EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000012221 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 44658 bases
Position: chrGeneScaffold_3616:268877-313534
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000011591	DUF1604	PF07713.13	6.8e-36	1	1
ENSTTRP00000011591	G-patch	PF01585.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000012222	GPATCH1-201	2802	-	ENSTTRP00000011591	933 (aa)	-	UPI00018B7B41

Gene Model

Click here to download ENSTTRG00000012221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000012221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000012221	GPATCH1	100	80.876	ENSG00000076650	GPATCH1	91	80.188	Homo_sapiens
ENSTTRG00000012221	GPATCH1	100	83.422	ENSAMEG00000015575	GPATCH1	99	83.297	Ailuropoda_melanoleuca
ENSTTRG00000012221	GPATCH1	75	69.318	ENSAOCG00000006668	gpatch1	84	63.121	Amphiprion_ocellaris
ENSTTRG00000012221	GPATCH1	75	64.057	ENSAPEG00000000026	gpatch1	84	64.057	Amphiprion_percula
ENSTTRG00000012221	GPATCH1	89	44.824	ENSATEG00000014494	gpatch1	89	46.084	Anabas_testudineus
ENSTTRG00000012221	GPATCH1	90	55.902	ENSAPLG00000007584	GPATCH1	96	55.390	Anas_platyrhynchos
ENSTTRG00000012221	GPATCH1	100	80.662	ENSANAG00000027002	GPATCH1	91	80.188	Aotus_nancymaae
ENSTTRG00000012221	GPATCH1	81	47.891	ENSACLG00000024740	gpatch1	82	48.477	Astatotilapia_calliptera
ENSTTRG00000012221	GPATCH1	93	46.902	ENSAMXG00000020177	gpatch1	93	65.035	Astyanax_mexicanus
ENSTTRG00000012221	GPATCH1	91	83.822	ENSBTAG00000000721	GPATCH1	91	83.822	Bos_taurus
ENSTTRG00000012221	GPATCH1	61	37.131	WBGene00011109	R07E5.1	68	37.131	Caenorhabditis_elegans
ENSTTRG00000012221	GPATCH1	100	80.128	ENSCJAG00000000684	GPATCH1	91	79.601	Callithrix_jacchus
ENSTTRG00000012221	GPATCH1	100	82.585	ENSCAFG00000007457	GPATCH1	83	82.449	Canis_familiaris
ENSTTRG00000012221	GPATCH1	94	81.870	ENSCAFG00020019731	GPATCH1	91	81.712	Canis_lupus_dingo
ENSTTRG00000012221	GPATCH1	99	84.341	ENSCHIG00000019626	GPATCH1	92	84.174	Capra_hircus
ENSTTRG00000012221	GPATCH1	97	71.789	ENSCAPG00000008827	GPATCH1	91	71.807	Cavia_aperea
ENSTTRG00000012221	GPATCH1	100	74.094	ENSCPOG00000024477	GPATCH1	91	74.503	Cavia_porcellus
ENSTTRG00000012221	GPATCH1	100	80.235	ENSCCAG00000024676	GPATCH1	91	79.953	Cebus_capucinus
ENSTTRG00000012221	GPATCH1	100	81.003	ENSCATG00000043637	GPATCH1	91	80.188	Cercocebus_atys
ENSTTRG00000012221	GPATCH1	96	76.004	ENSCLAG00000003395	-	92	75.820	Chinchilla_lanigera
ENSTTRG00000012221	GPATCH1	100	78.312	ENSCSAG00000004743	GPATCH1	99	78.680	Chlorocebus_sabaeus
ENSTTRG00000012221	GPATCH1	92	80.623	ENSCHOG00000012865	GPATCH1	89	84.109	Choloepus_hoffmanni
ENSTTRG00000012221	GPATCH1	78	61.737	ENSCPBG00000000666	GPATCH1	92	61.444	Chrysemys_picta_bellii
ENSTTRG00000012221	GPATCH1	68	33.951	ENSCING00000012518	-	67	42.657	Ciona_intestinalis
ENSTTRG00000012221	GPATCH1	88	85.222	ENSCANG00000012540	GPATCH1	89	84.830	Colobus_angolensis_palliatus
ENSTTRG00000012221	GPATCH1	97	74.671	ENSCGRG00001016736	Gpatch1	99	74.416	Cricetulus_griseus_chok1gshd
ENSTTRG00000012221	GPATCH1	74	88.525	ENSCGRG00000005069	Gpatch1	80	88.525	Cricetulus_griseus_crigri
ENSTTRG00000012221	GPATCH1	69	60.714	ENSCSEG00000019456	-	80	63.107	Cynoglossus_semilaevis
ENSTTRG00000012221	GPATCH1	81	47.985	ENSDARG00000033418	gpatch1	85	61.786	Danio_rerio
ENSTTRG00000012221	GPATCH1	91	78.664	ENSDNOG00000005291	GPATCH1	95	78.664	Dasypus_novemcinctus
ENSTTRG00000012221	GPATCH1	93	73.502	ENSDORG00000012546	Gpatch1	94	73.341	Dipodomys_ordii
ENSTTRG00000012221	GPATCH1	99	69.438	ENSETEG00000003626	GPATCH1	92	69.168	Echinops_telfairi
ENSTTRG00000012221	GPATCH1	83	47.012	ENSEBUG00000011286	gpatch1	81	47.809	Eptatretus_burgeri
ENSTTRG00000012221	GPATCH1	99	80.108	ENSEASG00005021162	GPATCH1	93	82.156	Equus_asinus_asinus
ENSTTRG00000012221	GPATCH1	94	82.534	ENSECAG00000022743	GPATCH1	88	82.277	Equus_caballus
ENSTTRG00000012221	GPATCH1	72	77.941	ENSEEUG00000012925	GPATCH1	72	77.941	Erinaceus_europaeus
ENSTTRG00000012221	GPATCH1	93	59.286	ENSELUG00000018195	gpatch1	84	60.357	Esox_lucius
ENSTTRG00000012221	GPATCH1	100	82.246	ENSFCAG00000014917	GPATCH1	99	82.104	Felis_catus
ENSTTRG00000012221	GPATCH1	99	57.037	ENSFALG00000007821	GPATCH1	89	57.783	Ficedula_albicollis
ENSTTRG00000012221	GPATCH1	96	75.222	ENSFDAG00000003871	GPATCH1	92	75.061	Fukomys_damarensis
ENSTTRG00000012221	GPATCH1	76	44.242	ENSGMOG00000003830	gpatch1	91	48.588	Gadus_morhua
ENSTTRG00000012221	GPATCH1	92	56.800	ENSGALG00000004839	GPATCH1	92	57.295	Gallus_gallus
ENSTTRG00000012221	GPATCH1	86	57.143	ENSGACG00000017544	gpatch1	89	57.143	Gasterosteus_aculeatus
ENSTTRG00000012221	GPATCH1	99	58.879	ENSGAGG00000010067	GPATCH1	90	58.038	Gopherus_agassizii
ENSTTRG00000012221	GPATCH1	97	81.120	ENSGGOG00000010862	GPATCH1	91	80.435	Gorilla_gorilla
ENSTTRG00000012221	GPATCH1	81	47.886	ENSHBUG00000023462	gpatch1	90	46.659	Haplochromis_burtoni
ENSTTRG00000012221	GPATCH1	89	91.154	ENSHGLG00000009334	GPATCH1	92	91.154	Heterocephalus_glaber_female
ENSTTRG00000012221	GPATCH1	89	91.373	ENSHGLG00100018074	GPATCH1	91	91.373	Heterocephalus_glaber_male
ENSTTRG00000012221	GPATCH1	87	66.308	ENSIPUG00000014977	gpatch1	84	66.308	Ictalurus_punctatus
ENSTTRG00000012221	GPATCH1	100	79.380	ENSSTOG00000003720	GPATCH1	99	79.180	Ictidomys_tridecemlineatus
ENSTTRG00000012221	GPATCH1	91	75.822	ENSJJAG00000023765	Gpatch1	91	75.822	Jaculus_jaculus
ENSTTRG00000012221	GPATCH1	89	46.333	ENSKMAG00000017950	gpatch1	89	46.279	Kryptolebias_marmoratus
ENSTTRG00000012221	GPATCH1	75	58.657	ENSLBEG00000026527	gpatch1	82	60.777	Labrus_bergylta
ENSTTRG00000012221	GPATCH1	88	54.167	ENSLACG00000008130	GPATCH1	90	54.459	Latimeria_chalumnae
ENSTTRG00000012221	GPATCH1	81	51.554	ENSLOCG00000001800	gpatch1	90	49.943	Lepisosteus_oculatus
ENSTTRG00000012221	GPATCH1	99	81.128	ENSLAFG00000013589	GPATCH1	99	81.128	Loxodonta_africana
ENSTTRG00000012221	GPATCH1	91	79.647	ENSMFAG00000034418	GPATCH1	96	79.647	Macaca_fascicularis
ENSTTRG00000012221	GPATCH1	100	80.576	ENSMMUG00000011790	GPATCH1	92	79.859	Macaca_mulatta
ENSTTRG00000012221	GPATCH1	100	80.235	ENSMNEG00000045084	GPATCH1	91	79.484	Macaca_nemestrina
ENSTTRG00000012221	GPATCH1	100	69.872	ENSMLEG00000043840	GPATCH1	90	68.113	Mandrillus_leucophaeus
ENSTTRG00000012221	GPATCH1	81	47.643	ENSMZEG00005001926	gpatch1	82	48.234	Maylandia_zebra
ENSTTRG00000012221	GPATCH1	89	57.533	ENSMGAG00000005775	GPATCH1	89	57.500	Meleagris_gallopavo
ENSTTRG00000012221	GPATCH1	90	75.501	ENSMICG00000004829	GPATCH1	88	84.211	Microcebus_murinus
ENSTTRG00000012221	GPATCH1	99	74.356	ENSMOCG00000000174	Gpatch1	92	74.212	Microtus_ochrogaster
ENSTTRG00000012221	GPATCH1	73	61.977	ENSMMOG00000002140	gpatch1	82	63.878	Mola_mola
ENSTTRG00000012221	GPATCH1	91	66.354	ENSMODG00000012226	GPATCH1	90	66.197	Monodelphis_domestica
ENSTTRG00000012221	GPATCH1	92	64.286	ENSMALG00000014386	gpatch1	90	46.101	Monopterus_albus
ENSTTRG00000012221	GPATCH1	100	77.195	ENSMUSG00000063808	Gpatch1	100	90.816	Mus_musculus
ENSTTRG00000012221	GPATCH1	100	76.709	MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	Mus_pahari
ENSTTRG00000012221	GPATCH1	100	76.364	MGP_SPRETEiJ_G0030681	Gpatch1	100	91.837	Mus_spretus
ENSTTRG00000012221	GPATCH1	100	82.032	ENSMPUG00000007658	GPATCH1	99	81.996	Mustela_putorius_furo
ENSTTRG00000012221	GPATCH1	100	77.540	ENSMLUG00000012161	GPATCH1	91	81.338	Myotis_lucifugus
ENSTTRG00000012221	GPATCH1	100	76.150	ENSNGAG00000012455	Gpatch1	91	76.526	Nannospalax_galili
ENSTTRG00000012221	GPATCH1	100	80.449	ENSNLEG00000007659	GPATCH1	91	79.836	Nomascus_leucogenys
ENSTTRG00000012221	GPATCH1	78	60.739	ENSMEUG00000015174	GPATCH1	78	60.602	Notamacropus_eugenii
ENSTTRG00000012221	GPATCH1	99	74.439	ENSODEG00000007103	GPATCH1	99	75.242	Octodon_degus
ENSTTRG00000012221	GPATCH1	81	49.357	ENSONIG00000003302	gpatch1	91	47.730	Oreochromis_niloticus
ENSTTRG00000012221	GPATCH1	99	64.599	ENSOANG00000012732	GPATCH1	90	66.118	Ornithorhynchus_anatinus
ENSTTRG00000012221	GPATCH1	100	80.642	ENSOCUG00000015905	GPATCH1	99	80.911	Oryctolagus_cuniculus
ENSTTRG00000012221	GPATCH1	90	45.581	ENSORLG00000018706	gpatch1	88	45.116	Oryzias_latipes
ENSTTRG00000012221	GPATCH1	90	43.945	ENSOMEG00000022688	gpatch1	90	44.688	Oryzias_melastigma
ENSTTRG00000012221	GPATCH1	85	79.471	ENSOGAG00000004016	GPATCH1	100	79.471	Otolemur_garnettii
ENSTTRG00000012221	GPATCH1	98	83.751	ENSOARG00000004365	GPATCH1	91	83.491	Ovis_aries
ENSTTRG00000012221	GPATCH1	100	80.769	ENSPPAG00000020990	GPATCH1	91	80.070	Pan_paniscus
ENSTTRG00000012221	GPATCH1	100	82.460	ENSPPRG00000017245	GPATCH1	99	82.321	Panthera_pardus
ENSTTRG00000012221	GPATCH1	100	83.316	ENSPTIG00000019649	GPATCH1	91	82.746	Panthera_tigris_altaica
ENSTTRG00000012221	GPATCH1	100	80.662	ENSPTRG00000010803	GPATCH1	91	79.953	Pan_troglodytes
ENSTTRG00000012221	GPATCH1	91	79.953	ENSPANG00000012374	GPATCH1	95	79.953	Papio_anubis
ENSTTRG00000012221	GPATCH1	80	50.893	ENSPKIG00000020745	gpatch1	75	65.108	Paramormyrops_kingsleyae
ENSTTRG00000012221	GPATCH1	99	58.955	ENSPSIG00000013433	GPATCH1	90	58.216	Pelodiscus_sinensis
ENSTTRG00000012221	GPATCH1	100	75.401	ENSPEMG00000000636	Gpatch1	91	75.352	Peromyscus_maniculatus_bairdii
ENSTTRG00000012221	GPATCH1	91	66.863	ENSPCIG00000021003	GPATCH1	95	66.863	Phascolarctos_cinereus
ENSTTRG00000012221	GPATCH1	64	54.902	ENSPREG00000008264	gpatch1	88	54.902	Poecilia_reticulata
ENSTTRG00000012221	GPATCH1	94	91.228	ENSPPYG00000009824	GPATCH1	87	91.228	Pongo_abelii
ENSTTRG00000012221	GPATCH1	82	79.048	ENSPCAG00000005931	GPATCH1	91	80.287	Procavia_capensis
ENSTTRG00000012221	GPATCH1	93	74.053	ENSPCOG00000009674	GPATCH1	97	75.147	Propithecus_coquereli
ENSTTRG00000012221	GPATCH1	91	87.719	ENSPVAG00000017767	GPATCH1	91	87.719	Pteropus_vampyrus
ENSTTRG00000012221	GPATCH1	81	47.690	ENSPNYG00000018189	gpatch1	91	48.712	Pundamilia_nyererei
ENSTTRG00000012221	GPATCH1	84	63.636	ENSPNAG00000013187	gpatch1	85	63.986	Pygocentrus_nattereri
ENSTTRG00000012221	GPATCH1	100	76.552	ENSRNOG00000011584	Gpatch1	91	76.381	Rattus_norvegicus
ENSTTRG00000012221	GPATCH1	100	73.426	ENSRBIG00000034723	GPATCH1	92	73.176	Rhinopithecus_bieti
ENSTTRG00000012221	GPATCH1	100	80.876	ENSRROG00000024428	GPATCH1	91	80.188	Rhinopithecus_roxellana
ENSTTRG00000012221	GPATCH1	100	77.137	ENSSBOG00000034650	GPATCH1	91	79.953	Saimiri_boliviensis_boliviensis
ENSTTRG00000012221	GPATCH1	99	67.410	ENSSHAG00000016016	GPATCH1	90	67.450	Sarcophilus_harrisii
ENSTTRG00000012221	GPATCH1	75	65.108	ENSSFOG00015011535	gpatch1	83	65.035	Scleropages_formosus
ENSTTRG00000012221	GPATCH1	81	43.293	ENSSMAG00000002883	gpatch1	93	42.167	Scophthalmus_maximus
ENSTTRG00000012221	GPATCH1	75	61.189	ENSSDUG00000007444	gpatch1	84	62.587	Seriola_dumerili
ENSTTRG00000012221	GPATCH1	75	62.143	ENSSLDG00000002856	gpatch1	87	63.571	Seriola_lalandi_dorsalis
ENSTTRG00000012221	GPATCH1	72	74.889	ENSSARG00000004108	GPATCH1	72	74.742	Sorex_araneus
ENSTTRG00000012221	GPATCH1	91	84.525	ENSSSCG00000002865	GPATCH1	94	84.525	Sus_scrofa
ENSTTRG00000012221	GPATCH1	98	58.415	ENSTGUG00000009401	GPATCH1	91	57.210	Taeniopygia_guttata
ENSTTRG00000012221	GPATCH1	75	58.741	ENSTRUG00000025081	gpatch1	84	58.741	Takifugu_rubripes
ENSTTRG00000012221	GPATCH1	75	58.741	ENSTRUG00000005785	-	84	58.741	Takifugu_rubripes
ENSTTRG00000012221	GPATCH1	75	60.554	ENSTNIG00000002554	gpatch1	92	62.284	Tetraodon_nigroviridis
ENSTTRG00000012221	GPATCH1	62	71.859	ENSTBEG00000007750	-	81	71.679	Tupaia_belangeri
ENSTTRG00000012221	GPATCH1	99	79.270	ENSUMAG00000014645	GPATCH1	98	81.763	Ursus_maritimus
ENSTTRG00000012221	GPATCH1	74	95.429	ENSVPAG00000010313	GPATCH1	80	95.628	Vicugna_pacos
ENSTTRG00000012221	GPATCH1	94	81.870	ENSVVUG00000016572	GPATCH1	91	81.712	Vulpes_vulpes
ENSTTRG00000012221	GPATCH1	99	45.654	ENSXETG00000018276	gpatch1	93	46.675	Xenopus_tropicalis