EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000014015 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 5306 bases
Position: chrscaffold_105250:334-5639
Accession: 604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000013291	APOBEC_N	PF08210.11	3.6e-29	1	1
ENSTTRP00000013291	APOBEC_C	PF05240.14	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000014015	APOBEC1-201	561	-	ENSTTRP00000013291	187 (aa)	-	UPI00018B4FCD

Gene Model

Click here to download ENSTTRG00000014015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000014015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000014015	APOBEC1	100	75.401	ENSG00000111701	APOBEC1	79	75.401	Homo_sapiens
ENSTTRG00000014015	APOBEC1	97	74.176	ENSAMEG00000007098	APOBEC1	77	74.176	Ailuropoda_melanoleuca
ENSTTRG00000014015	APOBEC1	98	38.378	ENSACAG00000028578	-	98	38.378	Anolis_carolinensis
ENSTTRG00000014015	APOBEC1	100	77.005	ENSANAG00000027743	APOBEC1	75	77.005	Aotus_nancymaae
ENSTTRG00000014015	APOBEC1	100	76.471	ENSBTAG00000014683	APOBEC1	79	76.471	Bos_taurus
ENSTTRG00000014015	APOBEC1	92	77.326	ENSCJAG00000005398	APOBEC1	78	77.326	Callithrix_jacchus
ENSTTRG00000014015	APOBEC1	100	75.936	ENSCAFG00000013901	APOBEC1	79	75.936	Canis_familiaris
ENSTTRG00000014015	APOBEC1	95	73.446	ENSCAFG00020003511	APOBEC1	74	73.446	Canis_lupus_dingo
ENSTTRG00000014015	APOBEC1	97	77.348	ENSCHIG00000011898	APOBEC1	75	77.348	Capra_hircus
ENSTTRG00000014015	APOBEC1	74	76.812	ENSTSYG00000029141	APOBEC1	98	76.812	Carlito_syrichta
ENSTTRG00000014015	APOBEC1	92	65.116	ENSCAPG00000015882	-	80	65.116	Cavia_aperea
ENSTTRG00000014015	APOBEC1	100	64.706	ENSCPOG00000033068	APOBEC1	79	64.706	Cavia_porcellus
ENSTTRG00000014015	APOBEC1	100	78.610	ENSCCAG00000022258	APOBEC1	79	78.610	Cebus_capucinus
ENSTTRG00000014015	APOBEC1	100	76.471	ENSCATG00000021613	APOBEC1	75	76.471	Cercocebus_atys
ENSTTRG00000014015	APOBEC1	100	66.310	ENSCLAG00000014645	APOBEC1	81	66.310	Chinchilla_lanigera
ENSTTRG00000014015	APOBEC1	75	78.014	ENSCSAG00000009817	APOBEC1	74	78.014	Chlorocebus_sabaeus
ENSTTRG00000014015	APOBEC1	96	43.094	ENSCPBG00000014327	-	68	43.094	Chrysemys_picta_bellii
ENSTTRG00000014015	APOBEC1	88	45.783	ENSCPBG00000014328	-	73	45.783	Chrysemys_picta_bellii
ENSTTRG00000014015	APOBEC1	97	46.739	ENSCPBG00000014331	-	76	46.739	Chrysemys_picta_bellii
ENSTTRG00000014015	APOBEC1	99	47.594	ENSCPBG00000014335	-	76	47.594	Chrysemys_picta_bellii
ENSTTRG00000014015	APOBEC1	97	43.850	ENSCPBG00000017398	-	82	43.850	Chrysemys_picta_bellii
ENSTTRG00000014015	APOBEC1	97	77.901	ENSCANG00000038359	APOBEC1	79	77.901	Colobus_angolensis_palliatus
ENSTTRG00000014015	APOBEC1	100	66.845	ENSCGRG00001011130	Apobec1	82	66.845	Cricetulus_griseus_chok1gshd
ENSTTRG00000014015	APOBEC1	100	66.845	ENSCGRG00000008644	Apobec1	82	66.845	Cricetulus_griseus_crigri
ENSTTRG00000014015	APOBEC1	100	77.005	ENSDNOG00000010926	APOBEC1	79	77.005	Dasypus_novemcinctus
ENSTTRG00000014015	APOBEC1	91	65.116	ENSDORG00000023717	Apobec1	80	65.116	Dipodomys_ordii
ENSTTRG00000014015	APOBEC1	100	74.468	ENSETEG00000004867	APOBEC1	80	74.468	Echinops_telfairi
ENSTTRG00000014015	APOBEC1	97	79.121	ENSEASG00005015951	APOBEC1	76	79.121	Equus_asinus_asinus
ENSTTRG00000014015	APOBEC1	75	79.433	ENSECAG00000017163	APOBEC1	74	79.433	Equus_caballus
ENSTTRG00000014015	APOBEC1	71	62.121	ENSEEUG00000007530	-	63	62.121	Erinaceus_europaeus
ENSTTRG00000014015	APOBEC1	93	64.162	ENSEEUG00000009112	-	77	64.162	Erinaceus_europaeus
ENSTTRG00000014015	APOBEC1	100	76.471	ENSFCAG00000009350	APOBEC1	79	76.471	Felis_catus
ENSTTRG00000014015	APOBEC1	75	46.479	ENSFALG00000007257	-	70	46.479	Ficedula_albicollis
ENSTTRG00000014015	APOBEC1	85	52.201	ENSFDAG00000018470	APOBEC1	76	52.201	Fukomys_damarensis
ENSTTRG00000014015	APOBEC1	96	39.891	ENSGAGG00000021745	-	68	39.891	Gopherus_agassizii
ENSTTRG00000014015	APOBEC1	91	43.275	ENSGAGG00000006624	-	62	43.275	Gopherus_agassizii
ENSTTRG00000014015	APOBEC1	99	48.663	ENSGAGG00000011837	-	86	52.500	Gopherus_agassizii
ENSTTRG00000014015	APOBEC1	97	41.530	ENSGAGG00000021744	-	70	41.530	Gopherus_agassizii
ENSTTRG00000014015	APOBEC1	86	48.765	ENSGAGG00000004947	-	75	54.701	Gopherus_agassizii
ENSTTRG00000014015	APOBEC1	100	59.893	ENSHGLG00000001495	APOBEC1	79	59.893	Heterocephalus_glaber_female
ENSTTRG00000014015	APOBEC1	100	58.289	ENSHGLG00100002187	APOBEC1	79	58.289	Heterocephalus_glaber_male
ENSTTRG00000014015	APOBEC1	86	59.763	ENSSTOG00000021971	APOBEC1	100	71.429	Ictidomys_tridecemlineatus
ENSTTRG00000014015	APOBEC1	100	73.262	ENSJJAG00000022108	Apobec1	82	73.262	Jaculus_jaculus
ENSTTRG00000014015	APOBEC1	93	72.414	ENSLAFG00000030837	APOBEC1	78	72.414	Loxodonta_africana
ENSTTRG00000014015	APOBEC1	100	76.471	ENSMFAG00000000277	APOBEC1	79	76.471	Macaca_fascicularis
ENSTTRG00000014015	APOBEC1	100	76.471	ENSMNEG00000029670	APOBEC1	79	76.471	Macaca_nemestrina
ENSTTRG00000014015	APOBEC1	100	76.471	ENSMLEG00000036301	APOBEC1	79	76.471	Mandrillus_leucophaeus
ENSTTRG00000014015	APOBEC1	93	66.667	ENSMAUG00000022167	Apobec1	78	66.667	Mesocricetus_auratus
ENSTTRG00000014015	APOBEC1	100	72.193	ENSMICG00000043645	APOBEC1	79	72.193	Microcebus_murinus
ENSTTRG00000014015	APOBEC1	60	67.257	ENSMOCG00000016170	-	100	67.257	Microtus_ochrogaster
ENSTTRG00000014015	APOBEC1	100	64.706	ENSMODG00000018004	APOBEC1	79	64.706	Monodelphis_domestica
ENSTTRG00000014015	APOBEC1	100	66.845	ENSMUSG00000040613	Apobec1	100	63.717	Mus_musculus
ENSTTRG00000014015	APOBEC1	100	65.775	MGP_PahariEiJ_G0022580	-	100	61.983	Mus_pahari
ENSTTRG00000014015	APOBEC1	100	66.845	MGP_SPRETEiJ_G0029857	Apobec1	100	63.717	Mus_spretus
ENSTTRG00000014015	APOBEC1	100	73.797	ENSMPUG00000017532	APOBEC1	79	73.797	Mustela_putorius_furo
ENSTTRG00000014015	APOBEC1	100	70.053	ENSNGAG00000022607	Apobec1	82	70.053	Nannospalax_galili
ENSTTRG00000014015	APOBEC1	100	76.471	ENSNLEG00000005342	APOBEC1	79	76.471	Nomascus_leucogenys
ENSTTRG00000014015	APOBEC1	100	63.102	ENSMEUG00000013406	APOBEC1	79	63.102	Notamacropus_eugenii
ENSTTRG00000014015	APOBEC1	97	62.431	ENSOPRG00000009508	-	100	62.431	Ochotona_princeps
ENSTTRG00000014015	APOBEC1	52	66.327	ENSODEG00000001157	-	100	66.327	Octodon_degus
ENSTTRG00000014015	APOBEC1	100	71.658	ENSOCUG00000025736	APOBEC1	70	71.658	Oryctolagus_cuniculus
ENSTTRG00000014015	APOBEC1	97	72.527	ENSOGAG00000026415	APOBEC1	77	72.527	Otolemur_garnettii
ENSTTRG00000014015	APOBEC1	99	77.957	ENSOARG00000002072	APOBEC1	78	77.957	Ovis_aries
ENSTTRG00000014015	APOBEC1	97	69.780	ENSPPAG00000027657	APOBEC1	75	69.780	Pan_paniscus
ENSTTRG00000014015	APOBEC1	100	76.471	ENSPPRG00000012182	APOBEC1	79	76.471	Panthera_pardus
ENSTTRG00000014015	APOBEC1	100	76.471	ENSPTIG00000020280	APOBEC1	79	76.471	Panthera_tigris_altaica
ENSTTRG00000014015	APOBEC1	100	75.936	ENSPTRG00000004614	APOBEC1	79	75.936	Pan_troglodytes
ENSTTRG00000014015	APOBEC1	100	76.471	ENSPANG00000021027	APOBEC1	79	76.471	Papio_anubis
ENSTTRG00000014015	APOBEC1	67	49.485	ENSPSIG00000012791	-	66	49.485	Pelodiscus_sinensis
ENSTTRG00000014015	APOBEC1	98	42.162	ENSPSIG00000012568	-	80	42.162	Pelodiscus_sinensis
ENSTTRG00000014015	APOBEC1	100	68.984	ENSPEMG00000023841	Apobec1	82	68.984	Peromyscus_maniculatus_bairdii
ENSTTRG00000014015	APOBEC1	100	66.310	ENSPCIG00000023973	APOBEC1	79	66.310	Phascolarctos_cinereus
ENSTTRG00000014015	APOBEC1	100	77.005	ENSPPYG00000004228	APOBEC1	75	77.005	Pongo_abelii
ENSTTRG00000014015	APOBEC1	100	72.727	ENSPCAG00000008733	APOBEC1	100	72.727	Procavia_capensis
ENSTTRG00000014015	APOBEC1	93	73.988	ENSPCOG00000013957	APOBEC1	77	73.988	Propithecus_coquereli
ENSTTRG00000014015	APOBEC1	77	79.167	ENSPVAG00000010709	APOBEC1	62	79.167	Pteropus_vampyrus
ENSTTRG00000014015	APOBEC1	100	67.914	ENSRNOG00000015411	Apobec1	82	67.914	Rattus_norvegicus
ENSTTRG00000014015	APOBEC1	100	74.866	ENSRBIG00000031161	APOBEC1	79	74.866	Rhinopithecus_bieti
ENSTTRG00000014015	APOBEC1	100	74.866	ENSRROG00000033576	APOBEC1	79	74.866	Rhinopithecus_roxellana
ENSTTRG00000014015	APOBEC1	93	78.613	ENSSBOG00000030587	APOBEC1	98	78.613	Saimiri_boliviensis_boliviensis
ENSTTRG00000014015	APOBEC1	95	65.169	ENSSHAG00000008925	APOBEC1	78	65.169	Sarcophilus_harrisii
ENSTTRG00000014015	APOBEC1	92	63.372	ENSSARG00000000032	-	100	63.372	Sorex_araneus
ENSTTRG00000014015	APOBEC1	69	66.667	ENSSARG00000011972	-	98	66.667	Sorex_araneus
ENSTTRG00000014015	APOBEC1	76	46.207	ENSSPUG00000009044	-	56	46.207	Sphenodon_punctatus
ENSTTRG00000014015	APOBEC1	100	81.283	ENSSSCG00000000668	APOBEC1	79	81.283	Sus_scrofa
ENSTTRG00000014015	APOBEC1	78	47.945	ENSTGUG00000013118	-	100	47.945	Taeniopygia_guttata
ENSTTRG00000014015	APOBEC1	92	69.186	ENSTBEG00000010043	APOBEC1	73	69.186	Tupaia_belangeri
ENSTTRG00000014015	APOBEC1	97	74.176	ENSUAMG00000011636	APOBEC1	75	74.176	Ursus_americanus
ENSTTRG00000014015	APOBEC1	97	74.176	ENSUMAG00000016552	APOBEC1	75	74.176	Ursus_maritimus
ENSTTRG00000014015	APOBEC1	100	77.540	ENSVPAG00000001343	APOBEC1	79	77.540	Vicugna_pacos
ENSTTRG00000014015	APOBEC1	100	76.471	ENSVVUG00000010522	APOBEC1	79	76.471	Vulpes_vulpes