EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000012660 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrGeneScaffold_2813:75604-78339
Accession: 101324853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000012005	RNA_ligase	PF09414.10	5.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000012652	-	2736	-	ENSTTRP00000012005	911 (aa)	XP_004324577	A0A2U4A6L7

Gene Model

Click here to download ENSTTRG00000012660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000012660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000012660	LIG4	100	89.572	ENSG00000174405	LIG4	100	89.572	Homo_sapiens
ENSTTRG00000012660	LIG4	99	64.835	ENSAPOG00000000866	lig4	99	65.055	Acanthochromis_polyacanthus
ENSTTRG00000012660	LIG4	100	89.133	ENSAMEG00000019685	LIG4	99	89.133	Ailuropoda_melanoleuca
ENSTTRG00000012660	LIG4	99	65.127	ENSACIG00000018309	lig4	99	65.347	Amphilophus_citrinellus
ENSTTRG00000012660	LIG4	99	64.945	ENSAOCG00000011768	lig4	99	65.165	Amphiprion_ocellaris
ENSTTRG00000012660	LIG4	99	65.055	ENSAPEG00000017815	lig4	99	65.275	Amphiprion_percula
ENSTTRG00000012660	LIG4	99	65.011	ENSATEG00000005583	lig4	99	65.121	Anabas_testudineus
ENSTTRG00000012660	LIG4	97	73.977	ENSAPLG00000001673	LIG4	99	73.977	Anas_platyrhynchos
ENSTTRG00000012660	LIG4	99	74.197	ENSACAG00000014566	LIG4	99	74.197	Anolis_carolinensis
ENSTTRG00000012660	LIG4	100	88.584	ENSANAG00000012446	LIG4	100	88.584	Aotus_nancymaae
ENSTTRG00000012660	LIG4	99	65.017	ENSACLG00000027051	lig4	99	65.017	Astatotilapia_calliptera
ENSTTRG00000012660	LIG4	99	64.153	ENSAMXG00000008192	lig4	94	64.153	Astyanax_mexicanus
ENSTTRG00000012660	LIG4	100	91.218	ENSBTAG00000015868	LIG4	100	91.218	Bos_taurus
ENSTTRG00000012660	LIG4	100	87.816	ENSCJAG00000014689	LIG4	100	87.816	Callithrix_jacchus
ENSTTRG00000012660	LIG4	100	89.682	ENSCAFG00000006031	LIG4	100	89.682	Canis_familiaris
ENSTTRG00000012660	LIG4	100	89.682	ENSCAFG00020021230	LIG4	100	89.682	Canis_lupus_dingo
ENSTTRG00000012660	LIG4	100	90.670	ENSCHIG00000001019	LIG4	100	90.670	Capra_hircus
ENSTTRG00000012660	LIG4	99	87.708	ENSCAPG00000006284	LIG4	99	87.708	Cavia_aperea
ENSTTRG00000012660	LIG4	100	87.706	ENSCPOG00000014266	LIG4	100	87.706	Cavia_porcellus
ENSTTRG00000012660	LIG4	100	88.584	ENSCCAG00000019971	LIG4	100	88.584	Cebus_capucinus
ENSTTRG00000012660	LIG4	100	89.023	ENSCATG00000021075	LIG4	100	89.023	Cercocebus_atys
ENSTTRG00000012660	LIG4	100	87.816	ENSCLAG00000003376	LIG4	100	87.816	Chinchilla_lanigera
ENSTTRG00000012660	LIG4	100	89.243	ENSCSAG00000000211	LIG4	100	89.243	Chlorocebus_sabaeus
ENSTTRG00000012660	LIG4	99	77.815	ENSCPBG00000023291	LIG4	100	77.233	Chrysemys_picta_bellii
ENSTTRG00000012660	LIG4	68	45.628	ENSCING00000009536	-	95	45.628	Ciona_intestinalis
ENSTTRG00000012660	LIG4	83	45.801	ENSCSAVG00000010336	-	98	45.801	Ciona_savignyi
ENSTTRG00000012660	LIG4	100	89.133	ENSCANG00000005805	LIG4	100	89.133	Colobus_angolensis_palliatus
ENSTTRG00000012660	LIG4	100	86.184	ENSCGRG00001012072	Lig4	100	86.184	Cricetulus_griseus_chok1gshd
ENSTTRG00000012660	LIG4	100	86.184	ENSCGRG00000013417	Lig4	100	86.184	Cricetulus_griseus_crigri
ENSTTRG00000012660	LIG4	97	65.568	ENSCSEG00000013905	lig4	95	65.568	Cynoglossus_semilaevis
ENSTTRG00000012660	LIG4	99	64.563	ENSCVAG00000007896	lig4	99	64.563	Cyprinodon_variegatus
ENSTTRG00000012660	LIG4	99	63.525	ENSDARG00000060620	lig4	98	63.525	Danio_rerio
ENSTTRG00000012660	LIG4	100	87.610	ENSDNOG00000000513	LIG4	100	87.610	Dasypus_novemcinctus
ENSTTRG00000012660	LIG4	100	86.169	ENSDORG00000027303	Lig4	100	86.169	Dipodomys_ordii
ENSTTRG00000012660	LIG4	89	30.994	FBgn0030506	Lig4	91	30.994	Drosophila_melanogaster
ENSTTRG00000012660	LIG4	99	83.370	ENSETEG00000015563	LIG4	100	83.703	Echinops_telfairi
ENSTTRG00000012660	LIG4	99	43.266	ENSEBUG00000014243	lig4	99	43.127	Eptatretus_burgeri
ENSTTRG00000012660	LIG4	100	89.901	ENSEASG00005022073	LIG4	100	89.901	Equus_asinus_asinus
ENSTTRG00000012660	LIG4	100	89.352	ENSECAG00000003257	LIG4	100	89.352	Equus_caballus
ENSTTRG00000012660	LIG4	99	65.380	ENSELUG00000006787	lig4	99	65.491	Esox_lucius
ENSTTRG00000012660	LIG4	100	89.243	ENSFCAG00000031985	LIG4	100	89.243	Felis_catus
ENSTTRG00000012660	LIG4	89	74.293	ENSFALG00000004214	LIG4	98	74.293	Ficedula_albicollis
ENSTTRG00000012660	LIG4	100	88.474	ENSFDAG00000008973	LIG4	100	88.474	Fukomys_damarensis
ENSTTRG00000012660	LIG4	99	64.009	ENSFHEG00000007398	lig4	89	64.199	Fundulus_heteroclitus
ENSTTRG00000012660	LIG4	85	63.671	ENSGMOG00000012843	lig4	99	63.671	Gadus_morhua
ENSTTRG00000012660	LIG4	100	73.253	ENSGALG00000016854	LIG4	100	73.253	Gallus_gallus
ENSTTRG00000012660	LIG4	99	64.143	ENSGAFG00000019779	lig4	95	64.066	Gambusia_affinis
ENSTTRG00000012660	LIG4	99	62.680	ENSGACG00000014135	lig4	99	62.680	Gasterosteus_aculeatus
ENSTTRG00000012660	LIG4	100	89.462	ENSGGOG00000027771	LIG4	100	89.462	Gorilla_gorilla
ENSTTRG00000012660	LIG4	99	64.796	ENSHBUG00000006245	lig4	99	64.796	Haplochromis_burtoni
ENSTTRG00000012660	LIG4	100	88.584	ENSHGLG00000000718	LIG4	100	88.584	Heterocephalus_glaber_female
ENSTTRG00000012660	LIG4	100	88.584	ENSHGLG00100003265	LIG4	100	88.584	Heterocephalus_glaber_male
ENSTTRG00000012660	LIG4	99	63.516	ENSHCOG00000012010	lig4	99	63.516	Hippocampus_comes
ENSTTRG00000012660	LIG4	99	64.984	ENSIPUG00000013748	lig4	99	64.984	Ictalurus_punctatus
ENSTTRG00000012660	LIG4	100	87.816	ENSSTOG00000024303	LIG4	100	87.816	Ictidomys_tridecemlineatus
ENSTTRG00000012660	LIG4	100	86.828	ENSJJAG00000006750	Lig4	100	86.828	Jaculus_jaculus
ENSTTRG00000012660	LIG4	99	64.563	ENSKMAG00000001149	lig4	99	64.563	Kryptolebias_marmoratus
ENSTTRG00000012660	LIG4	91	65.060	ENSLBEG00000014578	lig4	99	65.301	Labrus_bergylta
ENSTTRG00000012660	LIG4	99	72.456	ENSLACG00000003282	LIG4	99	72.456	Latimeria_chalumnae
ENSTTRG00000012660	LIG4	99	69.265	ENSLOCG00000008901	lig4	98	69.265	Lepisosteus_oculatus
ENSTTRG00000012660	LIG4	100	85.871	ENSLAFG00000031152	LIG4	100	85.871	Loxodonta_africana
ENSTTRG00000012660	LIG4	100	89.243	ENSMFAG00000037235	LIG4	100	89.243	Macaca_fascicularis
ENSTTRG00000012660	LIG4	100	89.243	ENSMMUG00000008874	LIG4	100	89.243	Macaca_mulatta
ENSTTRG00000012660	LIG4	100	89.243	ENSMNEG00000023575	LIG4	100	89.243	Macaca_nemestrina
ENSTTRG00000012660	LIG4	100	88.913	ENSMLEG00000026720	LIG4	100	88.913	Mandrillus_leucophaeus
ENSTTRG00000012660	LIG4	99	64.505	ENSMAMG00000008472	lig4	99	64.725	Mastacembelus_armatus
ENSTTRG00000012660	LIG4	99	65.017	ENSMZEG00005001855	lig4	99	65.017	Maylandia_zebra
ENSTTRG00000012660	LIG4	100	73.908	ENSMGAG00000015532	LIG4	100	73.908	Meleagris_gallopavo
ENSTTRG00000012660	LIG4	100	83.644	ENSMOCG00000019000	Lig4	100	83.644	Microtus_ochrogaster
ENSTTRG00000012660	LIG4	99	63.898	ENSMMOG00000004390	lig4	99	63.898	Mola_mola
ENSTTRG00000012660	LIG4	100	82.108	ENSMODG00000025064	LIG4	100	82.566	Monodelphis_domestica
ENSTTRG00000012660	LIG4	99	64.452	ENSMALG00000008555	lig4	99	64.452	Monopterus_albus
ENSTTRG00000012660	LIG4	100	86.279	MGP_CAROLIEiJ_G0030809	Lig4	100	86.279	Mus_caroli
ENSTTRG00000012660	LIG4	100	85.950	ENSMUSG00000049717	Lig4	100	85.950	Mus_musculus
ENSTTRG00000012660	LIG4	100	85.840	MGP_PahariEiJ_G0021270	Lig4	100	85.840	Mus_pahari
ENSTTRG00000012660	LIG4	100	85.840	MGP_SPRETEiJ_G0031917	Lig4	100	85.840	Mus_spretus
ENSTTRG00000012660	LIG4	100	88.913	ENSMPUG00000018675	LIG4	100	88.913	Mustela_putorius_furo
ENSTTRG00000012660	LIG4	100	89.572	ENSMLUG00000001267	LIG4	100	89.572	Myotis_lucifugus
ENSTTRG00000012660	LIG4	100	85.840	ENSNGAG00000013258	Lig4	100	85.840	Nannospalax_galili
ENSTTRG00000012660	LIG4	99	65.017	ENSNBRG00000021252	lig4	99	65.017	Neolamprologus_brichardi
ENSTTRG00000012660	LIG4	100	89.572	ENSNLEG00000007888	LIG4	100	89.572	Nomascus_leucogenys
ENSTTRG00000012660	LIG4	100	86.389	ENSOPRG00000005765	LIG4	100	86.389	Ochotona_princeps
ENSTTRG00000012660	LIG4	100	86.498	ENSODEG00000019683	LIG4	100	86.498	Octodon_degus
ENSTTRG00000012660	LIG4	99	64.906	ENSONIG00000011969	lig4	98	65.127	Oreochromis_niloticus
ENSTTRG00000012660	LIG4	100	89.023	ENSOCUG00000015734	LIG4	100	89.023	Oryctolagus_cuniculus
ENSTTRG00000012660	LIG4	99	63.407	ENSORLG00000004041	lig4	99	63.407	Oryzias_latipes
ENSTTRG00000012660	LIG4	99	63.956	ENSORLG00020019607	lig4	99	63.956	Oryzias_latipes_hni
ENSTTRG00000012660	LIG4	99	63.626	ENSORLG00015017754	lig4	99	63.626	Oryzias_latipes_hsok
ENSTTRG00000012660	LIG4	74	68.787	ENSOMEG00000003459	lig4	98	68.787	Oryzias_melastigma
ENSTTRG00000012660	LIG4	100	88.048	ENSOGAG00000032120	LIG4	99	88.048	Otolemur_garnettii
ENSTTRG00000012660	LIG4	82	92.081	ENSOARG00000005590	LIG4	98	92.081	Ovis_aries
ENSTTRG00000012660	LIG4	100	89.133	ENSPPAG00000032998	LIG4	100	89.133	Pan_paniscus
ENSTTRG00000012660	LIG4	100	89.791	ENSPPRG00000017804	LIG4	100	89.791	Panthera_pardus
ENSTTRG00000012660	LIG4	100	89.791	ENSPTIG00000010051	LIG4	100	89.791	Panthera_tigris_altaica
ENSTTRG00000012660	LIG4	100	89.243	ENSPTRG00000006025	LIG4	100	89.243	Pan_troglodytes
ENSTTRG00000012660	LIG4	100	89.133	ENSPANG00000007562	LIG4	100	89.133	Papio_anubis
ENSTTRG00000012660	LIG4	99	65.752	ENSPKIG00000011645	lig4	98	65.752	Paramormyrops_kingsleyae
ENSTTRG00000012660	LIG4	99	76.813	ENSPSIG00000001504	LIG4	99	76.813	Pelodiscus_sinensis
ENSTTRG00000012660	LIG4	99	62.000	ENSPMGG00000013486	lig4	99	61.581	Periophthalmus_magnuspinnatus
ENSTTRG00000012660	LIG4	100	86.294	ENSPEMG00000000076	Lig4	100	86.294	Peromyscus_maniculatus_bairdii
ENSTTRG00000012660	LIG4	100	82.018	ENSPCIG00000021882	LIG4	100	82.018	Phascolarctos_cinereus
ENSTTRG00000012660	LIG4	99	64.182	ENSPFOG00000000797	lig4	99	64.066	Poecilia_formosa
ENSTTRG00000012660	LIG4	99	64.071	ENSPLAG00000001196	lig4	99	63.956	Poecilia_latipinna
ENSTTRG00000012660	LIG4	99	64.294	ENSPMEG00000021353	lig4	99	64.176	Poecilia_mexicana
ENSTTRG00000012660	LIG4	99	64.405	ENSPREG00000007323	lig4	99	63.956	Poecilia_reticulata
ENSTTRG00000012660	LIG4	100	89.352	ENSPPYG00000005540	LIG4	100	89.352	Pongo_abelii
ENSTTRG00000012660	LIG4	100	88.694	ENSPVAG00000016403	LIG4	100	88.694	Pteropus_vampyrus
ENSTTRG00000012660	LIG4	99	64.906	ENSPNYG00000009660	lig4	99	64.906	Pundamilia_nyererei
ENSTTRG00000012660	LIG4	100	64.294	ENSPNAG00000028056	lig4	100	64.294	Pygocentrus_nattereri
ENSTTRG00000012660	LIG4	100	64.294	ENSPNAG00000028069	LIG4	100	64.294	Pygocentrus_nattereri
ENSTTRG00000012660	LIG4	100	84.852	ENSRNOG00000014605	Lig4	100	84.852	Rattus_norvegicus
ENSTTRG00000012660	LIG4	100	87.925	ENSRBIG00000039962	LIG4	100	87.925	Rhinopithecus_bieti
ENSTTRG00000012660	LIG4	100	88.913	ENSRROG00000006040	LIG4	100	88.913	Rhinopithecus_roxellana
ENSTTRG00000012660	LIG4	100	88.255	ENSSBOG00000019029	LIG4	100	88.255	Saimiri_boliviensis_boliviensis
ENSTTRG00000012660	LIG4	100	79.057	ENSSHAG00000009525	LIG4	100	79.057	Sarcophilus_harrisii
ENSTTRG00000012660	LIG4	100	64.956	ENSSFOG00015012835	lig4	100	64.956	Scleropages_formosus
ENSTTRG00000012660	LIG4	99	62.237	ENSSMAG00000011267	lig4	99	62.237	Scophthalmus_maximus
ENSTTRG00000012660	LIG4	99	65.410	ENSSDUG00000010343	lig4	98	65.410	Seriola_dumerili
ENSTTRG00000012660	LIG4	99	63.956	ENSSLDG00000003239	lig4	99	63.956	Seriola_lalandi_dorsalis
ENSTTRG00000012660	LIG4	100	82.604	ENSSARG00000006573	LIG4	100	82.604	Sorex_araneus
ENSTTRG00000012660	LIG4	93	76.185	ENSSPUG00000002444	LIG4	100	76.185	Sphenodon_punctatus
ENSTTRG00000012660	LIG4	99	64.615	ENSSPAG00000001609	lig4	99	64.615	Stegastes_partitus
ENSTTRG00000012660	LIG4	99	89.109	ENSSSCG00000009540	LIG4	99	89.109	Sus_scrofa
ENSTTRG00000012660	LIG4	99	73.341	ENSTGUG00000010795	LIG4	99	73.341	Taeniopygia_guttata
ENSTTRG00000012660	LIG4	99	64.066	ENSTRUG00000009984	lig4	99	64.066	Takifugu_rubripes
ENSTTRG00000012660	LIG4	99	64.945	ENSTNIG00000010348	lig4	99	65.165	Tetraodon_nigroviridis
ENSTTRG00000012660	LIG4	100	88.694	ENSTBEG00000017741	LIG4	100	88.694	Tupaia_belangeri
ENSTTRG00000012660	LIG4	100	89.462	ENSUAMG00000003773	LIG4	100	89.462	Ursus_americanus
ENSTTRG00000012660	LIG4	99	70.925	ENSXETG00000002654	lig4	99	70.925	Xenopus_tropicalis
ENSTTRG00000012660	LIG4	99	64.182	ENSXCOG00000017401	lig4	99	63.736	Xiphophorus_couchianus
ENSTTRG00000012660	LIG4	99	64.667	ENSXMAG00000015142	lig4	99	64.215	Xiphophorus_maculatus