EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000012243 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 12094 bases
Position: chrGeneScaffold_3475:65422-77515
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000011616	tRNA-synt_1g	PF09334.11	1.6e-10	1	1
ENSTTRP00000011616	Anticodon_1	PF08264.13	5e-30	1	1
ENSTTRP00000011616	tRNA-synt_1	PF00133.22	1.8e-126	1	3
ENSTTRP00000011616	tRNA-synt_1	PF00133.22	1.8e-126	2	3
ENSTTRP00000011616	tRNA-synt_1	PF00133.22	1.8e-126	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000012247	VARS2-201	3120	-	ENSTTRP00000011616	1039 (aa)	-	UPI00018B5974

Gene Model

Click here to download ENSTTRG00000012243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000012243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000012243	VARS2	73	71.774	ENSTTRG00000014128	VARS	61	71.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000012243	VARS2	77	56.173	ENSAPOG00000007396	vars2	80	49.767	Acanthochromis_polyacanthus
ENSTTRG00000012243	VARS2	99	75.518	ENSAMEG00000012997	VARS2	97	75.518	Ailuropoda_melanoleuca
ENSTTRG00000012243	VARS2	85	51.429	ENSACIG00000004344	vars2	82	51.429	Amphilophus_citrinellus
ENSTTRG00000012243	VARS2	77	57.669	ENSAOCG00000000476	vars2	80	49.767	Amphiprion_ocellaris
ENSTTRG00000012243	VARS2	77	57.669	ENSAPEG00000008646	vars2	78	49.767	Amphiprion_percula
ENSTTRG00000012243	VARS2	81	55.488	ENSATEG00000012291	vars2	82	52.308	Anabas_testudineus
ENSTTRG00000012243	VARS2	84	65.500	ENSACAG00000022093	VARS2	84	65.500	Anolis_carolinensis
ENSTTRG00000012243	VARS2	100	75.470	ENSANAG00000038018	VARS2	100	75.470	Aotus_nancymaae
ENSTTRG00000012243	VARS2	91	49.528	ENSACLG00000018673	vars2	91	49.528	Astatotilapia_calliptera
ENSTTRG00000012243	VARS2	82	53.552	ENSAMXG00000017773	vars2	80	57.426	Astyanax_mexicanus
ENSTTRG00000012243	VARS2	99	80.076	ENSBTAG00000010698	VARS2	93	95.516	Bos_taurus
ENSTTRG00000012243	VARS2	100	75.376	ENSCJAG00000019826	VARS2	100	75.376	Callithrix_jacchus
ENSTTRG00000012243	VARS2	93	82.511	ENSCAFG00000000454	VARS2	92	82.511	Canis_familiaris
ENSTTRG00000012243	VARS2	89	75.486	ENSCAFG00020019387	VARS2	95	75.565	Canis_lupus_dingo
ENSTTRG00000012243	VARS2	93	93.274	ENSCHIG00000007847	VARS2	93	93.274	Capra_hircus
ENSTTRG00000012243	VARS2	100	75.658	ENSTSYG00000009904	VARS2	100	75.658	Carlito_syrichta
ENSTTRG00000012243	VARS2	87	71.030	ENSCAPG00000017770	VARS2	99	71.030	Cavia_aperea
ENSTTRG00000012243	VARS2	99	71.966	ENSCPOG00000021834	VARS2	93	84.513	Cavia_porcellus
ENSTTRG00000012243	VARS2	100	75.940	ENSCCAG00000037907	VARS2	100	75.940	Cebus_capucinus
ENSTTRG00000012243	VARS2	100	76.692	ENSCATG00000032554	VARS2	91	89.238	Cercocebus_atys
ENSTTRG00000012243	VARS2	99	72.290	ENSCLAG00000002889	VARS2	99	72.290	Chinchilla_lanigera
ENSTTRG00000012243	VARS2	100	76.222	ENSCSAG00000008327	VARS2	94	88.341	Chlorocebus_sabaeus
ENSTTRG00000012243	VARS2	83	73.510	ENSCPBG00000021502	VARS2	89	73.510	Chrysemys_picta_bellii
ENSTTRG00000012243	VARS2	93	90.135	ENSCANG00000014991	VARS2	93	90.135	Colobus_angolensis_palliatus
ENSTTRG00000012243	VARS2	98	71.415	ENSCGRG00001021535	Vars2	99	71.483	Cricetulus_griseus_chok1gshd
ENSTTRG00000012243	VARS2	98	71.415	ENSCGRG00000014112	Vars2	99	71.483	Cricetulus_griseus_crigri
ENSTTRG00000012243	VARS2	69	63.030	ENSCSEG00000015432	vars2	78	68.000	Cynoglossus_semilaevis
ENSTTRG00000012243	VARS2	63	50.225	ENSCVAG00000017765	vars2	92	50.075	Cyprinodon_variegatus
ENSTTRG00000012243	VARS2	89	47.959	ENSDARG00000056717	vars2	91	47.959	Danio_rerio
ENSTTRG00000012243	VARS2	67	88.119	ENSDORG00000008516	Vars2	80	88.119	Dipodomys_ordii
ENSTTRG00000012243	VARS2	100	65.038	ENSETEG00000014844	VARS2	99	65.038	Echinops_telfairi
ENSTTRG00000012243	VARS2	88	92.574	ENSEASG00005019997	VARS2	90	92.574	Equus_asinus_asinus
ENSTTRG00000012243	VARS2	93	92.377	ENSECAG00000018202	VARS2	93	92.377	Equus_caballus
ENSTTRG00000012243	VARS2	56	80.556	ENSEEUG00000012591	-	57	80.556	Erinaceus_europaeus
ENSTTRG00000012243	VARS2	93	44.530	ENSELUG00000017824	vars2	97	44.079	Esox_lucius
ENSTTRG00000012243	VARS2	88	89.604	ENSFCAG00000010531	VARS2	88	89.604	Felis_catus
ENSTTRG00000012243	VARS2	93	86.996	ENSFDAG00000017216	VARS2	93	86.996	Fukomys_damarensis
ENSTTRG00000012243	VARS2	76	60.403	ENSFHEG00000013932	vars2	77	52.970	Fundulus_heteroclitus
ENSTTRG00000012243	VARS2	84	49.545	ENSGMOG00000018960	vars2	91	49.432	Gadus_morhua
ENSTTRG00000012243	VARS2	70	49.158	ENSGAFG00000004737	vars2	79	49.005	Gambusia_affinis
ENSTTRG00000012243	VARS2	78	59.459	ENSGACG00000001464	vars2	92	59.459	Gasterosteus_aculeatus
ENSTTRG00000012243	VARS2	78	74.436	ENSGAGG00000011652	VARS2	86	74.436	Gopherus_agassizii
ENSTTRG00000012243	VARS2	100	76.128	ENSGGOG00000014587	VARS2	94	89.238	Gorilla_gorilla
ENSTTRG00000012243	VARS2	91	45.024	ENSHBUG00000002448	vars2	91	45.024	Haplochromis_burtoni
ENSTTRG00000012243	VARS2	93	80.804	ENSHGLG00000012886	VARS2	90	80.804	Heterocephalus_glaber_female
ENSTTRG00000012243	VARS2	93	80.804	ENSHGLG00100016535	VARS2	94	80.804	Heterocephalus_glaber_male
ENSTTRG00000012243	VARS2	60	57.927	ENSHCOG00000017907	vars2	84	57.927	Hippocampus_comes
ENSTTRG00000012243	VARS2	82	52.980	ENSIPUG00000015573	Vars2	87	51.876	Ictalurus_punctatus
ENSTTRG00000012243	VARS2	100	75.940	ENSSTOG00000009924	VARS2	100	75.940	Ictidomys_tridecemlineatus
ENSTTRG00000012243	VARS2	99	72.280	ENSJJAG00000011144	Vars2	99	72.280	Jaculus_jaculus
ENSTTRG00000012243	VARS2	80	56.098	ENSKMAG00000001393	vars2	81	51.269	Kryptolebias_marmoratus
ENSTTRG00000012243	VARS2	77	57.426	ENSLBEG00000011949	vars2	75	57.426	Labrus_bergylta
ENSTTRG00000012243	VARS2	83	59.000	ENSLACG00000001576	-	87	59.000	Latimeria_chalumnae
ENSTTRG00000012243	VARS2	99	75.473	ENSLAFG00000015183	VARS2	93	90.135	Loxodonta_africana
ENSTTRG00000012243	VARS2	100	75.940	ENSMFAG00000042367	VARS2	94	88.789	Macaca_fascicularis
ENSTTRG00000012243	VARS2	100	76.034	ENSMMUG00000018609	VARS2	100	76.034	Macaca_mulatta
ENSTTRG00000012243	VARS2	93	89.238	ENSMNEG00000043163	VARS2	94	89.238	Macaca_nemestrina
ENSTTRG00000012243	VARS2	100	76.598	ENSMLEG00000041728	VARS2	91	88.789	Mandrillus_leucophaeus
ENSTTRG00000012243	VARS2	78	52.809	ENSMAMG00000020339	vars2	78	50.383	Mastacembelus_armatus
ENSTTRG00000012243	VARS2	91	49.528	ENSMZEG00005017669	vars2	91	49.528	Maylandia_zebra
ENSTTRG00000012243	VARS2	93	81.982	ENSMAUG00000018946	Vars2	92	81.982	Mesocricetus_auratus
ENSTTRG00000012243	VARS2	86	76.570	ENSMICG00000005365	VARS2	100	76.570	Microcebus_murinus
ENSTTRG00000012243	VARS2	93	82.883	ENSMOCG00000014607	Vars2	93	82.883	Microtus_ochrogaster
ENSTTRG00000012243	VARS2	79	61.486	ENSMMOG00000012122	vars2	78	54.455	Mola_mola
ENSTTRG00000012243	VARS2	99	64.151	ENSMODG00000015848	VARS2	99	64.151	Monodelphis_domestica
ENSTTRG00000012243	VARS2	77	67.442	ENSMALG00000009217	vars2	82	64.189	Monopterus_albus
ENSTTRG00000012243	VARS2	99	72.306	MGP_CAROLIEiJ_G0021529	Vars2	93	84.685	Mus_caroli
ENSTTRG00000012243	VARS2	99	72.023	ENSMUSG00000038838	Vars2	99	72.023	Mus_musculus
ENSTTRG00000012243	VARS2	93	84.685	MGP_PahariEiJ_G0020523	Vars2	93	84.685	Mus_pahari
ENSTTRG00000012243	VARS2	99	72.212	MGP_SPRETEiJ_G0022436	Vars2	99	72.212	Mus_spretus
ENSTTRG00000012243	VARS2	99	76.083	ENSMPUG00000011643	VARS2	100	76.083	Mustela_putorius_furo
ENSTTRG00000012243	VARS2	88	88.789	ENSMLUG00000002356	VARS2	86	88.789	Myotis_lucifugus
ENSTTRG00000012243	VARS2	92	76.172	ENSNGAG00000020607	Vars2	96	76.172	Nannospalax_galili
ENSTTRG00000012243	VARS2	100	73.308	ENSNLEG00000005625	VARS2	91	89.686	Nomascus_leucogenys
ENSTTRG00000012243	VARS2	70	85.326	ENSMEUG00000014475	VARS2	82	85.326	Notamacropus_eugenii
ENSTTRG00000012243	VARS2	84	88.050	ENSOPRG00000000682	VARS2	85	87.805	Ochotona_princeps
ENSTTRG00000012243	VARS2	93	80.357	ENSODEG00000017965	VARS2	93	80.357	Octodon_degus
ENSTTRG00000012243	VARS2	56	61.486	ENSONIG00000004734	vars2	61	61.486	Oreochromis_niloticus
ENSTTRG00000012243	VARS2	74	96.970	ENSOANG00000000398	-	97	96.970	Ornithorhynchus_anatinus
ENSTTRG00000012243	VARS2	93	80.717	ENSOCUG00000021496	VARS2	59	80.717	Oryctolagus_cuniculus
ENSTTRG00000012243	VARS2	79	60.667	ENSORLG00000010632	vars2	81	51.500	Oryzias_latipes
ENSTTRG00000012243	VARS2	79	60.667	ENSORLG00020018584	vars2	81	51.500	Oryzias_latipes_hni
ENSTTRG00000012243	VARS2	79	61.333	ENSORLG00015010408	vars2	80	52.381	Oryzias_latipes_hsok
ENSTTRG00000012243	VARS2	80	58.385	ENSOMEG00000008360	vars2	82	49.770	Oryzias_melastigma
ENSTTRG00000012243	VARS2	93	89.238	ENSOGAG00000006087	VARS2	91	89.238	Otolemur_garnettii
ENSTTRG00000012243	VARS2	92	94.170	ENSOARG00000010844	VARS2	91	94.170	Ovis_aries
ENSTTRG00000012243	VARS2	100	76.316	ENSPPAG00000041141	VARS2	91	89.686	Pan_paniscus
ENSTTRG00000012243	VARS2	94	84.375	ENSPPRG00000006751	VARS2	93	84.375	Panthera_pardus
ENSTTRG00000012243	VARS2	94	84.375	ENSPTIG00000017799	VARS2	93	84.375	Panthera_tigris_altaica
ENSTTRG00000012243	VARS2	100	76.316	ENSPTRG00000034497	VARS2	91	89.686	Pan_troglodytes
ENSTTRG00000012243	VARS2	100	76.598	ENSPANG00000018481	VARS2	94	89.238	Papio_anubis
ENSTTRG00000012243	VARS2	88	59.887	ENSPKIG00000011372	vars2	93	54.795	Paramormyrops_kingsleyae
ENSTTRG00000012243	VARS2	54	75.000	ENSPSIG00000006206	VARS2	83	75.000	Pelodiscus_sinensis
ENSTTRG00000012243	VARS2	72	66.667	ENSPMGG00000000465	vars2	72	66.667	Periophthalmus_magnuspinnatus
ENSTTRG00000012243	VARS2	99	72.676	ENSPEMG00000014691	Vars2	96	76.147	Peromyscus_maniculatus_bairdii
ENSTTRG00000012243	VARS2	95	72.179	ENSPCIG00000015040	VARS2	95	72.179	Phascolarctos_cinereus
ENSTTRG00000012243	VARS2	80	62.162	ENSPFOG00000017616	vars2	82	52.604	Poecilia_formosa
ENSTTRG00000012243	VARS2	80	62.162	ENSPLAG00000019778	vars2	81	55.233	Poecilia_latipinna
ENSTTRG00000012243	VARS2	80	62.162	ENSPMEG00000011123	vars2	80	55.233	Poecilia_mexicana
ENSTTRG00000012243	VARS2	78	58.268	ENSPREG00000014998	vars2	83	53.020	Poecilia_reticulata
ENSTTRG00000012243	VARS2	100	76.410	ENSPPYG00000016424	VARS2	94	89.686	Pongo_abelii
ENSTTRG00000012243	VARS2	76	81.600	ENSPCAG00000006946	VARS2	77	81.600	Procavia_capensis
ENSTTRG00000012243	VARS2	99	75.117	ENSPCOG00000014839	VARS2	97	75.117	Propithecus_coquereli
ENSTTRG00000012243	VARS2	93	88.341	ENSPVAG00000004197	VARS2	94	88.341	Pteropus_vampyrus
ENSTTRG00000012243	VARS2	75	61.719	ENSPNYG00000010314	vars2	90	61.719	Pundamilia_nyererei
ENSTTRG00000012243	VARS2	82	54.945	ENSPNAG00000026793	vars2	80	54.945	Pygocentrus_nattereri
ENSTTRG00000012243	VARS2	99	71.807	ENSRNOG00000000833	Vars2	93	84.305	Rattus_norvegicus
ENSTTRG00000012243	VARS2	93	88.789	ENSRBIG00000032725	VARS2	94	88.789	Rhinopithecus_bieti
ENSTTRG00000012243	VARS2	93	89.686	ENSRROG00000043847	VARS2	94	89.686	Rhinopithecus_roxellana
ENSTTRG00000012243	VARS2	100	73.297	ENSSBOG00000033240	VARS2	92	89.686	Saimiri_boliviensis_boliviensis
ENSTTRG00000012243	VARS2	87	76.733	ENSSHAG00000009307	VARS2	89	76.733	Sarcophilus_harrisii
ENSTTRG00000012243	VARS2	84	57.068	ENSSFOG00015016187	vars2	86	53.810	Scleropages_formosus
ENSTTRG00000012243	VARS2	76	62.745	ENSSMAG00000020842	vars2	79	52.657	Scophthalmus_maximus
ENSTTRG00000012243	VARS2	86	57.317	ENSSDUG00000011598	vars2	90	53.807	Seriola_dumerili
ENSTTRG00000012243	VARS2	74	65.116	ENSSLDG00000015492	vars2	78	51.482	Seriola_lalandi_dorsalis
ENSTTRG00000012243	VARS2	83	59.081	ENSSPUG00000014700	VARS2	81	71.014	Sphenodon_punctatus
ENSTTRG00000012243	VARS2	74	62.016	ENSSPAG00000004654	vars2	74	54.897	Stegastes_partitus
ENSTTRG00000012243	VARS2	99	79.002	ENSSSCG00000001384	VARS2	100	79.002	Sus_scrofa
ENSTTRG00000012243	VARS2	79	59.748	ENSTRUG00000005264	vars2	84	50.971	Takifugu_rubripes
ENSTTRG00000012243	VARS2	86	50.297	ENSTNIG00000005916	vars2	83	50.148	Tetraodon_nigroviridis
ENSTTRG00000012243	VARS2	99	74.788	ENSUAMG00000026124	VARS2	100	74.788	Ursus_americanus
ENSTTRG00000012243	VARS2	99	75.706	ENSUMAG00000019894	VARS2	100	75.706	Ursus_maritimus
ENSTTRG00000012243	VARS2	99	74.953	ENSVVUG00000010754	VARS2	88	82.960	Vulpes_vulpes
ENSTTRG00000012243	VARS2	77	72.973	ENSXETG00000003036	vars2	86	72.973	Xenopus_tropicalis
ENSTTRG00000012243	VARS2	75	62.162	ENSXCOG00000003455	vars2	79	53.927	Xiphophorus_couchianus
ENSTTRG00000012243	VARS2	81	59.006	ENSXMAG00000013523	vars2	82	53.927	Xiphophorus_maculatus