EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000013588 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 35290 bases
Position: chrGeneScaffold_1223:60737-96026
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000012895	RRM_5	PF13893.6	5.9e-07	1	1
ENSTTRP00000012895	RRM_1	PF00076.22	2e-13	1	1
ENSTTRP00000012895	SAP	PF02037.27	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000013588	SAFB-201	2739	-	ENSTTRP00000012895	912 (aa)	-	UPI00018B62C1

Gene Model

Click here to download ENSTTRG00000013588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000013588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000013588	SAFB	52	74.021	ENSTTRG00000013585	SAFB2	84	64.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000013588	SAFB	92	98.413	ENSG00000160633	SAFB	94	98.413	Homo_sapiens
ENSTTRG00000013588	SAFB	57	75.000	ENSAPOG00000022508	safb	65	75.000	Acanthochromis_polyacanthus
ENSTTRG00000013588	SAFB	92	93.011	ENSAMEG00000012254	SAFB	91	100.000	Ailuropoda_melanoleuca
ENSTTRG00000013588	SAFB	79	75.000	ENSACIG00000006247	safb	80	75.000	Amphilophus_citrinellus
ENSTTRG00000013588	SAFB	60	75.000	ENSAOCG00000006308	safb	64	75.000	Amphiprion_ocellaris
ENSTTRG00000013588	SAFB	55	75.000	ENSAPEG00000023342	safb	65	75.000	Amphiprion_percula
ENSTTRG00000013588	SAFB	64	75.000	ENSATEG00000004998	safb	65	75.000	Anabas_testudineus
ENSTTRG00000013588	SAFB	85	62.972	ENSAPLG00000005780	-	91	63.476	Anas_platyrhynchos
ENSTTRG00000013588	SAFB	82	62.451	ENSAPLG00000006355	-	91	64.016	Anas_platyrhynchos
ENSTTRG00000013588	SAFB	92	98.413	ENSANAG00000028821	SAFB	94	98.413	Aotus_nancymaae
ENSTTRG00000013588	SAFB	73	75.000	ENSACLG00000001926	safb	83	75.000	Astatotilapia_calliptera
ENSTTRG00000013588	SAFB	63	60.714	ENSAMXG00000018154	safb	83	76.316	Astyanax_mexicanus
ENSTTRG00000013588	SAFB	92	92.692	ENSBTAG00000007875	SAFB	92	92.179	Bos_taurus
ENSTTRG00000013588	SAFB	75	98.413	ENSCJAG00000017081	SAFB	100	91.806	Callithrix_jacchus
ENSTTRG00000013588	SAFB	92	98.413	ENSCAFG00000018803	SAFB	80	98.413	Canis_familiaris
ENSTTRG00000013588	SAFB	92	98.413	ENSCAFG00020018943	SAFB	92	98.413	Canis_lupus_dingo
ENSTTRG00000013588	SAFB	92	92.063	ENSCHIG00000007262	SAFB	92	92.063	Capra_hircus
ENSTTRG00000013588	SAFB	58	77.925	ENSTSYG00000001851	-	100	76.938	Carlito_syrichta
ENSTTRG00000013588	SAFB	74	81.113	ENSCAPG00000012121	SAFB	88	81.225	Cavia_aperea
ENSTTRG00000013588	SAFB	92	96.825	ENSCPOG00000026322	SAFB	92	96.825	Cavia_porcellus
ENSTTRG00000013588	SAFB	92	98.413	ENSCCAG00000020193	SAFB	94	98.413	Cebus_capucinus
ENSTTRG00000013588	SAFB	92	98.413	ENSCATG00000029994	SAFB	94	98.413	Cercocebus_atys
ENSTTRG00000013588	SAFB	92	98.413	ENSCLAG00000007734	SAFB	92	98.413	Chinchilla_lanigera
ENSTTRG00000013588	SAFB	92	98.413	ENSCSAG00000009949	SAFB	92	98.413	Chlorocebus_sabaeus
ENSTTRG00000013588	SAFB	79	85.714	ENSCHOG00000003208	SAFB	85	85.714	Choloepus_hoffmanni
ENSTTRG00000013588	SAFB	85	59.664	ENSCPBG00000010936	-	93	60.264	Chrysemys_picta_bellii
ENSTTRG00000013588	SAFB	85	62.421	ENSCPBG00000010928	-	93	63.304	Chrysemys_picta_bellii
ENSTTRG00000013588	SAFB	92	93.651	ENSCANG00000019754	-	92	93.651	Colobus_angolensis_palliatus
ENSTTRG00000013588	SAFB	88	98.413	ENSCANG00000004774	-	93	98.413	Colobus_angolensis_palliatus
ENSTTRG00000013588	SAFB	92	92.063	ENSCGRG00001002254	Safb	93	92.063	Cricetulus_griseus_chok1gshd
ENSTTRG00000013588	SAFB	85	80.769	ENSCGRG00000011529	Safb	89	81.390	Cricetulus_griseus_crigri
ENSTTRG00000013588	SAFB	79	77.778	ENSCSEG00000019870	safb	88	77.778	Cynoglossus_semilaevis
ENSTTRG00000013588	SAFB	67	75.000	ENSCVAG00000002226	safb	74	75.000	Cyprinodon_variegatus
ENSTTRG00000013588	SAFB	75	69.048	ENSDARG00000020467	safb	76	71.795	Danio_rerio
ENSTTRG00000013588	SAFB	92	98.413	ENSDNOG00000015746	SAFB	80	98.413	Dasypus_novemcinctus
ENSTTRG00000013588	SAFB	92	93.651	ENSDORG00000016200	Safb	92	93.651	Dipodomys_ordii
ENSTTRG00000013588	SAFB	75	84.058	ENSETEG00000018679	SAFB	80	84.058	Echinops_telfairi
ENSTTRG00000013588	SAFB	92	98.413	ENSEASG00005023019	SAFB	94	98.413	Equus_asinus_asinus
ENSTTRG00000013588	SAFB	92	98.413	ENSECAG00000018659	SAFB	82	98.413	Equus_caballus
ENSTTRG00000013588	SAFB	87	69.231	ENSELUG00000022327	safb	79	69.231	Esox_lucius
ENSTTRG00000013588	SAFB	92	100.000	ENSFCAG00000011835	SAFB	92	100.000	Felis_catus
ENSTTRG00000013588	SAFB	52	59.252	ENSFALG00000013881	-	94	60.770	Ficedula_albicollis
ENSTTRG00000013588	SAFB	92	67.692	ENSFALG00000013882	-	82	86.111	Ficedula_albicollis
ENSTTRG00000013588	SAFB	88	96.825	ENSFDAG00000020306	SAFB	91	96.825	Fukomys_damarensis
ENSTTRG00000013588	SAFB	62	75.000	ENSFHEG00000004219	safb	90	75.000	Fundulus_heteroclitus
ENSTTRG00000013588	SAFB	63	72.222	ENSGMOG00000014280	safb	75	72.222	Gadus_morhua
ENSTTRG00000013588	SAFB	92	63.077	ENSGALG00000013365	-	89	83.333	Gallus_gallus
ENSTTRG00000013588	SAFB	79	72.222	ENSGAFG00000016162	safb	86	72.222	Gambusia_affinis
ENSTTRG00000013588	SAFB	63	72.222	ENSGACG00000011385	safb	64	72.222	Gasterosteus_aculeatus
ENSTTRG00000013588	SAFB	88	66.154	ENSGAGG00000008424	-	89	86.111	Gopherus_agassizii
ENSTTRG00000013588	SAFB	72	58.370	ENSGAGG00000017702	-	100	59.407	Gopherus_agassizii
ENSTTRG00000013588	SAFB	92	98.413	ENSGGOG00000015109	SAFB	94	98.413	Gorilla_gorilla
ENSTTRG00000013588	SAFB	82	75.000	ENSHBUG00000009218	safb	84	75.000	Haplochromis_burtoni
ENSTTRG00000013588	SAFB	92	98.413	ENSHGLG00000015883	SAFB	92	98.413	Heterocephalus_glaber_female
ENSTTRG00000013588	SAFB	81	98.413	ENSHGLG00100004228	SAFB	92	98.413	Heterocephalus_glaber_male
ENSTTRG00000013588	SAFB	52	45.968	ENSHCOG00000001705	safb	65	47.578	Hippocampus_comes
ENSTTRG00000013588	SAFB	62	66.000	ENSIPUG00000024869	safb2	84	78.947	Ictalurus_punctatus
ENSTTRG00000013588	SAFB	85	87.218	ENSSTOG00000002783	SAFB	92	87.845	Ictidomys_tridecemlineatus
ENSTTRG00000013588	SAFB	92	90.476	ENSJJAG00000009021	Safb	94	84.127	Jaculus_jaculus
ENSTTRG00000013588	SAFB	56	75.000	ENSKMAG00000022308	safb	65	75.000	Kryptolebias_marmoratus
ENSTTRG00000013588	SAFB	82	77.778	ENSLBEG00000006015	safb	81	77.778	Labrus_bergylta
ENSTTRG00000013588	SAFB	56	71.053	ENSLACG00000018090	SAFB	92	71.053	Latimeria_chalumnae
ENSTTRG00000013588	SAFB	89	81.081	ENSLOCG00000003613	safb	87	81.081	Lepisosteus_oculatus
ENSTTRG00000013588	SAFB	91	96.825	ENSLAFG00000003840	SAFB	92	96.825	Loxodonta_africana
ENSTTRG00000013588	SAFB	92	98.413	ENSMFAG00000003885	SAFB	94	98.413	Macaca_fascicularis
ENSTTRG00000013588	SAFB	92	98.413	ENSMMUG00000017970	SAFB	94	98.413	Macaca_mulatta
ENSTTRG00000013588	SAFB	92	98.413	ENSMNEG00000035637	SAFB	94	98.413	Macaca_nemestrina
ENSTTRG00000013588	SAFB	92	98.413	ENSMLEG00000038637	SAFB	92	98.413	Mandrillus_leucophaeus
ENSTTRG00000013588	SAFB	63	72.222	ENSMAMG00000003357	safb	58	72.222	Mastacembelus_armatus
ENSTTRG00000013588	SAFB	75	75.000	ENSMZEG00005009120	safb	83	75.000	Maylandia_zebra
ENSTTRG00000013588	SAFB	82	60.317	ENSMGAG00000001051	-	88	80.556	Meleagris_gallopavo
ENSTTRG00000013588	SAFB	85	62.753	ENSMGAG00000001101	-	88	62.879	Meleagris_gallopavo
ENSTTRG00000013588	SAFB	53	87.705	ENSMAUG00000005013	Safb	100	88.115	Mesocricetus_auratus
ENSTTRG00000013588	SAFB	92	96.825	ENSMICG00000008739	-	94	96.825	Microcebus_murinus
ENSTTRG00000013588	SAFB	78	96.825	ENSMICG00000046795	-	90	96.825	Microcebus_murinus
ENSTTRG00000013588	SAFB	92	95.238	ENSMOCG00000014040	Safb	92	95.238	Microtus_ochrogaster
ENSTTRG00000013588	SAFB	92	82.540	ENSMODG00000001236	SAFB	90	92.308	Monodelphis_domestica
ENSTTRG00000013588	SAFB	77	75.000	ENSMALG00000020330	safb	80	75.000	Monopterus_albus
ENSTTRG00000013588	SAFB	92	92.063	MGP_CAROLIEiJ_G0021780	Safb	92	92.063	Mus_caroli
ENSTTRG00000013588	SAFB	92	92.063	ENSMUSG00000071054	Safb	92	92.063	Mus_musculus
ENSTTRG00000013588	SAFB	92	93.651	MGP_PahariEiJ_G0020769	Safb	92	93.651	Mus_pahari
ENSTTRG00000013588	SAFB	92	98.413	ENSMPUG00000006123	SAFB	87	98.413	Mustela_putorius_furo
ENSTTRG00000013588	SAFB	92	95.238	ENSMLUG00000001081	SAFB	92	95.238	Myotis_lucifugus
ENSTTRG00000013588	SAFB	92	96.825	ENSNGAG00000019882	Safb	92	96.825	Nannospalax_galili
ENSTTRG00000013588	SAFB	88	98.413	ENSNLEG00000013551	SAFB	94	98.413	Nomascus_leucogenys
ENSTTRG00000013588	SAFB	81	83.941	ENSOPRG00000011561	-	91	84.211	Ochotona_princeps
ENSTTRG00000013588	SAFB	92	98.413	ENSODEG00000014838	SAFB	92	98.413	Octodon_degus
ENSTTRG00000013588	SAFB	71	75.000	ENSONIG00000002318	safb	79	75.000	Oreochromis_niloticus
ENSTTRG00000013588	SAFB	85	79.188	ENSOCUG00000014628	SAFB	95	77.792	Oryctolagus_cuniculus
ENSTTRG00000013588	SAFB	57	75.000	ENSORLG00000016989	safb	65	75.000	Oryzias_latipes
ENSTTRG00000013588	SAFB	61	75.000	ENSORLG00020000404	safb	65	75.000	Oryzias_latipes_hni
ENSTTRG00000013588	SAFB	61	77.778	ENSORLG00015010733	safb	65	77.778	Oryzias_latipes_hsok
ENSTTRG00000013588	SAFB	60	75.000	ENSOMEG00000009066	safb	64	75.000	Oryzias_melastigma
ENSTTRG00000013588	SAFB	92	98.413	ENSOGAG00000027769	SAFB	92	98.413	Otolemur_garnettii
ENSTTRG00000013588	SAFB	71	84.938	ENSOARG00000007856	-	90	84.211	Ovis_aries
ENSTTRG00000013588	SAFB	92	92.063	ENSOARG00000007662	-	92	92.063	Ovis_aries
ENSTTRG00000013588	SAFB	92	98.413	ENSPPAG00000035129	SAFB	94	98.413	Pan_paniscus
ENSTTRG00000013588	SAFB	92	100.000	ENSPPRG00000017197	SAFB	92	100.000	Panthera_pardus
ENSTTRG00000013588	SAFB	92	98.413	ENSPTRG00000010335	SAFB	94	98.413	Pan_troglodytes
ENSTTRG00000013588	SAFB	92	98.413	ENSPANG00000007770	SAFB	94	98.413	Papio_anubis
ENSTTRG00000013588	SAFB	85	73.684	ENSPKIG00000009902	safb	79	73.684	Paramormyrops_kingsleyae
ENSTTRG00000013588	SAFB	85	62.423	ENSPSIG00000011679	-	91	62.794	Pelodiscus_sinensis
ENSTTRG00000013588	SAFB	92	66.129	ENSPSIG00000009367	-	89	86.111	Pelodiscus_sinensis
ENSTTRG00000013588	SAFB	92	92.063	ENSPEMG00000020428	Safb	92	92.063	Peromyscus_maniculatus_bairdii
ENSTTRG00000013588	SAFB	58	77.491	ENSPCIG00000009504	-	100	77.675	Phascolarctos_cinereus
ENSTTRG00000013588	SAFB	81	72.222	ENSPFOG00000007745	safb	86	72.222	Poecilia_formosa
ENSTTRG00000013588	SAFB	62	72.222	ENSPLAG00000001614	safb	90	72.222	Poecilia_latipinna
ENSTTRG00000013588	SAFB	62	72.222	ENSPMEG00000021023	safb	90	72.222	Poecilia_mexicana
ENSTTRG00000013588	SAFB	62	72.222	ENSPREG00000012496	safb	66	72.222	Poecilia_reticulata
ENSTTRG00000013588	SAFB	92	98.413	ENSPPYG00000009428	SAFB	92	98.413	Pongo_abelii
ENSTTRG00000013588	SAFB	92	96.825	ENSPCAG00000006475	SAFB	92	96.825	Procavia_capensis
ENSTTRG00000013588	SAFB	92	90.476	ENSPCOG00000014090	SAFB	94	90.476	Propithecus_coquereli
ENSTTRG00000013588	SAFB	88	95.238	ENSPVAG00000004913	SAFB	89	95.238	Pteropus_vampyrus
ENSTTRG00000013588	SAFB	61	76.316	ENSPNAG00000021838	safb	89	76.316	Pygocentrus_nattereri
ENSTTRG00000013588	SAFB	92	95.238	ENSRNOG00000050543	Safb	92	95.238	Rattus_norvegicus
ENSTTRG00000013588	SAFB	92	98.413	ENSRBIG00000042509	SAFB	94	98.413	Rhinopithecus_bieti
ENSTTRG00000013588	SAFB	92	98.413	ENSRROG00000029278	SAFB	94	98.413	Rhinopithecus_roxellana
ENSTTRG00000013588	SAFB	92	98.413	ENSSBOG00000026291	SAFB	94	98.413	Saimiri_boliviensis_boliviensis
ENSTTRG00000013588	SAFB	89	73.684	ENSSFOG00015008156	safb	81	73.684	Scleropages_formosus
ENSTTRG00000013588	SAFB	85	75.000	ENSSMAG00000009316	safb	84	75.000	Scophthalmus_maximus
ENSTTRG00000013588	SAFB	64	75.000	ENSSDUG00000009652	safb	69	75.000	Seriola_dumerili
ENSTTRG00000013588	SAFB	89	75.000	ENSSLDG00000001670	safb	66	75.000	Seriola_lalandi_dorsalis
ENSTTRG00000013588	SAFB	85	84.547	ENSSARG00000010475	SAFB	92	84.547	Sorex_araneus
ENSTTRG00000013588	SAFB	50	58.991	ENSSPUG00000009747	-	93	57.979	Sphenodon_punctatus
ENSTTRG00000013588	SAFB	52	56.582	ENSSPUG00000009820	-	98	61.635	Sphenodon_punctatus
ENSTTRG00000013588	SAFB	60	75.000	ENSSPAG00000015682	safb	72	75.000	Stegastes_partitus
ENSTTRG00000013588	SAFB	92	96.825	ENSSSCG00000013522	SAFB	90	96.825	Sus_scrofa
ENSTTRG00000013588	SAFB	59	60.619	ENSTGUG00000000489	-	89	79.487	Taeniopygia_guttata
ENSTTRG00000013588	SAFB	89	64.516	ENSTGUG00000000502	-	89	86.111	Taeniopygia_guttata
ENSTTRG00000013588	SAFB	68	60.784	ENSTRUG00000003567	safb	77	75.000	Takifugu_rubripes
ENSTTRG00000013588	SAFB	77	77.143	ENSTNIG00000015470	safb	87	77.143	Tetraodon_nigroviridis
ENSTTRG00000013588	SAFB	59	96.825	ENSTBEG00000013124	-	58	96.825	Tupaia_belangeri
ENSTTRG00000013588	SAFB	78	91.448	ENSUAMG00000024543	SAFB	94	90.287	Ursus_americanus
ENSTTRG00000013588	SAFB	80	100.000	ENSUMAG00000009734	SAFB	88	100.000	Ursus_maritimus
ENSTTRG00000013588	SAFB	64	94.690	ENSVPAG00000012043	SAFB	71	92.262	Vicugna_pacos
ENSTTRG00000013588	SAFB	92	98.413	ENSVVUG00000013720	SAFB	80	98.413	Vulpes_vulpes
ENSTTRG00000013588	SAFB	57	58.929	ENSXETG00000008755	safb	86	74.286	Xenopus_tropicalis
ENSTTRG00000013588	SAFB	65	69.444	ENSXMAG00000003458	safb	68	69.444	Xiphophorus_maculatus