EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000012275 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 3403 bases
Position: chrGeneScaffold_3624:52349-55751
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000011643	RRM_1	PF00076.22	6.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000012274	ALYREF-201	768	-	ENSTTRP00000011643	255 (aa)	-	UPI00018B5ACB

Gene Model

Click here to download ENSTTRG00000012275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000012275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000012275	ALYREF	100	96.109	ENSG00000183684	ALYREF	97	96.109	Homo_sapiens
ENSTTRG00000012275	ALYREF	100	66.906	ENSAPOG00000018455	ALYREF	100	70.863	Acanthochromis_polyacanthus
ENSTTRG00000012275	ALYREF	80	86.190	ENSAMEG00000017463	ALYREF	74	91.304	Ailuropoda_melanoleuca
ENSTTRG00000012275	ALYREF	100	75.191	ENSACAG00000010526	ALYREF	100	73.282	Anolis_carolinensis
ENSTTRG00000012275	ALYREF	100	79.377	ENSANAG00000028229	-	78	81.712	Aotus_nancymaae
ENSTTRG00000012275	ALYREF	69	93.220	ENSANAG00000022638	-	75	93.220	Aotus_nancymaae
ENSTTRG00000012275	ALYREF	100	98.054	ENSBTAG00000008498	ALYREF	100	98.054	Bos_taurus
ENSTTRG00000012275	ALYREF	100	95.331	ENSCJAG00000039942	ALYREF	97	95.331	Callithrix_jacchus
ENSTTRG00000012275	ALYREF	100	97.276	ENSCAFG00000005877	ALYREF	100	97.276	Canis_familiaris
ENSTTRG00000012275	ALYREF	100	97.276	ENSCAFG00020009815	ALYREF	100	97.276	Canis_lupus_dingo
ENSTTRG00000012275	ALYREF	100	97.287	ENSCHIG00000017396	ALYREF	97	97.287	Capra_hircus
ENSTTRG00000012275	ALYREF	87	81.223	ENSTSYG00000002272	ALYREF	68	95.954	Carlito_syrichta
ENSTTRG00000012275	ALYREF	53	97.015	ENSCAPG00000014727	-	100	97.015	Cavia_aperea
ENSTTRG00000012275	ALYREF	100	96.109	ENSCPOG00000013710	ALYREF	100	96.109	Cavia_porcellus
ENSTTRG00000012275	ALYREF	100	95.720	ENSCCAG00000020578	-	97	95.720	Cebus_capucinus
ENSTTRG00000012275	ALYREF	100	73.541	ENSCCAG00000030237	-	100	70.817	Cebus_capucinus
ENSTTRG00000012275	ALYREF	100	96.109	ENSCATG00000033169	ALYREF	97	96.109	Cercocebus_atys
ENSTTRG00000012275	ALYREF	100	88.327	ENSCLAG00000015026	ALYREF	100	88.327	Chinchilla_lanigera
ENSTTRG00000012275	ALYREF	100	96.109	ENSCSAG00000002216	ALYREF	97	96.109	Chlorocebus_sabaeus
ENSTTRG00000012275	ALYREF	70	92.265	ENSCANG00000034056	ALYREF	89	85.876	Colobus_angolensis_palliatus
ENSTTRG00000012275	ALYREF	100	93.774	ENSCGRG00001018191	-	100	91.440	Cricetulus_griseus_chok1gshd
ENSTTRG00000012275	ALYREF	74	90.576	ENSCGRG00000015871	-	89	85.326	Cricetulus_griseus_crigri
ENSTTRG00000012275	ALYREF	72	53.608	ENSCSEG00000015438	-	98	53.202	Cynoglossus_semilaevis
ENSTTRG00000012275	ALYREF	69	94.886	ENSDNOG00000002563	ALYREF	74	94.886	Dasypus_novemcinctus
ENSTTRG00000012275	ALYREF	87	82.222	ENSDORG00000025849	-	73	95.556	Dipodomys_ordii
ENSTTRG00000012275	ALYREF	69	94.886	ENSETEG00000016596	ALYREF	99	93.750	Echinops_telfairi
ENSTTRG00000012275	ALYREF	100	97.665	ENSEASG00005005824	ALYREF	95	97.665	Equus_asinus_asinus
ENSTTRG00000012275	ALYREF	100	97.665	ENSECAG00000018754	ALYREF	95	97.665	Equus_caballus
ENSTTRG00000012275	ALYREF	67	93.605	ENSEEUG00000010164	ALYREF	100	93.605	Erinaceus_europaeus
ENSTTRG00000012275	ALYREF	100	97.665	ENSFCAG00000022549	ALYREF	98	97.665	Felis_catus
ENSTTRG00000012275	ALYREF	80	86.765	ENSFDAG00000001213	ALYREF	93	86.341	Fukomys_damarensis
ENSTTRG00000012275	ALYREF	100	82.625	ENSGALG00000007237	ALYREF	100	82.239	Gallus_gallus
ENSTTRG00000012275	ALYREF	100	69.057	ENSGACG00000013328	ALYREF	100	69.925	Gasterosteus_aculeatus
ENSTTRG00000012275	ALYREF	100	82.061	ENSGAGG00000008536	ALYREF	100	80.916	Gopherus_agassizii
ENSTTRG00000012275	ALYREF	100	96.498	ENSGGOG00000013935	ALYREF	99	95.736	Gorilla_gorilla
ENSTTRG00000012275	ALYREF	100	95.720	ENSHGLG00000008293	ALYREF	100	95.720	Heterocephalus_glaber_female
ENSTTRG00000012275	ALYREF	80	81.938	ENSHGLG00100006949	ALYREF	77	95.028	Heterocephalus_glaber_male
ENSTTRG00000012275	ALYREF	100	67.790	ENSHCOG00000015046	ALYREF	100	69.118	Hippocampus_comes
ENSTTRG00000012275	ALYREF	100	93.385	ENSJJAG00000004134	-	100	93.385	Jaculus_jaculus
ENSTTRG00000012275	ALYREF	100	69.697	ENSLACG00000005694	ALYREF	100	70.455	Latimeria_chalumnae
ENSTTRG00000012275	ALYREF	73	96.277	ENSLAFG00000003083	ALYREF	100	96.277	Loxodonta_africana
ENSTTRG00000012275	ALYREF	100	92.996	ENSMFAG00000001394	ALYREF	97	93.385	Macaca_fascicularis
ENSTTRG00000012275	ALYREF	100	96.109	ENSMMUG00000012884	ALYREF	97	96.109	Macaca_mulatta
ENSTTRG00000012275	ALYREF	100	96.109	ENSMNEG00000043666	ALYREF	97	96.109	Macaca_nemestrina
ENSTTRG00000012275	ALYREF	72	84.211	ENSMLEG00000043353	ALYREF	82	86.034	Mandrillus_leucophaeus
ENSTTRG00000012275	ALYREF	100	78.906	ENSMAUG00000020552	-	100	76.953	Mesocricetus_auratus
ENSTTRG00000012275	ALYREF	100	96.109	ENSMICG00000017403	ALYREF	97	96.109	Microcebus_murinus
ENSTTRG00000012275	ALYREF	100	82.443	ENSMOCG00000016792	-	100	81.439	Microtus_ochrogaster
ENSTTRG00000012275	ALYREF	99	92.996	ENSMODG00000003030	ALYREF	84	92.996	Monodelphis_domestica
ENSTTRG00000012275	ALYREF	100	68.478	ENSMALG00000019408	ALYREF	100	66.182	Monopterus_albus
ENSTTRG00000012275	ALYREF	100	96.109	MGP_CAROLIEiJ_G0017529	Alyref	100	96.109	Mus_caroli
ENSTTRG00000012275	ALYREF	100	73.541	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.039	Mus_caroli
ENSTTRG00000012275	ALYREF	100	61.278	ENSMUSG00000086727	4931428L18Rik	100	57.576	Mus_musculus
ENSTTRG00000012275	ALYREF	100	60.902	ENSMUSG00000117091	AC153137.1	100	56.818	Mus_musculus
ENSTTRG00000012275	ALYREF	100	96.109	ENSMUSG00000025134	Alyref	100	96.109	Mus_musculus
ENSTTRG00000012275	ALYREF	91	63.830	ENSMUSG00000096640	Gm4312	62	61.576	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000094144	Gm21312	100	52.817	Mus_musculus
ENSTTRG00000012275	ALYREF	100	60.554	ENSMUSG00000090854	Gm4340	100	51.389	Mus_musculus
ENSTTRG00000012275	ALYREF	91	65.106	ENSMUSG00000091101	Gm4302	61	62.562	Mus_musculus
ENSTTRG00000012275	ALYREF	91	64.957	ENSMUSG00000096744	Gm4307	62	62.562	Mus_musculus
ENSTTRG00000012275	ALYREF	100	70.817	ENSMUSG00000060244	Alyref2	100	69.261	Mus_musculus
ENSTTRG00000012275	ALYREF	91	64.957	ENSMUSG00000112856	Gm4305	62	62.562	Mus_musculus
ENSTTRG00000012275	ALYREF	91	64.957	ENSMUSG00000112931	Gm4303	62	62.562	Mus_musculus
ENSTTRG00000012275	ALYREF	91	63.830	ENSMUSG00000094314	Gm4301	62	61.576	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000097878	Gm8764	98	58.434	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000091779	Gm21293	100	52.817	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000097550	Gm21304	100	52.817	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000095022	Gm20765	100	52.817	Mus_musculus
ENSTTRG00000012275	ALYREF	100	61.404	ENSMUSG00000097427	Gm6763	98	58.434	Mus_musculus
ENSTTRG00000012275	ALYREF	100	96.109	MGP_PahariEiJ_G0018655	-	100	96.109	Mus_pahari
ENSTTRG00000012275	ALYREF	73	95.767	MGP_PahariEiJ_G0018656	-	99	95.767	Mus_pahari
ENSTTRG00000012275	ALYREF	82	67.299	MGP_PahariEiJ_G0027254	-	82	64.039	Mus_pahari
ENSTTRG00000012275	ALYREF	82	67.299	MGP_PahariEiJ_G0027255	-	80	64.039	Mus_pahari
ENSTTRG00000012275	ALYREF	100	70.428	MGP_SPRETEiJ_G0015679	Alyref2	100	68.872	Mus_spretus
ENSTTRG00000012275	ALYREF	100	96.109	MGP_SPRETEiJ_G0018373	Alyref	100	96.109	Mus_spretus
ENSTTRG00000012275	ALYREF	69	56.444	MGP_SPRETEiJ_G0016590	-	54	74.590	Mus_spretus
ENSTTRG00000012275	ALYREF	98	69.721	ENSMLUG00000027516	-	78	66.135	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	57.143	ENSMLUG00000024471	-	82	54.440	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	60.317	ENSMLUG00000024447	-	76	59.524	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	61.660	ENSMLUG00000024976	-	79	58.498	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	62.791	ENSMLUG00000002626	-	98	63.566	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	100	52.256	ENSMLUG00000023213	-	70	54.645	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	62.745	ENSMLUG00000025677	-	77	60.784	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	57.031	ENSMLUG00000022869	-	81	55.859	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	60.784	ENSMLUG00000030407	-	77	59.216	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	54.864	ENSMLUG00000015043	-	98	53.696	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	84	58.716	ENSMLUG00000028343	-	82	65.896	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	62.550	ENSMLUG00000026271	-	79	60.956	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	82	82.710	ENSMLUG00000009555	-	69	89.189	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	98	61.905	ENSMLUG00000027352	-	77	60.714	Myotis_lucifugus
ENSTTRG00000012275	ALYREF	100	96.498	ENSNLEG00000010313	ALYREF	97	96.498	Nomascus_leucogenys
ENSTTRG00000012275	ALYREF	82	74.762	ENSMEUG00000002210	ALYREF	92	74.762	Notamacropus_eugenii
ENSTTRG00000012275	ALYREF	53	92.537	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSTTRG00000012275	ALYREF	100	96.154	ENSODEG00000008359	ALYREF	100	96.154	Octodon_degus
ENSTTRG00000012275	ALYREF	100	67.636	ENSORLG00000012331	ALYREF	100	68.000	Oryzias_latipes
ENSTTRG00000012275	ALYREF	76	88.384	ENSOGAG00000012409	ALYREF	79	89.305	Otolemur_garnettii
ENSTTRG00000012275	ALYREF	69	97.727	ENSOARG00000017932	ALYREF	66	97.727	Ovis_aries
ENSTTRG00000012275	ALYREF	100	97.665	ENSPPRG00000010829	ALYREF	98	97.665	Panthera_pardus
ENSTTRG00000012275	ALYREF	56	96.503	ENSPTIG00000006399	ALYREF	80	96.503	Panthera_tigris_altaica
ENSTTRG00000012275	ALYREF	100	96.498	ENSPTRG00000009774	ALYREF	97	96.498	Pan_troglodytes
ENSTTRG00000012275	ALYREF	100	96.109	ENSPANG00000019265	ALYREF	97	96.109	Papio_anubis
ENSTTRG00000012275	ALYREF	52	91.729	ENSPSIG00000017541	ALYREF	98	92.481	Pelodiscus_sinensis
ENSTTRG00000012275	ALYREF	100	96.109	ENSPPYG00000008749	ALYREF	97	96.109	Pongo_abelii
ENSTTRG00000012275	ALYREF	100	96.109	ENSPCOG00000020874	ALYREF	97	96.109	Propithecus_coquereli
ENSTTRG00000012275	ALYREF	100	74.708	ENSPVAG00000017866	ALYREF	69	93.182	Pteropus_vampyrus
ENSTTRG00000012275	ALYREF	67	95.930	ENSRNOG00000036687	Alyref	91	95.930	Rattus_norvegicus
ENSTTRG00000012275	ALYREF	70	92.265	ENSRBIG00000039651	ALYREF	74	92.265	Rhinopithecus_bieti
ENSTTRG00000012275	ALYREF	90	88.362	ENSRROG00000045364	ALYREF	91	88.362	Rhinopithecus_roxellana
ENSTTRG00000012275	ALYREF	75	91.710	ENSSHAG00000010459	ALYREF	95	93.478	Sarcophilus_harrisii
ENSTTRG00000012275	ALYREF	100	51.439	ENSSDUG00000003992	-	100	52.669	Seriola_dumerili
ENSTTRG00000012275	ALYREF	100	52.364	ENSSLDG00000005386	-	100	53.237	Seriola_lalandi_dorsalis
ENSTTRG00000012275	ALYREF	100	81.679	ENSSPUG00000004600	ALYREF	100	79.771	Sphenodon_punctatus
ENSTTRG00000012275	ALYREF	100	67.384	ENSSPAG00000011178	ALYREF	97	68.459	Stegastes_partitus
ENSTTRG00000012275	ALYREF	100	97.276	ENSSSCG00000032655	ALYREF	100	97.276	Sus_scrofa
ENSTTRG00000012275	ALYREF	52	92.424	ENSTGUG00000003513	ALYREF	100	90.370	Taeniopygia_guttata
ENSTTRG00000012275	ALYREF	100	68.015	ENSTRUG00000008828	ALYREF	100	63.370	Takifugu_rubripes
ENSTTRG00000012275	ALYREF	69	96.023	ENSTBEG00000005834	ALYREF	99	96.023	Tupaia_belangeri
ENSTTRG00000012275	ALYREF	69	83.051	ENSUAMG00000016931	ALYREF	66	80.791	Ursus_americanus
ENSTTRG00000012275	ALYREF	69	83.051	ENSUMAG00000016384	ALYREF	65	80.791	Ursus_maritimus
ENSTTRG00000012275	ALYREF	100	73.684	ENSXETG00000005391	alyref	100	70.189	Xenopus_tropicalis