EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000014128 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 15244 bases
Position: chrGeneScaffold_3472:223601-238844
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000013400	tRNA-synt_1g	PF09334.11	1.1e-10	1	1
ENSTTRP00000013400	Anticodon_1	PF08264.13	5.9e-33	1	1
ENSTTRP00000013400	tRNA-synt_1	PF00133.22	2.3e-178	1	2
ENSTTRP00000013400	tRNA-synt_1	PF00133.22	2.3e-178	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000014129	VARS-201	3792	-	ENSTTRP00000013400	1263 (aa)	-	UPI00018B72A1

Gene Model

Click here to download ENSTTRG00000014128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000014128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000014128	VARS	61	71.774	ENSTTRG00000012243	VARS2	73	71.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000014128	VARS	100	86.155	ENSG00000204394	VARS	100	96.552	Homo_sapiens
ENSTTRG00000014128	VARS	98	60.032	ENSAPOG00000020921	vars	99	60.032	Acanthochromis_polyacanthus
ENSTTRG00000014128	VARS	98	60.032	ENSAPOG00000020691	vars	99	60.032	Acanthochromis_polyacanthus
ENSTTRG00000014128	VARS	100	86.640	ENSAMEG00000006417	VARS	100	86.640	Ailuropoda_melanoleuca
ENSTTRG00000014128	VARS	100	59.481	ENSACIG00000013752	vars	100	59.481	Amphilophus_citrinellus
ENSTTRG00000014128	VARS	100	59.638	ENSAOCG00000002447	vars	100	59.638	Amphiprion_ocellaris
ENSTTRG00000014128	VARS	100	58.924	ENSAPEG00000010638	vars	99	58.924	Amphiprion_percula
ENSTTRG00000014128	VARS	100	59.037	ENSATEG00000020219	vars	100	59.432	Anabas_testudineus
ENSTTRG00000014128	VARS	90	63.628	ENSACAG00000029133	-	99	63.833	Anolis_carolinensis
ENSTTRG00000014128	VARS	100	86.472	ENSANAG00000015453	VARS	100	86.472	Aotus_nancymaae
ENSTTRG00000014128	VARS	100	58.929	ENSACLG00000025699	vars	97	58.929	Astatotilapia_calliptera
ENSTTRG00000014128	VARS	94	60.801	ENSAMXG00000017716	vars	95	60.801	Astyanax_mexicanus
ENSTTRG00000014128	VARS	100	88.291	ENSBTAG00000005631	VARS	100	88.291	Bos_taurus
ENSTTRG00000014128	VARS	100	86.313	ENSCJAG00000002604	VARS	100	86.313	Callithrix_jacchus
ENSTTRG00000014128	VARS	100	86.472	ENSCAFG00000000636	VARS	100	86.472	Canis_familiaris
ENSTTRG00000014128	VARS	94	86.064	ENSCAFG00020020790	VARS	96	86.064	Canis_lupus_dingo
ENSTTRG00000014128	VARS	100	88.212	ENSCHIG00000011008	VARS	96	92.920	Capra_hircus
ENSTTRG00000014128	VARS	100	86.472	ENSTSYG00000001567	VARS	100	86.472	Carlito_syrichta
ENSTTRG00000014128	VARS	91	82.266	ENSCAPG00000013736	VARS	92	91.995	Cavia_aperea
ENSTTRG00000014128	VARS	93	92.206	ENSCPOG00000000870	VARS	95	92.206	Cavia_porcellus
ENSTTRG00000014128	VARS	100	86.392	ENSCCAG00000035656	VARS	100	94.279	Cebus_capucinus
ENSTTRG00000014128	VARS	100	86.076	ENSCATG00000022394	VARS	100	91.400	Cercocebus_atys
ENSTTRG00000014128	VARS	88	81.102	ENSCLAG00000009470	VARS	91	81.167	Chinchilla_lanigera
ENSTTRG00000014128	VARS	100	86.155	ENSCSAG00000008784	VARS	100	86.155	Chlorocebus_sabaeus
ENSTTRG00000014128	VARS	77	69.065	ENSCPBG00000007943	VARS	96	69.065	Chrysemys_picta_bellii
ENSTTRG00000014128	VARS	100	86.234	ENSCANG00000033570	VARS	100	86.234	Colobus_angolensis_palliatus
ENSTTRG00000014128	VARS	100	84.335	ENSCGRG00001005686	Vars	100	84.335	Cricetulus_griseus_chok1gshd
ENSTTRG00000014128	VARS	92	78.392	ENSCGRG00000013352	Vars	78	78.392	Cricetulus_griseus_crigri
ENSTTRG00000014128	VARS	100	58.340	ENSCSEG00000019652	vars	100	58.340	Cynoglossus_semilaevis
ENSTTRG00000014128	VARS	100	59.642	ENSCVAG00000022398	vars	100	59.642	Cyprinodon_variegatus
ENSTTRG00000014128	VARS	100	58.366	ENSDARG00000044575	vars	100	58.521	Danio_rerio
ENSTTRG00000014128	VARS	84	82.408	ENSDORG00000016433	Vars	95	82.408	Dipodomys_ordii
ENSTTRG00000014128	VARS	65	90.090	ENSETEG00000003824	VARS	72	90.099	Echinops_telfairi
ENSTTRG00000014128	VARS	57	62.637	ENSEBUG00000004637	vars	100	62.912	Eptatretus_burgeri
ENSTTRG00000014128	VARS	50	71.506	ENSEBUG00000007086	vars	84	70.681	Eptatretus_burgeri
ENSTTRG00000014128	VARS	100	87.658	ENSEASG00005015673	VARS	100	87.658	Equus_asinus_asinus
ENSTTRG00000014128	VARS	100	87.431	ENSECAG00000014620	VARS	100	87.510	Equus_caballus
ENSTTRG00000014128	VARS	79	90.657	ENSEEUG00000004116	VARS	76	90.657	Erinaceus_europaeus
ENSTTRG00000014128	VARS	100	58.437	ENSELUG00000006550	vars	97	58.901	Esox_lucius
ENSTTRG00000014128	VARS	100	86.788	ENSFCAG00000004510	VARS	100	86.788	Felis_catus
ENSTTRG00000014128	VARS	82	81.546	ENSFDAG00000011401	VARS	100	81.546	Fukomys_damarensis
ENSTTRG00000014128	VARS	100	59.826	ENSFHEG00000010672	vars	100	59.826	Fundulus_heteroclitus
ENSTTRG00000014128	VARS	87	66.496	ENSGMOG00000014908	vars	97	60.117	Gadus_morhua
ENSTTRG00000014128	VARS	100	60.125	ENSGAFG00000021630	vars	100	60.125	Gambusia_affinis
ENSTTRG00000014128	VARS	92	59.765	ENSGACG00000009601	vars	98	59.450	Gasterosteus_aculeatus
ENSTTRG00000014128	VARS	100	86.076	ENSGGOG00000011364	VARS	100	86.076	Gorilla_gorilla
ENSTTRG00000014128	VARS	100	58.929	ENSHBUG00000017151	vars	97	58.929	Haplochromis_burtoni
ENSTTRG00000014128	VARS	100	83.228	ENSHGLG00000011646	VARS	100	83.228	Heterocephalus_glaber_female
ENSTTRG00000014128	VARS	93	76.412	ENSHGLG00100018062	VARS	100	76.412	Heterocephalus_glaber_male
ENSTTRG00000014128	VARS	95	67.248	ENSHCOG00000012198	vars	99	59.274	Hippocampus_comes
ENSTTRG00000014128	VARS	100	59.685	ENSIPUG00000005218	vars	100	59.685	Ictalurus_punctatus
ENSTTRG00000014128	VARS	100	85.613	ENSSTOG00000013112	VARS	100	85.613	Ictidomys_tridecemlineatus
ENSTTRG00000014128	VARS	100	83.623	ENSJJAG00000019749	-	100	83.703	Jaculus_jaculus
ENSTTRG00000014128	VARS	100	65.269	ENSJJAG00000015343	-	100	67.866	Jaculus_jaculus
ENSTTRG00000014128	VARS	100	59.321	ENSKMAG00000009455	vars	100	59.242	Kryptolebias_marmoratus
ENSTTRG00000014128	VARS	94	66.803	ENSLBEG00000010341	vars	100	59.130	Labrus_bergylta
ENSTTRG00000014128	VARS	89	62.252	ENSLACG00000015232	VARS	99	55.300	Latimeria_chalumnae
ENSTTRG00000014128	VARS	100	60.360	ENSLOCG00000004240	vars	100	60.360	Lepisosteus_oculatus
ENSTTRG00000014128	VARS	100	85.839	ENSLAFG00000023090	VARS	100	85.918	Loxodonta_africana
ENSTTRG00000014128	VARS	100	86.155	ENSMFAG00000001032	VARS	100	86.155	Macaca_fascicularis
ENSTTRG00000014128	VARS	100	86.155	ENSMMUG00000006828	VARS	100	86.155	Macaca_mulatta
ENSTTRG00000014128	VARS	100	86.155	ENSMNEG00000042072	VARS	100	86.155	Macaca_nemestrina
ENSTTRG00000014128	VARS	100	85.918	ENSMLEG00000039307	VARS	100	85.918	Mandrillus_leucophaeus
ENSTTRG00000014128	VARS	100	59.023	ENSMAMG00000003949	vars	100	59.023	Mastacembelus_armatus
ENSTTRG00000014128	VARS	100	59.669	ENSMZEG00005018327	vars	100	59.669	Maylandia_zebra
ENSTTRG00000014128	VARS	100	84.098	ENSMAUG00000006715	Vars	100	84.098	Mesocricetus_auratus
ENSTTRG00000014128	VARS	100	85.680	ENSMICG00000003548	VARS	100	93.284	Microcebus_murinus
ENSTTRG00000014128	VARS	100	82.120	ENSMOCG00000015404	Vars	100	82.120	Microtus_ochrogaster
ENSTTRG00000014128	VARS	100	59.591	ENSMMOG00000015801	vars	100	59.591	Mola_mola
ENSTTRG00000014128	VARS	100	79.035	ENSMODG00000015204	-	100	79.035	Monodelphis_domestica
ENSTTRG00000014128	VARS	99	59.417	ENSMALG00000022532	vars	99	59.338	Monopterus_albus
ENSTTRG00000014128	VARS	100	85.206	MGP_CAROLIEiJ_G0021491	Vars	100	85.285	Mus_caroli
ENSTTRG00000014128	VARS	100	85.047	ENSMUSG00000007029	Vars	100	85.127	Mus_musculus
ENSTTRG00000014128	VARS	100	84.652	MGP_PahariEiJ_G0020486	Vars	100	84.731	Mus_pahari
ENSTTRG00000014128	VARS	100	85.127	MGP_SPRETEiJ_G0022396	Vars	100	85.206	Mus_spretus
ENSTTRG00000014128	VARS	100	86.788	ENSMPUG00000010821	VARS	100	86.788	Mustela_putorius_furo
ENSTTRG00000014128	VARS	78	83.502	ENSMLUG00000013126	VARS	100	83.603	Myotis_lucifugus
ENSTTRG00000014128	VARS	100	84.098	ENSNGAG00000012151	Vars	100	84.098	Nannospalax_galili
ENSTTRG00000014128	VARS	100	59.355	ENSNBRG00000020520	vars	100	59.355	Neolamprologus_brichardi
ENSTTRG00000014128	VARS	100	85.680	ENSNLEG00000006351	VARS	100	89.078	Nomascus_leucogenys
ENSTTRG00000014128	VARS	94	82.192	ENSMEUG00000011378	VARS	94	82.192	Notamacropus_eugenii
ENSTTRG00000014128	VARS	100	85.047	ENSOPRG00000003607	VARS	100	85.047	Ochotona_princeps
ENSTTRG00000014128	VARS	100	83.465	ENSODEG00000017681	VARS	100	83.465	Octodon_degus
ENSTTRG00000014128	VARS	100	59.358	ENSONIG00000013064	vars	99	61.451	Oreochromis_niloticus
ENSTTRG00000014128	VARS	77	72.662	ENSOANG00000005400	VARS	98	72.662	Ornithorhynchus_anatinus
ENSTTRG00000014128	VARS	94	93.213	ENSOCUG00000022463	VARS	95	93.213	Oryctolagus_cuniculus
ENSTTRG00000014128	VARS	100	59.168	ENSORLG00000013063	vars	100	59.154	Oryzias_latipes
ENSTTRG00000014128	VARS	100	59.598	ENSORLG00020003504	vars	100	59.675	Oryzias_latipes_hni
ENSTTRG00000014128	VARS	100	59.644	ENSORLG00015009001	vars	100	59.644	Oryzias_latipes_hsok
ENSTTRG00000014128	VARS	100	59.161	ENSOMEG00000015016	vars	100	59.084	Oryzias_melastigma
ENSTTRG00000014128	VARS	100	85.601	ENSOGAG00000007515	VARS	100	85.601	Otolemur_garnettii
ENSTTRG00000014128	VARS	100	86.234	ENSPPAG00000034012	VARS	100	86.234	Pan_paniscus
ENSTTRG00000014128	VARS	100	86.867	ENSPPRG00000014855	VARS	100	86.867	Panthera_pardus
ENSTTRG00000014128	VARS	85	85.781	ENSPTIG00000010462	VARS	95	85.897	Panthera_tigris_altaica
ENSTTRG00000014128	VARS	100	86.155	ENSPTRG00000017985	VARS	100	86.155	Pan_troglodytes
ENSTTRG00000014128	VARS	95	92.500	ENSPANG00000014565	VARS	95	92.500	Papio_anubis
ENSTTRG00000014128	VARS	95	66.599	ENSPKIG00000016304	vars	100	58.069	Paramormyrops_kingsleyae
ENSTTRG00000014128	VARS	100	59.700	ENSPMGG00000023909	vars	100	59.700	Periophthalmus_magnuspinnatus
ENSTTRG00000014128	VARS	100	85.285	ENSPEMG00000006639	Vars	100	85.285	Peromyscus_maniculatus_bairdii
ENSTTRG00000014128	VARS	100	78.402	ENSPCIG00000018553	VARS	100	78.402	Phascolarctos_cinereus
ENSTTRG00000014128	VARS	100	60.280	ENSPFOG00000015690	vars	100	60.280	Poecilia_formosa
ENSTTRG00000014128	VARS	100	60.358	ENSPLAG00000009590	vars	100	60.358	Poecilia_latipinna
ENSTTRG00000014128	VARS	100	60.280	ENSPMEG00000004708	vars	100	60.280	Poecilia_mexicana
ENSTTRG00000014128	VARS	94	67.996	ENSPREG00000013264	vars	97	67.996	Poecilia_reticulata
ENSTTRG00000014128	VARS	100	84.494	ENSPPYG00000016460	VARS	100	84.494	Pongo_abelii
ENSTTRG00000014128	VARS	86	91.562	ENSPCAG00000013565	VARS	86	91.562	Procavia_capensis
ENSTTRG00000014128	VARS	100	86.719	ENSPCOG00000010942	VARS	100	86.798	Propithecus_coquereli
ENSTTRG00000014128	VARS	100	82.991	ENSPVAG00000012403	VARS	100	82.991	Pteropus_vampyrus
ENSTTRG00000014128	VARS	100	58.929	ENSPNYG00000022511	vars	100	58.929	Pundamilia_nyererei
ENSTTRG00000014128	VARS	100	59.193	ENSPNAG00000020962	vars	100	58.960	Pygocentrus_nattereri
ENSTTRG00000014128	VARS	100	85.047	ENSRNOG00000000867	Vars	100	85.047	Rattus_norvegicus
ENSTTRG00000014128	VARS	100	86.234	ENSRBIG00000041669	VARS	100	91.400	Rhinopithecus_bieti
ENSTTRG00000014128	VARS	100	86.234	ENSRROG00000045490	VARS	100	86.234	Rhinopithecus_roxellana
ENSTTRG00000014128	VARS	100	86.155	ENSSBOG00000035402	VARS	100	86.155	Saimiri_boliviensis_boliviensis
ENSTTRG00000014128	VARS	100	73.763	ENSSHAG00000006937	VARS	100	73.998	Sarcophilus_harrisii
ENSTTRG00000014128	VARS	94	67.211	ENSSFOG00015014272	vars	97	67.211	Scleropages_formosus
ENSTTRG00000014128	VARS	100	57.609	ENSSMAG00000009596	vars	99	57.686	Scophthalmus_maximus
ENSTTRG00000014128	VARS	100	58.463	ENSSDUG00000014177	vars	100	58.463	Seriola_dumerili
ENSTTRG00000014128	VARS	100	58.463	ENSSLDG00000025316	vars	100	58.540	Seriola_lalandi_dorsalis
ENSTTRG00000014128	VARS	100	59.716	ENSSPAG00000017068	vars	100	59.716	Stegastes_partitus
ENSTTRG00000014128	VARS	100	87.115	ENSSSCG00000038950	VARS	100	87.194	Sus_scrofa
ENSTTRG00000014128	VARS	82	58.142	ENSTRUG00000012307	vars	98	58.302	Takifugu_rubripes
ENSTTRG00000014128	VARS	100	59.169	ENSTNIG00000008011	vars	100	59.169	Tetraodon_nigroviridis
ENSTTRG00000014128	VARS	54	96.255	ENSTBEG00000004728	-	60	96.255	Tupaia_belangeri
ENSTTRG00000014128	VARS	100	82.940	ENSUAMG00000010424	VARS	100	82.940	Ursus_americanus
ENSTTRG00000014128	VARS	93	87.386	ENSUMAG00000013486	VARS	98	87.386	Ursus_maritimus
ENSTTRG00000014128	VARS	96	93.750	ENSVVUG00000021323	VARS	100	86.234	Vulpes_vulpes
ENSTTRG00000014128	VARS	92	61.687	ENSXETG00000024076	vars	98	55.923	Xenopus_tropicalis
ENSTTRG00000014128	VARS	100	59.732	ENSXCOG00000019172	vars	100	59.732	Xiphophorus_couchianus
ENSTTRG00000014128	VARS	100	59.891	ENSXMAG00000010927	vars	100	59.891	Xiphophorus_maculatus