EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000013190 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 42087 bases
Position: chrscaffold_90606:81164-123250
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000012517	DND1_DSRM	PF14709.7	1.2e-24	1	1
ENSTTRP00000012517	RRM_1	PF00076.22	2.1e-27	1	2
ENSTTRP00000012517	RRM_1	PF00076.22	2.1e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000013193	A1CF-201	1782	-	ENSTTRP00000012517	593 (aa)	-	UPI00018B5E44

Gene Model

Click here to download ENSTTRG00000013190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000013190's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000013190	A1CF	69	55.687	ENSTTRG00000002839	RBM47	69	55.924
ENSTTRG00000013190	A1CF	69	66.312	ENSTTRG00000001239	RBM46	71	66.312

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000013190	A1CF	100	88.235	ENSG00000148584	A1CF	100	88.067	Homo_sapiens
ENSTTRG00000013190	A1CF	95	69.097	ENSAPOG00000008259	a1cf	97	69.097	Acanthochromis_polyacanthus
ENSTTRG00000013190	A1CF	95	86.308	ENSAMEG00000000523	A1CF	97	86.655	Ailuropoda_melanoleuca
ENSTTRG00000013190	A1CF	95	71.160	ENSACIG00000008632	a1cf	97	72.184	Amphilophus_citrinellus
ENSTTRG00000013190	A1CF	95	69.692	ENSAOCG00000023744	a1cf	97	70.548	Amphiprion_ocellaris
ENSTTRG00000013190	A1CF	94	69.828	ENSAPEG00000009537	a1cf	95	70.690	Amphiprion_percula
ENSTTRG00000013190	A1CF	94	72.696	ENSATEG00000013720	a1cf	95	73.913	Anabas_testudineus
ENSTTRG00000013190	A1CF	95	80.969	ENSAPLG00000002964	A1CF	97	80.796	Anas_platyrhynchos
ENSTTRG00000013190	A1CF	95	78.772	ENSACAG00000015269	A1CF	97	78.246	Anolis_carolinensis
ENSTTRG00000013190	A1CF	100	87.231	ENSANAG00000019974	A1CF	100	86.899	Aotus_nancymaae
ENSTTRG00000013190	A1CF	95	69.060	ENSACLG00000017428	a1cf	97	70.598	Astatotilapia_calliptera
ENSTTRG00000013190	A1CF	89	72.426	ENSAMXG00000018180	a1cf	93	72.426	Astyanax_mexicanus
ENSTTRG00000013190	A1CF	95	90.685	ENSBTAG00000021195	A1CF	97	91.154	Bos_taurus
ENSTTRG00000013190	A1CF	95	87.868	ENSCJAG00000005045	A1CF	97	87.522	Callithrix_jacchus
ENSTTRG00000013190	A1CF	95	86.828	ENSCAFG00000015581	A1CF	97	86.828	Canis_familiaris
ENSTTRG00000013190	A1CF	95	86.828	ENSCAFG00020026421	A1CF	98	88.552	Canis_lupus_dingo
ENSTTRG00000013190	A1CF	95	88.562	ENSCHIG00000020411	A1CF	97	88.562	Capra_hircus
ENSTTRG00000013190	A1CF	100	84.859	ENSTSYG00000001755	A1CF	100	89.892	Carlito_syrichta
ENSTTRG00000013190	A1CF	85	85.124	ENSCAPG00000017386	A1CF	90	83.806	Cavia_aperea
ENSTTRG00000013190	A1CF	95	87.002	ENSCPOG00000009807	A1CF	97	86.655	Cavia_porcellus
ENSTTRG00000013190	A1CF	100	86.733	ENSCCAG00000018168	A1CF	100	86.235	Cebus_capucinus
ENSTTRG00000013190	A1CF	100	84.411	ENSCATG00000043715	A1CF	97	87.873	Cercocebus_atys
ENSTTRG00000013190	A1CF	95	87.197	ENSCLAG00000010424	A1CF	97	87.197	Chinchilla_lanigera
ENSTTRG00000013190	A1CF	95	87.002	ENSCSAG00000007032	A1CF	97	86.828	Chlorocebus_sabaeus
ENSTTRG00000013190	A1CF	100	85.546	ENSCHOG00000009089	A1CF	100	85.546	Choloepus_hoffmanni
ENSTTRG00000013190	A1CF	95	80.623	ENSCPBG00000026464	A1CF	97	80.623	Chrysemys_picta_bellii
ENSTTRG00000013190	A1CF	100	84.176	ENSCANG00000038032	A1CF	100	84.013	Colobus_angolensis_palliatus
ENSTTRG00000013190	A1CF	95	85.095	ENSCGRG00001017413	A1cf	97	85.095	Cricetulus_griseus_chok1gshd
ENSTTRG00000013190	A1CF	95	84.402	ENSCGRG00000017332	A1cf	97	84.402	Cricetulus_griseus_crigri
ENSTTRG00000013190	A1CF	94	71.278	ENSCSEG00000002361	a1cf	95	72.154	Cynoglossus_semilaevis
ENSTTRG00000013190	A1CF	94	71.652	ENSCVAG00000010520	a1cf	95	72.870	Cyprinodon_variegatus
ENSTTRG00000013190	A1CF	95	73.739	ENSDARG00000002968	a1cf	97	74.957	Danio_rerio
ENSTTRG00000013190	A1CF	96	86.106	ENSDNOG00000002829	A1CF	98	86.106	Dasypus_novemcinctus
ENSTTRG00000013190	A1CF	84	89.806	ENSETEG00000012527	A1CF	84	89.320	Echinops_telfairi
ENSTTRG00000013190	A1CF	96	88.468	ENSEASG00005012924	A1CF	100	88.640	Equus_asinus_asinus
ENSTTRG00000013190	A1CF	95	87.737	ENSECAG00000010424	A1CF	97	87.910	Equus_caballus
ENSTTRG00000013190	A1CF	77	77.342	ENSEEUG00000000013	A1CF	97	78.281	Erinaceus_europaeus
ENSTTRG00000013190	A1CF	96	71.307	ENSELUG00000003159	a1cf	98	71.986	Esox_lucius
ENSTTRG00000013190	A1CF	100	84.053	ENSFCAG00000011179	A1CF	100	84.219	Felis_catus
ENSTTRG00000013190	A1CF	95	81.579	ENSFALG00000013183	A1CF	97	81.404	Ficedula_albicollis
ENSTTRG00000013190	A1CF	95	87.346	ENSFDAG00000019371	A1CF	97	87.346	Fukomys_damarensis
ENSTTRG00000013190	A1CF	86	71.537	ENSFHEG00000019652	a1cf	90	73.055	Fundulus_heteroclitus
ENSTTRG00000013190	A1CF	95	65.646	ENSGMOG00000018943	a1cf	97	65.476	Gadus_morhua
ENSTTRG00000013190	A1CF	99	78.992	ENSGALG00000003765	A1CF	99	78.824	Gallus_gallus
ENSTTRG00000013190	A1CF	94	66.608	ENSGAFG00000014868	a1cf	95	67.663	Gambusia_affinis
ENSTTRG00000013190	A1CF	96	67.563	ENSGACG00000010241	a1cf	98	68.067	Gasterosteus_aculeatus
ENSTTRG00000013190	A1CF	93	82.416	ENSGAGG00000016508	A1CF	97	82.416	Gopherus_agassizii
ENSTTRG00000013190	A1CF	100	87.065	ENSGGOG00000009670	A1CF	100	86.899	Gorilla_gorilla
ENSTTRG00000013190	A1CF	95	70.990	ENSHBUG00000021959	a1cf	97	72.696	Haplochromis_burtoni
ENSTTRG00000013190	A1CF	95	87.175	ENSHGLG00000008955	A1CF	97	87.175	Heterocephalus_glaber_female
ENSTTRG00000013190	A1CF	95	86.482	ENSHGLG00100000518	A1CF	97	86.482	Heterocephalus_glaber_male
ENSTTRG00000013190	A1CF	89	67.332	ENSHCOG00000017669	a1cf	95	68.322	Hippocampus_comes
ENSTTRG00000013190	A1CF	84	75.290	ENSIPUG00000010367	a1cf	92	75.534	Ictalurus_punctatus
ENSTTRG00000013190	A1CF	95	70.638	ENSKMAG00000006568	a1cf	97	71.309	Kryptolebias_marmoratus
ENSTTRG00000013190	A1CF	95	69.024	ENSLBEG00000020994	a1cf	96	70.370	Labrus_bergylta
ENSTTRG00000013190	A1CF	95	76.440	ENSLACG00000008061	A1CF	97	76.091	Latimeria_chalumnae
ENSTTRG00000013190	A1CF	95	75.258	ENSLOCG00000006302	a1cf	97	75.258	Lepisosteus_oculatus
ENSTTRG00000013190	A1CF	95	86.655	ENSLAFG00000015462	A1CF	97	86.655	Loxodonta_africana
ENSTTRG00000013190	A1CF	100	84.577	ENSMFAG00000035948	A1CF	97	88.225	Macaca_fascicularis
ENSTTRG00000013190	A1CF	100	85.880	ENSMMUG00000007077	A1CF	100	85.714	Macaca_mulatta
ENSTTRG00000013190	A1CF	100	86.070	ENSMNEG00000031454	A1CF	100	85.904	Macaca_nemestrina
ENSTTRG00000013190	A1CF	100	84.411	ENSMLEG00000037223	A1CF	100	84.245	Mandrillus_leucophaeus
ENSTTRG00000013190	A1CF	94	70.280	ENSMAMG00000010402	a1cf	95	72.378	Mastacembelus_armatus
ENSTTRG00000013190	A1CF	95	69.707	ENSMZEG00005013245	a1cf	97	70.740	Maylandia_zebra
ENSTTRG00000013190	A1CF	95	81.002	ENSMGAG00000001507	A1CF	97	80.829	Meleagris_gallopavo
ENSTTRG00000013190	A1CF	95	84.749	ENSMAUG00000007422	A1cf	97	84.749	Mesocricetus_auratus
ENSTTRG00000013190	A1CF	100	84.983	ENSMICG00000003377	A1CF	100	85.149	Microcebus_murinus
ENSTTRG00000013190	A1CF	95	85.269	ENSMOCG00000021536	A1cf	97	85.269	Microtus_ochrogaster
ENSTTRG00000013190	A1CF	87	67.675	ENSMMOG00000009422	a1cf	95	66.084	Mola_mola
ENSTTRG00000013190	A1CF	87	83.301	ENSMODG00000016478	A1CF	93	84.493	Monodelphis_domestica
ENSTTRG00000013190	A1CF	95	68.063	ENSMALG00000012992	a1cf	97	67.539	Monopterus_albus
ENSTTRG00000013190	A1CF	95	85.062	MGP_CAROLIEiJ_G0022873	A1cf	97	85.062	Mus_caroli
ENSTTRG00000013190	A1CF	95	85.062	ENSMUSG00000052595	A1cf	99	86.195	Mus_musculus
ENSTTRG00000013190	A1CF	95	84.359	MGP_PahariEiJ_G0014366	A1cf	97	84.359	Mus_pahari
ENSTTRG00000013190	A1CF	95	84.710	MGP_SPRETEiJ_G0023792	A1cf	97	84.710	Mus_spretus
ENSTTRG00000013190	A1CF	95	83.882	ENSMPUG00000016971	A1CF	97	83.882	Mustela_putorius_furo
ENSTTRG00000013190	A1CF	95	87.002	ENSMLUG00000016071	A1CF	97	87.002	Myotis_lucifugus
ENSTTRG00000013190	A1CF	95	86.308	ENSNGAG00000015136	A1cf	97	86.308	Nannospalax_galili
ENSTTRG00000013190	A1CF	95	71.331	ENSNBRG00000001712	a1cf	97	73.038	Neolamprologus_brichardi
ENSTTRG00000013190	A1CF	100	84.502	ENSNLEG00000012028	A1CF	97	88.215	Nomascus_leucogenys
ENSTTRG00000013190	A1CF	93	85.225	ENSMEUG00000015909	A1CF	100	85.225	Notamacropus_eugenii
ENSTTRG00000013190	A1CF	84	75.345	ENSOPRG00000010667	A1CF	93	75.490	Ochotona_princeps
ENSTTRG00000013190	A1CF	95	71.672	ENSONIG00000019105	a1cf	97	72.526	Oreochromis_niloticus
ENSTTRG00000013190	A1CF	73	81.859	ENSOANG00000007360	A1CF	95	81.859	Ornithorhynchus_anatinus
ENSTTRG00000013190	A1CF	95	87.193	ENSOCUG00000011587	A1CF	97	87.544	Oryctolagus_cuniculus
ENSTTRG00000013190	A1CF	96	67.112	ENSORLG00000013342	a1cf	98	66.778	Oryzias_latipes
ENSTTRG00000013190	A1CF	96	68.833	ENSORLG00020000586	a1cf	98	68.667	Oryzias_latipes_hni
ENSTTRG00000013190	A1CF	96	68.667	ENSORLG00015018569	a1cf	98	68.833	Oryzias_latipes_hsok
ENSTTRG00000013190	A1CF	96	70.847	ENSOMEG00000013531	a1cf	98	70.678	Oryzias_melastigma
ENSTTRG00000013190	A1CF	95	85.269	ENSOGAG00000012884	A1CF	97	85.442	Otolemur_garnettii
ENSTTRG00000013190	A1CF	95	88.562	ENSOARG00000013695	A1CF	97	88.562	Ovis_aries
ENSTTRG00000013190	A1CF	100	86.899	ENSPPAG00000028115	A1CF	100	86.733	Pan_paniscus
ENSTTRG00000013190	A1CF	100	84.718	ENSPPRG00000012180	A1CF	100	84.884	Panthera_pardus
ENSTTRG00000013190	A1CF	100	84.718	ENSPTIG00000021223	A1CF	100	84.884	Panthera_tigris_altaica
ENSTTRG00000013190	A1CF	100	85.358	ENSPTRG00000002508	A1CF	97	88.401	Pan_troglodytes
ENSTTRG00000013190	A1CF	100	84.743	ENSPANG00000021988	A1CF	97	88.225	Papio_anubis
ENSTTRG00000013190	A1CF	96	73.175	ENSPKIG00000025176	a1cf	98	73.005	Paramormyrops_kingsleyae
ENSTTRG00000013190	A1CF	95	82.632	ENSPSIG00000010318	A1CF	97	82.632	Pelodiscus_sinensis
ENSTTRG00000013190	A1CF	92	61.706	ENSPMGG00000013359	a1cf	94	63.934	Periophthalmus_magnuspinnatus
ENSTTRG00000013190	A1CF	95	84.749	ENSPEMG00000015021	A1cf	97	84.749	Peromyscus_maniculatus_bairdii
ENSTTRG00000013190	A1CF	95	83.509	ENSPCIG00000002175	A1CF	97	83.509	Phascolarctos_cinereus
ENSTTRG00000013190	A1CF	94	71.012	ENSPFOG00000006683	a1cf	95	72.213	Poecilia_formosa
ENSTTRG00000013190	A1CF	94	70.840	ENSPFOG00000007437	-	95	72.041	Poecilia_formosa
ENSTTRG00000013190	A1CF	94	71.826	ENSPLAG00000000026	a1cf	95	73.043	Poecilia_latipinna
ENSTTRG00000013190	A1CF	94	71.826	ENSPLAG00000001210	-	95	73.043	Poecilia_latipinna
ENSTTRG00000013190	A1CF	94	63.167	ENSPMEG00000015529	-	94	64.372	Poecilia_mexicana
ENSTTRG00000013190	A1CF	94	64.049	ENSPMEG00000000921	a1cf	94	65.271	Poecilia_mexicana
ENSTTRG00000013190	A1CF	94	70.669	ENSPREG00000016298	a1cf	95	72.041	Poecilia_reticulata
ENSTTRG00000013190	A1CF	95	89.631	ENSPPYG00000002819	A1CF	97	89.631	Pongo_abelii
ENSTTRG00000013190	A1CF	78	73.763	ENSPCAG00000006463	A1CF	70	83.673	Procavia_capensis
ENSTTRG00000013190	A1CF	95	86.505	ENSPCOG00000024172	A1CF	97	86.505	Propithecus_coquereli
ENSTTRG00000013190	A1CF	95	70.202	ENSPNYG00000017944	a1cf	97	71.886	Pundamilia_nyererei
ENSTTRG00000013190	A1CF	95	75.779	ENSPNAG00000007704	a1cf	97	75.606	Pygocentrus_nattereri
ENSTTRG00000013190	A1CF	95	85.237	ENSRNOG00000033195	A1cf	97	85.237	Rattus_norvegicus
ENSTTRG00000013190	A1CF	95	80.484	ENSRBIG00000042892	A1CF	100	88.072	Rhinopithecus_bieti
ENSTTRG00000013190	A1CF	100	85.240	ENSRROG00000041398	A1CF	100	89.803	Rhinopithecus_roxellana
ENSTTRG00000013190	A1CF	100	87.562	ENSSBOG00000021930	A1CF	100	90.457	Saimiri_boliviensis_boliviensis
ENSTTRG00000013190	A1CF	95	82.807	ENSSHAG00000005096	A1CF	97	82.807	Sarcophilus_harrisii
ENSTTRG00000013190	A1CF	96	74.271	ENSSFOG00015011774	a1cf	98	74.614	Scleropages_formosus
ENSTTRG00000013190	A1CF	95	70.420	ENSSMAG00000013271	a1cf	97	70.420	Scophthalmus_maximus
ENSTTRG00000013190	A1CF	94	71.678	ENSSDUG00000013930	a1cf	95	72.203	Seriola_dumerili
ENSTTRG00000013190	A1CF	94	66.667	ENSSLDG00000004290	a1cf	95	67.549	Seriola_lalandi_dorsalis
ENSTTRG00000013190	A1CF	99	77.949	ENSSARG00000005940	A1CF	99	77.949	Sorex_araneus
ENSTTRG00000013190	A1CF	99	78.319	ENSSPUG00000006797	A1CF	99	78.319	Sphenodon_punctatus
ENSTTRG00000013190	A1CF	95	89.081	ENSSSCG00000010431	A1CF	97	89.081	Sus_scrofa
ENSTTRG00000013190	A1CF	95	80.862	ENSTGUG00000005090	A1CF	97	80.517	Taeniopygia_guttata
ENSTTRG00000013190	A1CF	94	70.103	ENSTRUG00000001982	a1cf	95	69.759	Takifugu_rubripes
ENSTTRG00000013190	A1CF	94	70.034	ENSTNIG00000003580	a1cf	95	69.692	Tetraodon_nigroviridis
ENSTTRG00000013190	A1CF	95	88.049	ENSUAMG00000020065	A1CF	97	87.873	Ursus_americanus
ENSTTRG00000013190	A1CF	95	86.482	ENSUMAG00000011162	A1CF	97	88.434	Ursus_maritimus
ENSTTRG00000013190	A1CF	99	78.885	ENSVPAG00000006130	A1CF	99	78.885	Vicugna_pacos
ENSTTRG00000013190	A1CF	95	88.049	ENSVVUG00000002504	A1CF	97	87.873	Vulpes_vulpes
ENSTTRG00000013190	A1CF	95	71.649	ENSXETG00000006611	a1cf	97	71.649	Xenopus_tropicalis
ENSTTRG00000013190	A1CF	94	73.380	ENSXCOG00000003302	a1cf	95	74.081	Xiphophorus_couchianus
ENSTTRG00000013190	A1CF	94	72.366	ENSXMAG00000016703	a1cf	95	73.057	Xiphophorus_maculatus