EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000011871 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 222857 bases
Position: chrGeneScaffold_3492:224481-447337
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000011265	S1	PF00575.23	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000011875	SRBD1-201	2982	-	ENSTTRP00000011265	993 (aa)	-	UPI00018B8C8F

Gene Model

Click here to download ENSTTRG00000011871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000011871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000011871	SRBD1	94	91.705	ENSG00000068784	SRBD1	94	91.705	Homo_sapiens
ENSTTRG00000011871	SRBD1	91	59.783	ENSAPOG00000005103	si:ch211-117n7.8	77	58.421	Acanthochromis_polyacanthus
ENSTTRG00000011871	SRBD1	94	93.548	ENSAMEG00000005993	SRBD1	94	93.548	Ailuropoda_melanoleuca
ENSTTRG00000011871	SRBD1	74	59.783	ENSACIG00000009875	si:ch211-117n7.8	77	59.788	Amphilophus_citrinellus
ENSTTRG00000011871	SRBD1	89	61.714	ENSAOCG00000024718	si:ch211-117n7.8	76	59.788	Amphiprion_ocellaris
ENSTTRG00000011871	SRBD1	88	59.259	ENSAPEG00000002645	si:ch211-117n7.8	91	59.259	Amphiprion_percula
ENSTTRG00000011871	SRBD1	76	58.844	ENSATEG00000010844	si:ch211-117n7.8	78	58.844	Anabas_testudineus
ENSTTRG00000011871	SRBD1	93	75.728	ENSAPLG00000006313	SRBD1	93	75.728	Anas_platyrhynchos
ENSTTRG00000011871	SRBD1	94	92.166	ENSANAG00000025573	SRBD1	94	92.166	Aotus_nancymaae
ENSTTRG00000011871	SRBD1	91	57.065	ENSACLG00000024219	si:ch211-117n7.8	88	53.810	Astatotilapia_calliptera
ENSTTRG00000011871	SRBD1	76	61.806	ENSAMXG00000004294	SRBD1	86	58.974	Astyanax_mexicanus
ENSTTRG00000011871	SRBD1	94	94.009	ENSBTAG00000007508	SRBD1	93	97.468	Bos_taurus
ENSTTRG00000011871	SRBD1	94	88.858	ENSCJAG00000000727	SRBD1	94	88.479	Callithrix_jacchus
ENSTTRG00000011871	SRBD1	94	93.088	ENSCAFG00000002554	SRBD1	94	93.088	Canis_familiaris
ENSTTRG00000011871	SRBD1	94	93.088	ENSCAFG00020026284	SRBD1	98	93.088	Canis_lupus_dingo
ENSTTRG00000011871	SRBD1	94	95.853	ENSCHIG00000016535	SRBD1	94	95.853	Capra_hircus
ENSTTRG00000011871	SRBD1	94	91.504	ENSTSYG00000012797	SRBD1	94	90.783	Carlito_syrichta
ENSTTRG00000011871	SRBD1	93	91.787	ENSCPOG00000004773	SRBD1	93	91.542	Cavia_porcellus
ENSTTRG00000011871	SRBD1	94	92.166	ENSCCAG00000025589	SRBD1	94	92.166	Cebus_capucinus
ENSTTRG00000011871	SRBD1	94	92.166	ENSCATG00000039530	SRBD1	94	92.166	Cercocebus_atys
ENSTTRG00000011871	SRBD1	94	92.627	ENSCLAG00000008623	SRBD1	94	92.627	Chinchilla_lanigera
ENSTTRG00000011871	SRBD1	94	92.166	ENSCSAG00000013350	SRBD1	94	92.166	Chlorocebus_sabaeus
ENSTTRG00000011871	SRBD1	82	95.541	ENSCHOG00000003805	SRBD1	82	95.541	Choloepus_hoffmanni
ENSTTRG00000011871	SRBD1	94	76.959	ENSCPBG00000005677	SRBD1	94	76.959	Chrysemys_picta_bellii
ENSTTRG00000011871	SRBD1	68	44.118	ENSCING00000005950	-	87	44.118	Ciona_intestinalis
ENSTTRG00000011871	SRBD1	69	46.422	ENSCSAVG00000000861	-	91	46.422	Ciona_savignyi
ENSTTRG00000011871	SRBD1	94	91.244	ENSCANG00000016307	SRBD1	94	91.244	Colobus_angolensis_palliatus
ENSTTRG00000011871	SRBD1	94	86.212	ENSCGRG00001000513	Srbd1	94	85.376	Cricetulus_griseus_chok1gshd
ENSTTRG00000011871	SRBD1	94	86.212	ENSCGRG00000002283	Srbd1	94	85.376	Cricetulus_griseus_crigri
ENSTTRG00000011871	SRBD1	93	53.398	ENSCSEG00000000856	si:ch211-117n7.8	79	58.176	Cynoglossus_semilaevis
ENSTTRG00000011871	SRBD1	75	58.217	ENSCVAG00000020212	si:ch211-117n7.8	91	57.672	Cyprinodon_variegatus
ENSTTRG00000011871	SRBD1	94	92.166	ENSDNOG00000018686	SRBD1	94	92.166	Dasypus_novemcinctus
ENSTTRG00000011871	SRBD1	94	87.169	ENSDORG00000010468	Srbd1	94	87.169	Dipodomys_ordii
ENSTTRG00000011871	SRBD1	90	32.930	FBgn0051156	CG31156	92	34.887	Drosophila_melanogaster
ENSTTRG00000011871	SRBD1	82	85.159	ENSETEG00000000739	SRBD1	85	85.159	Echinops_telfairi
ENSTTRG00000011871	SRBD1	65	51.747	ENSEBUG00000008902	si:ch211-117n7.8	86	51.747	Eptatretus_burgeri
ENSTTRG00000011871	SRBD1	94	93.548	ENSEASG00005003132	SRBD1	97	96.178	Equus_asinus_asinus
ENSTTRG00000011871	SRBD1	94	94.009	ENSECAG00000013865	SRBD1	92	94.009	Equus_caballus
ENSTTRG00000011871	SRBD1	88	57.436	ENSELUG00000012592	si:ch211-117n7.8	85	57.436	Esox_lucius
ENSTTRG00000011871	SRBD1	94	94.470	ENSFCAG00000005101	SRBD1	94	94.470	Felis_catus
ENSTTRG00000011871	SRBD1	91	76.316	ENSFALG00000012966	SRBD1	92	76.720	Ficedula_albicollis
ENSTTRG00000011871	SRBD1	90	92.857	ENSFDAG00000016670	SRBD1	91	92.857	Fukomys_damarensis
ENSTTRG00000011871	SRBD1	75	58.844	ENSFHEG00000019480	si:ch211-117n7.8	75	58.844	Fundulus_heteroclitus
ENSTTRG00000011871	SRBD1	93	76.098	ENSGALG00000009990	SRBD1	93	76.098	Gallus_gallus
ENSTTRG00000011871	SRBD1	75	57.968	ENSGAFG00000019664	si:ch211-117n7.8	76	57.968	Gambusia_affinis
ENSTTRG00000011871	SRBD1	53	66.763	ENSGACG00000010794	si:ch211-117n7.8	86	66.763	Gasterosteus_aculeatus
ENSTTRG00000011871	SRBD1	78	82.406	ENSGAGG00000006166	SRBD1	93	82.406	Gopherus_agassizii
ENSTTRG00000011871	SRBD1	91	92.627	ENSGGOG00000005910	SRBD1	93	92.627	Gorilla_gorilla
ENSTTRG00000011871	SRBD1	86	57.065	ENSHBUG00000013207	si:ch211-117n7.8	89	53.810	Haplochromis_burtoni
ENSTTRG00000011871	SRBD1	94	89.106	ENSHGLG00000018153	-	94	88.128	Heterocephalus_glaber_female
ENSTTRG00000011871	SRBD1	94	88.966	ENSHGLG00100015183	-	94	87.989	Heterocephalus_glaber_male
ENSTTRG00000011871	SRBD1	77	62.304	ENSIPUG00000009661	srbd1	78	62.304	Ictalurus_punctatus
ENSTTRG00000011871	SRBD1	94	91.244	ENSSTOG00000005898	SRBD1	94	91.244	Ictidomys_tridecemlineatus
ENSTTRG00000011871	SRBD1	94	82.949	ENSJJAG00000022244	Srbd1	94	82.949	Jaculus_jaculus
ENSTTRG00000011871	SRBD1	91	57.143	ENSKMAG00000003473	si:ch211-117n7.8	79	57.143	Kryptolebias_marmoratus
ENSTTRG00000011871	SRBD1	89	58.201	ENSLBEG00000027518	si:ch211-117n7.8	90	58.201	Labrus_bergylta
ENSTTRG00000011871	SRBD1	78	71.127	ENSLACG00000009790	SRBD1	92	71.127	Latimeria_chalumnae
ENSTTRG00000011871	SRBD1	90	60.465	ENSLOCG00000016360	si:ch211-117n7.8	90	60.465	Lepisosteus_oculatus
ENSTTRG00000011871	SRBD1	94	92.166	ENSMFAG00000042026	SRBD1	94	92.166	Macaca_fascicularis
ENSTTRG00000011871	SRBD1	94	92.166	ENSMMUG00000003490	SRBD1	94	92.166	Macaca_mulatta
ENSTTRG00000011871	SRBD1	94	92.166	ENSMNEG00000034701	SRBD1	94	92.166	Macaca_nemestrina
ENSTTRG00000011871	SRBD1	94	91.705	ENSMLEG00000000745	SRBD1	94	91.705	Mandrillus_leucophaeus
ENSTTRG00000011871	SRBD1	73	58.201	ENSMAMG00000021921	si:ch211-117n7.8	76	58.201	Mastacembelus_armatus
ENSTTRG00000011871	SRBD1	91	57.065	ENSMZEG00005027369	si:ch211-117n7.8	88	53.810	Maylandia_zebra
ENSTTRG00000011871	SRBD1	73	75.769	ENSMGAG00000010273	SRBD1	91	75.769	Meleagris_gallopavo
ENSTTRG00000011871	SRBD1	75	84.071	ENSMAUG00000013916	Srbd1	92	84.071	Mesocricetus_auratus
ENSTTRG00000011871	SRBD1	94	93.548	ENSMICG00000007835	SRBD1	94	93.548	Microcebus_murinus
ENSTTRG00000011871	SRBD1	94	84.262	ENSMOCG00000018716	Srbd1	94	83.426	Microtus_ochrogaster
ENSTTRG00000011871	SRBD1	77	56.918	ENSMMOG00000007507	si:ch211-117n7.8	81	56.918	Mola_mola
ENSTTRG00000011871	SRBD1	90	57.609	ENSMALG00000001562	si:ch211-117n7.8	92	57.672	Monopterus_albus
ENSTTRG00000011871	SRBD1	94	81.337	MGP_CAROLIEiJ_G0021934	Srbd1	80	100.000	Mus_caroli
ENSTTRG00000011871	SRBD1	94	82.173	ENSMUSG00000024135	Srbd1	99	84.694	Mus_musculus
ENSTTRG00000011871	SRBD1	94	80.780	MGP_PahariEiJ_G0020924	Srbd1	94	79.944	Mus_pahari
ENSTTRG00000011871	SRBD1	94	82.451	MGP_SPRETEiJ_G0022850	Srbd1	94	81.476	Mus_spretus
ENSTTRG00000011871	SRBD1	94	89.554	ENSMLUG00000007039	SRBD1	94	88.579	Myotis_lucifugus
ENSTTRG00000011871	SRBD1	94	82.661	ENSNGAG00000011893	Srbd1	94	82.661	Nannospalax_galili
ENSTTRG00000011871	SRBD1	74	56.522	ENSNBRG00000012873	si:ch211-117n7.8	79	56.360	Neolamprologus_brichardi
ENSTTRG00000011871	SRBD1	94	91.705	ENSNLEG00000016877	SRBD1	94	91.705	Nomascus_leucogenys
ENSTTRG00000011871	SRBD1	92	92.537	ENSODEG00000012095	SRBD1	93	92.537	Octodon_degus
ENSTTRG00000011871	SRBD1	91	57.065	ENSONIG00000000945	si:ch211-117n7.8	91	59.820	Oreochromis_niloticus
ENSTTRG00000011871	SRBD1	93	93.720	ENSOCUG00000015385	SRBD1	94	92.166	Oryctolagus_cuniculus
ENSTTRG00000011871	SRBD1	91	49.528	ENSORLG00000004427	si:ch211-117n7.8	75	57.951	Oryzias_latipes
ENSTTRG00000011871	SRBD1	90	58.289	ENSORLG00020012792	si:ch211-117n7.8	76	57.848	Oryzias_latipes_hni
ENSTTRG00000011871	SRBD1	93	54.762	ENSORLG00015018598	si:ch211-117n7.8	76	57.774	Oryzias_latipes_hsok
ENSTTRG00000011871	SRBD1	85	58.286	ENSOMEG00000012229	si:ch211-117n7.8	87	51.675	Oryzias_melastigma
ENSTTRG00000011871	SRBD1	94	88.940	ENSOGAG00000001076	SRBD1	94	88.940	Otolemur_garnettii
ENSTTRG00000011871	SRBD1	94	95.853	ENSOARG00000005958	SRBD1	94	95.853	Ovis_aries
ENSTTRG00000011871	SRBD1	94	91.705	ENSPPAG00000038442	SRBD1	94	91.705	Pan_paniscus
ENSTTRG00000011871	SRBD1	94	94.470	ENSPPRG00000003449	SRBD1	94	94.470	Panthera_pardus
ENSTTRG00000011871	SRBD1	94	94.470	ENSPTIG00000012495	SRBD1	94	94.470	Panthera_tigris_altaica
ENSTTRG00000011871	SRBD1	94	92.166	ENSPTRG00000011889	SRBD1	94	92.166	Pan_troglodytes
ENSTTRG00000011871	SRBD1	94	91.705	ENSPANG00000008063	SRBD1	94	91.705	Papio_anubis
ENSTTRG00000011871	SRBD1	77	62.703	ENSPKIG00000021973	si:ch211-117n7.8	79	62.703	Paramormyrops_kingsleyae
ENSTTRG00000011871	SRBD1	93	76.667	ENSPSIG00000008992	SRBD1	93	76.667	Pelodiscus_sinensis
ENSTTRG00000011871	SRBD1	79	58.286	ENSPMGG00000013348	si:ch211-117n7.8	91	55.330	Periophthalmus_magnuspinnatus
ENSTTRG00000011871	SRBD1	94	82.321	ENSPEMG00000020684	Srbd1	94	82.028	Peromyscus_maniculatus_bairdii
ENSTTRG00000011871	SRBD1	87	57.292	ENSPFOG00000010650	si:ch211-117n7.8	86	57.292	Poecilia_formosa
ENSTTRG00000011871	SRBD1	75	58.494	ENSPLAG00000002141	si:ch211-117n7.8	76	58.494	Poecilia_latipinna
ENSTTRG00000011871	SRBD1	87	57.812	ENSPMEG00000018537	si:ch211-117n7.8	86	57.812	Poecilia_mexicana
ENSTTRG00000011871	SRBD1	75	58.144	ENSPREG00000003258	si:ch211-117n7.8	78	58.144	Poecilia_reticulata
ENSTTRG00000011871	SRBD1	94	91.705	ENSPPYG00000012444	SRBD1	93	91.705	Pongo_abelii
ENSTTRG00000011871	SRBD1	74	88.636	ENSPCAG00000005629	SRBD1	79	88.636	Procavia_capensis
ENSTTRG00000011871	SRBD1	94	92.166	ENSPCOG00000017669	SRBD1	94	92.166	Propithecus_coquereli
ENSTTRG00000011871	SRBD1	94	90.783	ENSPVAG00000001782	SRBD1	94	90.783	Pteropus_vampyrus
ENSTTRG00000011871	SRBD1	86	57.065	ENSPNYG00000000508	si:ch211-117n7.8	90	53.810	Pundamilia_nyererei
ENSTTRG00000011871	SRBD1	78	61.932	ENSPNAG00000013492	SRBD1	84	59.935	Pygocentrus_nattereri
ENSTTRG00000011871	SRBD1	94	80.641	ENSRNOG00000014720	Srbd1	93	80.641	Rattus_norvegicus
ENSTTRG00000011871	SRBD1	94	91.244	ENSRBIG00000033486	SRBD1	94	91.244	Rhinopithecus_bieti
ENSTTRG00000011871	SRBD1	94	91.244	ENSRROG00000041599	SRBD1	94	91.244	Rhinopithecus_roxellana
ENSTTRG00000011871	SRBD1	94	92.166	ENSSBOG00000024982	SRBD1	94	92.166	Saimiri_boliviensis_boliviensis
ENSTTRG00000011871	SRBD1	76	61.837	ENSSFOG00015001128	si:ch211-117n7.8	85	61.837	Scleropages_formosus
ENSTTRG00000011871	SRBD1	74	59.239	ENSSMAG00000018256	si:ch211-117n7.8	74	59.259	Scophthalmus_maximus
ENSTTRG00000011871	SRBD1	75	58.566	ENSSLDG00000023189	si:ch211-117n7.8	75	58.566	Seriola_lalandi_dorsalis
ENSTTRG00000011871	SRBD1	94	82.949	ENSSARG00000009740	SRBD1	94	82.949	Sorex_araneus
ENSTTRG00000011871	SRBD1	83	76.410	ENSSPUG00000010475	SRBD1	92	76.410	Sphenodon_punctatus
ENSTTRG00000011871	SRBD1	74	58.696	ENSSPAG00000008092	-	90	56.650	Stegastes_partitus
ENSTTRG00000011871	SRBD1	94	95.392	ENSSSCG00000008445	SRBD1	98	95.392	Sus_scrofa
ENSTTRG00000011871	SRBD1	77	80.289	ENSTGUG00000003878	SRBD1	92	80.289	Taeniopygia_guttata
ENSTTRG00000011871	SRBD1	89	60.000	ENSTRUG00000007080	si:ch211-117n7.8	85	58.566	Takifugu_rubripes
ENSTTRG00000011871	SRBD1	91	55.155	ENSTNIG00000007464	si:ch211-117n7.8	92	55.155	Tetraodon_nigroviridis
ENSTTRG00000011871	SRBD1	75	98.947	ENSTBEG00000004556	SRBD1	75	98.947	Tupaia_belangeri
ENSTTRG00000011871	SRBD1	94	94.470	ENSUAMG00000008126	SRBD1	98	94.470	Ursus_americanus
ENSTTRG00000011871	SRBD1	94	94.470	ENSUMAG00000012902	SRBD1	92	94.470	Ursus_maritimus
ENSTTRG00000011871	SRBD1	85	95.392	ENSVPAG00000006825	SRBD1	93	95.392	Vicugna_pacos
ENSTTRG00000011871	SRBD1	94	93.088	ENSVVUG00000005389	SRBD1	93	95.570	Vulpes_vulpes
ENSTTRG00000011871	SRBD1	87	66.848	ENSXETG00000002760	srbd1	86	66.154	Xenopus_tropicalis
ENSTTRG00000011871	SRBD1	90	56.771	ENSXMAG00000016861	si:ch211-117n7.8	76	57.968	Xiphophorus_maculatus