000011851	PTCD2	99	72.938	ENSCGRG00001015289	Ptcd2	84	72.938	Cricetulus_griseus_chok1gshd
ENSTTRG00000011851	PTCD2	99	72.938	ENSCGRG00000006193	Ptcd2	84	72.938	Cricetulus_griseus_crigri
ENSTTRG00000011851	PTCD2	89	45.533	ENSCVAG00000001285	ptcd2	89	45.533	Cyprinodon_variegatus
ENSTTRG00000011851	PTCD2	92	45.682	ENSDARG00000035391	ptcd2	94	45.682	Danio_rerio
ENSTTRG00000011851	PTCD2	99	76.042	ENSDNOG00000008719	PTCD2	100	76.042	Dasypus_novemcinctus
ENSTTRG00000011851	PTCD2	99	76.546	ENSDORG00000004921	Ptcd2	100	76.546	Dipodomys_ordii
ENSTTRG00000011851	PTCD2	100	69.487	ENSETEG00000016542	PTCD2	100	69.487	Echinops_telfairi
ENSTTRG00000011851	PTCD2	99	83.333	ENSEASG00005018038	PTCD2	100	83.333	Equus_asinus_asinus
ENSTTRG00000011851	PTCD2	99	82.902	ENSECAG00000007022	PTCD2	99	82.902	Equus_caballus
ENSTTRG00000011851	PTCD2	99	75.844	ENSEEUG00000014031	PTCD2	99	75.844	Erinaceus_europaeus
ENSTTRG00000011851	PTCD2	92	50.556	ENSELUG00000003584	ptcd2	94	50.556	Esox_lucius
ENSTTRG00000011851	PTCD2	99	75.515	ENSFCAG00000045432	PTCD2	83	75.515	Felis_catus
ENSTTRG00000011851	PTCD2	84	51.682	ENSFALG00000010299	PTCD2	99	51.682	Ficedula_albicollis
ENSTTRG00000011851	PTCD2	99	75.065	ENSFDAG00000018461	PTCD2	100	75.065	Fukomys_damarensis
ENSTTRG00000011851	PTCD2	94	48.533	ENSGMOG00000003637	ptcd2	97	48.533	Gadus_morhua
ENSTTRG00000011851	PTCD2	91	50.708	ENSGALG00000038260	PTCD2	95	50.409	Gallus_gallus
ENSTTRG00000011851	PTCD2	99	55.527	ENSGAGG00000021952	PTCD2	99	55.527	Gopherus_agassizii
ENSTTRG00000011851	PTCD2	99	82.429	ENSGGOG00000010695	PTCD2	99	82.429	Gorilla_gorilla
ENSTTRG00000011851	PTCD2	89	45.977	ENSHBUG00000009191	ptcd2	89	45.977	Haplochromis_burtoni
ENSTTRG00000011851	PTCD2	99	74.479	ENSHGLG00000001234	PTCD2	100	74.479	Heterocephalus_glaber_female
ENSTTRG00000011851	PTCD2	99	74.740	ENSHGLG00100015419	PTCD2	100	74.740	Heterocephalus_glaber_male
ENSTTRG00000011851	PTCD2	95	47.011	ENSHCOG00000001703	ptcd2	94	47.011	Hippocampus_comes
ENSTTRG00000011851	PTCD2	84	45.872	ENSIPUG00000006080	ptcd2	91	45.845	Ictalurus_punctatus
ENSTTRG00000011851	PTCD2	98	79.896	ENSSTOG00000006596	PTCD2	99	79.896	Ictidomys_tridecemlineatus
ENSTTRG00000011851	PTCD2	99	77.083	ENSJJAG00000024388	Ptcd2	100	77.083	Jaculus_jaculus
ENSTTRG00000011851	PTCD2	90	43.714	ENSKMAG00000009329	ptcd2	91	43.714	Kryptolebias_marmoratus
ENSTTRG00000011851	PTCD2	89	47.399	ENSLBEG00000024871	ptcd2	88	47.399	Labrus_bergylta
ENSTTRG00000011851	PTCD2	94	54.620	ENSLOCG00000011122	ptcd2	95	54.620	Lepisosteus_oculatus
ENSTTRG00000011851	PTCD2	80	79.421	ENSLAFG00000004115	PTCD2	99	79.421	Loxodonta_africana
ENSTTRG00000011851	PTCD2	99	79.587	ENSMFAG00000031516	PTCD2	99	79.587	Macaca_fascicularis
ENSTTRG00000011851	PTCD2	99	79.948	ENSMNEG00000007537	PTCD2	100	79.948	Macaca_nemestrina
ENSTTRG00000011851	PTCD2	99	79.587	ENSMLEG00000031093	PTCD2	99	79.587	Mandrillus_leucophaeus
ENSTTRG00000011851	PTCD2	93	48.611	ENSMAMG00000018529	ptcd2	94	48.611	Mastacembelus_armatus
ENSTTRG00000011851	PTCD2	89	45.977	ENSMZEG00005003625	ptcd2	89	45.977	Maylandia_zebra
ENSTTRG00000011851	PTCD2	89	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSTTRG00000011851	PTCD2	99	58.656	ENSMAUG00000020253	Ptcd2	100	58.656	Mesocricetus_auratus
ENSTTRG00000011851	PTCD2	100	78.663	ENSMICG00000004535	PTCD2	100	78.663	Microcebus_murinus
ENSTTRG00000011851	PTCD2	99	73.177	ENSMOCG00000019985	Ptcd2	100	73.177	Microtus_ochrogaster
ENSTTRG00000011851	PTCD2	94	58.311	ENSMODG00000001695	PTCD2	96	58.311	Monodelphis_domestica
ENSTTRG00000011851	PTCD2	94	47.721	ENSMALG00000022372	ptcd2	97	47.721	Monopterus_albus
ENSTTRG00000011851	PTCD2	99	71.354	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.354	Mus_caroli
ENSTTRG00000011851	PTCD2	99	71.094	ENSMUSG00000021650	Ptcd2	100	71.094	Mus_musculus
ENSTTRG00000011851	PTCD2	99	73.698	MGP_PahariEiJ_G0015904	Ptcd2	100	73.698	Mus_pahari
ENSTTRG00000011851	PTCD2	99	71.615	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.615	Mus_spretus
ENSTTRG00000011851	PTCD2	99	82.292	ENSMPUG00000014401	PTCD2	100	82.292	Mustela_putorius_furo
ENSTTRG00000011851	PTCD2	100	81.748	ENSMLUG00000007374	PTCD2	100	81.748	Myotis_lucifugus
ENSTTRG00000011851	PTCD2	95	74.394	ENSNGAG00000005027	Ptcd2	97	74.394	Nannospalax_galili
ENSTTRG00000011851	PTCD2	89	46.264	ENSNBRG00000008174	ptcd2	91	46.264	Neolamprologus_brichardi
ENSTTRG00000011851	PTCD2	85	46.667	ENSNBRG00000000092	-	100	46.667	Neolamprologus_brichardi
ENSTTRG00000011851	PTCD2	99	81.137	ENSNLEG00000004516	PTCD2	99	81.137	Nomascus_leucogenys
ENSTTRG00000011851	PTCD2	61	78.528	ENSMEUG00000014012	-	65	75.000	Notamacropus_eugenii
ENSTTRG00000011851	PTCD2	99	73.779	ENSOPRG00000007290	PTCD2	99	73.779	Ochotona_princeps
ENSTTRG00000011851	PTCD2	99	76.302	ENSODEG00000016417	PTCD2	100	76.302	Octodon_degus
ENSTTRG00000011851	PTCD2	71	49.819	ENSONIG00000011269	ptcd2	81	49.819	Oreochromis_niloticus
ENSTTRG00000011851	PTCD2	94	78.022	ENSOCUG00000007970	PTCD2	100	76.302	Oryctolagus_cuniculus
ENSTTRG00000011851	PTCD2	96	41.398	ENSORLG00000003851	ptcd2	88	46.377	Oryzias_latipes
ENSTTRG00000011851	PTCD2	89	46.377	ENSORLG00020009823	ptcd2	90	46.377	Oryzias_latipes_hni
ENSTTRG00000011851	PTCD2	89	45.507	ENSORLG00015016777	ptcd2	99	45.507	Oryzias_latipes_hsok
ENSTTRG00000011851	PTCD2	89	45.217	ENSOMEG00000012396	ptcd2	84	45.217	Oryzias_melastigma
ENSTTRG00000011851	PTCD2	100	73.779	ENSOGAG00000008390	PTCD2	100	73.779	Otolemur_garnettii
ENSTTRG00000011851	PTCD2	99	88.660	ENSOARG00000005087	PTCD2	99	88.660	Ovis_aries
ENSTTRG00000011851	PTCD2	99	82.429	ENSPPAG00000028480	PTCD2	99	82.429	Pan_paniscus
ENSTTRG00000011851	PTCD2	99	81.912	ENSPTRG00000016968	PTCD2	99	81.912	Pan_troglodytes
ENSTTRG00000011851	PTCD2	89	82.609	ENSPANG00000006611	PTCD2	89	82.609	Papio_anubis
ENSTTRG00000011851	PTCD2	91	49.438	ENSPKIG00000019896	ptcd2	93	49.438	Paramormyrops_kingsleyae
ENSTTRG00000011851	PTCD2	80	60.323	ENSPSIG00000014559	PTCD2	96	60.323	Pelodiscus_sinensis
ENSTTRG00000011851	PTCD2	99	73.834	ENSPEMG00000000884	Ptcd2	100	73.834	Peromyscus_maniculatus_bairdii
ENSTTRG00000011851	PTCD2	99	59.115	ENSPCIG00000029047	PTCD2	100	59.115	Phascolarctos_cinereus
ENSTTRG00000011851	PTCD2	84	46.012	ENSPLAG00000010456	ptcd2	91	45.821	Poecilia_latipinna
ENSTTRG00000011851	PTCD2	89	46.110	ENSPREG00000021797	ptcd2	88	46.110	Poecilia_reticulata
ENSTTRG00000011851	PTCD2	100	70.951	ENSPPYG00000015543	PTCD2	100	70.951	Pongo_abelii
ENSTTRG00000011851	PTCD2	81	66.134	ENSPCAG00000006806	PTCD2	99	66.134	Procavia_capensis
ENSTTRG00000011851	PTCD2	99	83.763	ENSPVAG00000010935	PTCD2	99	83.763	Pteropus_vampyrus
ENSTTRG00000011851	PTCD2	89	45.977	ENSPNYG00000003122	ptcd2	89	45.977	Pundamilia_nyererei
ENSTTRG00000011851	PTCD2	92	49.724	ENSPNAG00000021490	ptcd2	94	50.000	Pygocentrus_nattereri
ENSTTRG00000011851	PTCD2	99	72.727	ENSRNOG00000028403	Ptcd2	100	72.727	Rattus_norvegicus
ENSTTRG00000011851	PTCD2	99	74.419	ENSRBIG00000032929	PTCD2	99	74.419	Rhinopithecus_bieti
ENSTTRG00000011851	PTCD2	99	79.948	ENSRROG00000000080	PTCD2	100	79.948	Rhinopithecus_roxellana
ENSTTRG00000011851	PTCD2	99	80.729	ENSSBOG00000018911	PTCD2	100	80.729	Saimiri_boliviensis_boliviensis
ENSTTRG00000011851	PTCD2	94	62.125	ENSSHAG00000003833	PTCD2	95	62.125	Sarcophilus_harrisii
ENSTTRG00000011851	PTCD2	83	48.607	ENSSFOG00015015415	ptcd2	84	48.607	Scleropages_formosus
ENSTTRG00000011851	PTCD2	94	43.836	ENSSMAG00000010350	ptcd2	94	42.857	Scophthalmus_maximus
ENSTTRG00000011851	PTCD2	89	48.844	ENSSDUG00000008142	ptcd2	87	48.844	Seriola_dumerili
ENSTTRG00000011851	PTCD2	89	49.133	ENSSLDG00000015284	ptcd2	91	49.133	Seriola_lalandi_dorsalis
ENSTTRG00000011851	PTCD2	80	69.872	ENSSARG00000004983	PTCD2	99	69.872	Sorex_araneus
ENSTTRG00000011851	PTCD2	91	55.932	ENSSPUG00000000176	PTCD2	89	55.932	Sphenodon_punctatus
ENSTTRG00000011851	PTCD2	89	46.552	ENSSPAG00000008591	ptcd2	89	46.552	Stegastes_partitus
ENSTTRG00000011851	PTCD2	100	86.632	ENSSSCG00000016975	PTCD2	91	86.632	Sus_scrofa
ENSTTRG00000011851	PTCD2	89	50.867	ENSTGUG00000005705	PTCD2	99	50.867	Taeniopygia_guttata
ENSTTRG00000011851	PTCD2	100	77.121	ENSTBEG00000016559	PTCD2	100	77.121	Tupaia_belangeri
ENSTTRG00000011851	PTCD2	100	80.977	ENSUAMG00000007583	PTCD2	91	80.977	Ursus_americanus
ENSTTRG00000011851	PTCD2	99	81.250	ENSUMAG00000007666	PTCD2	100	81.250	Ursus_maritimus
ENSTTRG00000011851	PTCD2	99	86.598	ENSVPAG00000009597	PTCD2	99	86.598	Vicugna_pacos
ENSTTRG00000011851	PTCD2	95	80.863	ENSVVUG00000007299	-	97	80.863	Vulpes_vulpes
ENSTTRG00000011851	PTCD2	90	51.282	ENSXETG00000031652	PTCD2	92	51.282	Xenopus_tropicalis
ENSTTRG00000011851	PTCD2	84	46.319	ENSXMAG00000005940	ptcd2	82	45.821	Xiphophorus_maculatus