EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000013438 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 145949 bases
Position: chrscaffold_106943:13923-159871
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000012759	ResIII	PF04851.15	6.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000013448	CHD6-201	8154	-	ENSTTRP00000012759	2717 (aa)	-	UPI00018B6E8C

Gene Model

Click here to download ENSTTRG00000013438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000013438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000013438	CHD6	61	60.115	ENSTTRG00000016076	CHD8	65	61.397
ENSTTRG00000013438	CHD6	68	58.792	ENSTTRG00000012674	CHD9	56	64.356
ENSTTRG00000013438	CHD6	67	70.588	ENSTTRG00000004221	CHD7	68	70.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000013438	CHD6	100	88.216	ENSG00000124177	CHD6	99	95.918	Homo_sapiens
ENSTTRG00000013438	CHD6	71	78.595	ENSAPOG00000013736	chd6	62	80.017	Acanthochromis_polyacanthus
ENSTTRG00000013438	CHD6	100	89.085	ENSAMEG00000009496	CHD6	100	89.085	Ailuropoda_melanoleuca
ENSTTRG00000013438	CHD6	76	75.076	ENSATEG00000005608	chd6	61	78.904	Anabas_testudineus
ENSTTRG00000013438	CHD6	93	75.895	ENSAPLG00000015592	CHD6	99	70.084	Anas_platyrhynchos
ENSTTRG00000013438	CHD6	99	65.278	ENSACAG00000006842	CHD6	99	65.984	Anolis_carolinensis
ENSTTRG00000013438	CHD6	100	87.592	ENSANAG00000037548	CHD6	99	91.376	Aotus_nancymaae
ENSTTRG00000013438	CHD6	77	71.973	ENSAMXG00000009576	chd6	72	73.745	Astyanax_mexicanus
ENSTTRG00000013438	CHD6	100	89.493	ENSBTAG00000005733	CHD6	100	89.493	Bos_taurus
ENSTTRG00000013438	CHD6	100	87.555	ENSCJAG00000017920	CHD6	99	91.193	Callithrix_jacchus
ENSTTRG00000013438	CHD6	100	89.228	ENSCAFG00000009236	CHD6	100	89.228	Canis_familiaris
ENSTTRG00000013438	CHD6	99	88.483	ENSCAFG00020012906	CHD6	99	95.963	Canis_lupus_dingo
ENSTTRG00000013438	CHD6	100	89.273	ENSCHIG00000017606	CHD6	100	89.273	Capra_hircus
ENSTTRG00000013438	CHD6	84	87.265	ENSTSYG00000014635	CHD6	100	87.265	Carlito_syrichta
ENSTTRG00000013438	CHD6	100	87.105	ENSCPOG00000015641	CHD6	100	87.105	Cavia_porcellus
ENSTTRG00000013438	CHD6	100	87.812	ENSCCAG00000036828	CHD6	99	91.376	Cebus_capucinus
ENSTTRG00000013438	CHD6	100	87.812	ENSCATG00000039248	CHD6	99	91.376	Cercocebus_atys
ENSTTRG00000013438	CHD6	100	86.987	ENSCLAG00000013743	CHD6	100	86.987	Chinchilla_lanigera
ENSTTRG00000013438	CHD6	100	88.179	ENSCSAG00000013997	CHD6	100	88.179	Chlorocebus_sabaeus
ENSTTRG00000013438	CHD6	91	85.771	ENSCHOG00000012647	CHD6	95	85.771	Choloepus_hoffmanni
ENSTTRG00000013438	CHD6	91	79.672	ENSCPBG00000019382	CHD6	99	70.867	Chrysemys_picta_bellii
ENSTTRG00000013438	CHD6	100	87.959	ENSCANG00000043435	CHD6	99	91.376	Colobus_angolensis_palliatus
ENSTTRG00000013438	CHD6	100	84.974	ENSCGRG00001002694	Chd6	100	85.011	Cricetulus_griseus_chok1gshd
ENSTTRG00000013438	CHD6	80	74.157	ENSDARG00000017244	chd6	78	74.157	Danio_rerio
ENSTTRG00000013438	CHD6	99	85.993	ENSDNOG00000004176	CHD6	99	85.993	Dasypus_novemcinctus
ENSTTRG00000013438	CHD6	99	89.086	ENSEASG00005023433	CHD6	95	95.560	Equus_asinus_asinus
ENSTTRG00000013438	CHD6	99	89.926	ENSECAG00000011761	CHD6	100	89.926	Equus_caballus
ENSTTRG00000013438	CHD6	69	81.623	ENSELUG00000012309	chd6	86	81.623	Esox_lucius
ENSTTRG00000013438	CHD6	100	89.085	ENSFCAG00000003572	CHD6	100	89.085	Felis_catus
ENSTTRG00000013438	CHD6	95	75.386	ENSFALG00000012563	CHD6	94	75.453	Ficedula_albicollis
ENSTTRG00000013438	CHD6	99	86.915	ENSFDAG00000013791	CHD6	99	86.915	Fukomys_damarensis
ENSTTRG00000013438	CHD6	67	75.847	ENSGMOG00000011715	chd6	79	77.277	Gadus_morhua
ENSTTRG00000013438	CHD6	77	73.552	ENSGACG00000000037	chd6	83	73.127	Gasterosteus_aculeatus
ENSTTRG00000013438	CHD6	100	88.253	ENSGGOG00000013123	CHD6	99	91.376	Gorilla_gorilla
ENSTTRG00000013438	CHD6	75	76.604	ENSHBUG00000014701	chd6	60	82.982	Haplochromis_burtoni
ENSTTRG00000013438	CHD6	100	87.000	ENSHGLG00000004548	CHD6	100	87.036	Heterocephalus_glaber_female
ENSTTRG00000013438	CHD6	100	87.000	ENSHGLG00100006401	CHD6	100	87.036	Heterocephalus_glaber_male
ENSTTRG00000013438	CHD6	74	79.690	ENSIPUG00000003692	chd6	73	81.023	Ictalurus_punctatus
ENSTTRG00000013438	CHD6	100	87.399	ENSSTOG00000013382	CHD6	100	87.399	Ictidomys_tridecemlineatus
ENSTTRG00000013438	CHD6	85	79.060	ENSLACG00000010881	CHD6	86	79.131	Latimeria_chalumnae
ENSTTRG00000013438	CHD6	71	81.648	ENSLOCG00000007386	chd6	87	76.258	Lepisosteus_oculatus
ENSTTRG00000013438	CHD6	100	88.101	ENSLAFG00000012144	CHD6	100	88.101	Loxodonta_africana
ENSTTRG00000013438	CHD6	100	88.142	ENSMFAG00000032830	CHD6	99	91.376	Macaca_fascicularis
ENSTTRG00000013438	CHD6	100	88.142	ENSMMUG00000020458	CHD6	99	91.376	Macaca_mulatta
ENSTTRG00000013438	CHD6	100	88.142	ENSMNEG00000040847	CHD6	99	91.376	Macaca_nemestrina
ENSTTRG00000013438	CHD6	100	87.748	ENSMLEG00000031965	CHD6	99	91.376	Mandrillus_leucophaeus
ENSTTRG00000013438	CHD6	75	75.846	ENSMAMG00000013111	chd6	65	74.492	Mastacembelus_armatus
ENSTTRG00000013438	CHD6	99	68.955	ENSMGAG00000001121	CHD6	99	69.613	Meleagris_gallopavo
ENSTTRG00000013438	CHD6	99	87.830	ENSMICG00000016641	CHD6	99	90.642	Microcebus_murinus
ENSTTRG00000013438	CHD6	89	77.246	ENSMODG00000000720	-	99	77.288	Monodelphis_domestica
ENSTTRG00000013438	CHD6	100	83.468	MGP_CAROLIEiJ_G0024604	Chd6	100	92.911	Mus_caroli
ENSTTRG00000013438	CHD6	100	83.688	ENSMUSG00000057133	Chd6	100	92.827	Mus_musculus
ENSTTRG00000013438	CHD6	100	83.505	MGP_PahariEiJ_G0026048	Chd6	100	93.249	Mus_pahari
ENSTTRG00000013438	CHD6	100	83.578	MGP_SPRETEiJ_G0025526	Chd6	100	92.911	Mus_spretus
ENSTTRG00000013438	CHD6	100	87.867	ENSMPUG00000017695	CHD6	100	87.867	Mustela_putorius_furo
ENSTTRG00000013438	CHD6	100	88.832	ENSMLUG00000016247	CHD6	100	88.832	Myotis_lucifugus
ENSTTRG00000013438	CHD6	73	77.469	ENSNBRG00000013839	chd6	75	77.596	Neolamprologus_brichardi
ENSTTRG00000013438	CHD6	100	86.464	ENSNLEG00000006496	CHD6	100	86.574	Nomascus_leucogenys
ENSTTRG00000013438	CHD6	100	83.542	ENSOPRG00000013376	-	100	83.542	Ochotona_princeps
ENSTTRG00000013438	CHD6	82	72.460	ENSONIG00000000393	chd6	86	72.524	Oreochromis_niloticus
ENSTTRG00000013438	CHD6	100	68.571	ENSOANG00000014347	CHD6	99	68.569	Ornithorhynchus_anatinus
ENSTTRG00000013438	CHD6	99	85.588	ENSOCUG00000012394	CHD6	100	85.588	Oryctolagus_cuniculus
ENSTTRG00000013438	CHD6	75	75.878	ENSORLG00020021891	chd6	95	83.968	Oryzias_latipes_hni
ENSTTRG00000013438	CHD6	99	86.576	ENSOGAG00000002427	CHD6	99	86.576	Otolemur_garnettii
ENSTTRG00000013438	CHD6	99	86.806	ENSOARG00000002597	CHD6	100	86.843	Ovis_aries
ENSTTRG00000013438	CHD6	100	89.195	ENSPPRG00000014756	CHD6	100	89.195	Panthera_pardus
ENSTTRG00000013438	CHD6	100	89.085	ENSPTIG00000011094	CHD6	100	89.085	Panthera_tigris_altaica
ENSTTRG00000013438	CHD6	100	88.289	ENSPTRG00000013504	CHD6	99	91.376	Pan_troglodytes
ENSTTRG00000013438	CHD6	100	88.069	ENSPANG00000025554	CHD6	99	91.193	Papio_anubis
ENSTTRG00000013438	CHD6	73	78.756	ENSPKIG00000005578	chd6	78	73.643	Paramormyrops_kingsleyae
ENSTTRG00000013438	CHD6	72	82.401	ENSPMGG00000014877	chd6	87	79.245	Periophthalmus_magnuspinnatus
ENSTTRG00000013438	CHD6	100	76.402	ENSPCIG00000028037	CHD6	100	76.878	Phascolarctos_cinereus
ENSTTRG00000013438	CHD6	68	76.549	ENSPLAG00000003128	chd6	60	79.382	Poecilia_latipinna
ENSTTRG00000013438	CHD6	65	79.950	ENSPREG00000022653	chd6	99	84.615	Poecilia_reticulata
ENSTTRG00000013438	CHD6	100	88.367	ENSPPYG00000011016	CHD6	100	88.367	Pongo_abelii
ENSTTRG00000013438	CHD6	99	88.350	ENSPCOG00000001089	CHD6	99	91.193	Propithecus_coquereli
ENSTTRG00000013438	CHD6	73	79.251	ENSPNYG00000022516	chd6	76	76.157	Pundamilia_nyererei
ENSTTRG00000013438	CHD6	77	73.751	ENSPNAG00000012825	chd6	75	74.066	Pygocentrus_nattereri
ENSTTRG00000013438	CHD6	100	83.395	ENSRNOG00000016744	Chd6	100	83.395	Rattus_norvegicus
ENSTTRG00000013438	CHD6	100	87.812	ENSSBOG00000022089	CHD6	99	91.376	Saimiri_boliviensis_boliviensis
ENSTTRG00000013438	CHD6	99	76.274	ENSSHAG00000017072	CHD6	99	76.751	Sarcophilus_harrisii
ENSTTRG00000013438	CHD6	74	81.414	ENSSFOG00015012920	chd6	74	81.414	Scleropages_formosus
ENSTTRG00000013438	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSTTRG00000013438	CHD6	100	90.775	ENSSSCG00000007360	CHD6	100	91.199	Sus_scrofa
ENSTTRG00000013438	CHD6	94	87.566	ENSTGUG00000003179	CHD6	98	71.013	Taeniopygia_guttata
ENSTTRG00000013438	CHD6	75	75.161	ENSTNIG00000017487	chd6	83	79.881	Tetraodon_nigroviridis
ENSTTRG00000013438	CHD6	100	86.811	ENSUAMG00000024036	CHD6	95	94.015	Ursus_americanus
ENSTTRG00000013438	CHD6	99	89.266	ENSUMAG00000002017	CHD6	95	94.015	Ursus_maritimus
ENSTTRG00000013438	CHD6	90	89.573	ENSVPAG00000007941	CHD6	93	89.573	Vicugna_pacos
ENSTTRG00000013438	CHD6	100	89.118	ENSVVUG00000029164	CHD6	100	89.118	Vulpes_vulpes
ENSTTRG00000013438	CHD6	88	67.657	ENSXETG00000021445	chd6	88	67.538	Xenopus_tropicalis