EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000014273 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 20019 bases
Position: chrGeneScaffold_2226:36862-56880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000013530	RNA_pol_Rpb1_5	PF04998.17	4.2e-99	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	1	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	2	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	3	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	4	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	5	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	6	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	7	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	8	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	9	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	10	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	11	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	12	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	13	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	14	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	15	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	16	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	17	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	18	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	19	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	20	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	21	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	22	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	23	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	24	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	25	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	26	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	27	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	28	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	29	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	30	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	31	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	32	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	33	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	34	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	35	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	36	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	37	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	38	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	39	40
ENSTTRP00000013530	RNA_pol_Rpb1_R	PF05001.13	2e-27	40	40
ENSTTRP00000013530	RNA_pol_Rpb1_4	PF05000.17	2.7e-38	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_2	PF00623.20	9.9e-74	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_3	PF04983.18	1.4e-40	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_1	PF04997.12	8.1e-107	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_7	PF04990.12	1.4e-54	1	1
ENSTTRP00000013530	RNA_pol_Rpb1_6	PF04992.14	4e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000014274	-	5880	-	ENSTTRP00000013530	1959 (aa)	-	UPI00018B539C

Gene Model

Click here to download ENSTTRG00000014273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000014273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000014273	-	50	54.930	ENSTTRG00000008597	POLR1A	76	54.930
ENSTTRG00000014273	-	66	36.455	ENSTTRG00000007817	POLR3A	91	36.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000014273	-	82	92.808	ENSAPOG00000006552	polr2a	91	92.800	Acanthochromis_polyacanthus
ENSTTRG00000014273	-	100	98.125	ENSAMEG00000016265	-	100	98.125	Ailuropoda_melanoleuca
ENSTTRG00000014273	-	82	90.825	ENSACIG00000015982	polr2a	81	90.813	Amphilophus_citrinellus
ENSTTRG00000014273	-	97	90.763	ENSAOCG00000004255	polr2a	96	90.751	Amphiprion_ocellaris
ENSTTRG00000014273	-	82	92.870	ENSAPEG00000012623	polr2a	82	92.862	Amphiprion_percula
ENSTTRG00000014273	-	82	92.746	ENSATEG00000019644	polr2a	82	92.737	Anabas_testudineus
ENSTTRG00000014273	-	100	96.954	ENSACAG00000014561	POLR2A	100	96.954	Anolis_carolinensis
ENSTTRG00000014273	-	100	98.426	ENSANAG00000020093	-	100	98.426	Aotus_nancymaae
ENSTTRG00000014273	-	82	92.560	ENSACLG00000006735	polr2a	82	92.551	Astatotilapia_calliptera
ENSTTRG00000014273	-	82	93.118	ENSAMXG00000020046	polr2a	82	93.110	Astyanax_mexicanus
ENSTTRG00000014273	-	100	98.376	ENSBTAG00000046765	POLR2A	100	98.376	Bos_taurus
ENSTTRG00000014273	-	94	69.186	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSTTRG00000014273	-	100	97.970	ENSCAFG00000016532	POLR2A	100	97.988	Canis_familiaris
ENSTTRG00000014273	-	100	97.760	ENSCAFG00020007929	-	100	97.760	Canis_lupus_dingo
ENSTTRG00000014273	-	100	98.376	ENSCHIG00000027173	-	100	98.376	Capra_hircus
ENSTTRG00000014273	-	100	95.939	ENSTSYG00000012803	-	100	96.447	Carlito_syrichta
ENSTTRG00000014273	-	98	93.885	ENSCAPG00000001882	-	98	96.580	Cavia_aperea
ENSTTRG00000014273	-	100	93.607	ENSCPOG00000014812	-	98	96.646	Cavia_porcellus
ENSTTRG00000014273	-	100	98.426	ENSCCAG00000020938	-	100	98.426	Cebus_capucinus
ENSTTRG00000014273	-	100	98.376	ENSCATG00000013680	-	100	98.376	Cercocebus_atys
ENSTTRG00000014273	-	100	98.274	ENSCLAG00000012196	-	100	98.274	Chinchilla_lanigera
ENSTTRG00000014273	-	82	88.834	ENSCSAG00000011644	-	82	88.896	Chlorocebus_sabaeus
ENSTTRG00000014273	-	100	92.487	ENSCPBG00000012697	POLR2A	100	92.487	Chrysemys_picta_bellii
ENSTTRG00000014273	-	99	75.091	ENSCING00000007884	-	99	75.325	Ciona_intestinalis
ENSTTRG00000014273	-	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSTTRG00000014273	-	100	97.716	ENSCANG00000010622	-	100	97.716	Colobus_angolensis_palliatus
ENSTTRG00000014273	-	82	91.580	ENSCGRG00001003538	Polr2a	84	90.055	Cricetulus_griseus_chok1gshd
ENSTTRG00000014273	-	82	94.233	ENSCGRG00000012105	Polr2a	95	94.172	Cricetulus_griseus_crigri
ENSTTRG00000014273	-	82	92.126	ENSCSEG00000002635	polr2a	82	92.117	Cynoglossus_semilaevis
ENSTTRG00000014273	-	82	92.994	ENSCVAG00000005156	polr2a	82	92.986	Cyprinodon_variegatus
ENSTTRG00000014273	-	82	92.813	ENSDARG00000099966	polr2a	82	92.804	Danio_rerio
ENSTTRG00000014273	-	100	95.431	ENSDNOG00000016482	-	100	95.431	Dasypus_novemcinctus
ENSTTRG00000014273	-	100	98.426	ENSDORG00000008667	Polr2a	100	98.426	Dipodomys_ordii
ENSTTRG00000014273	-	99	68.674	FBgn0003277	RpII215	99	73.267	Drosophila_melanogaster
ENSTTRG00000014273	-	94	92.846	ENSETEG00000002540	-	87	93.997	Echinops_telfairi
ENSTTRG00000014273	-	81	86.338	ENSEBUG00000013967	polr2a	82	85.750	Eptatretus_burgeri
ENSTTRG00000014273	-	82	95.965	ENSEASG00005019114	-	83	95.965	Equus_asinus_asinus
ENSTTRG00000014273	-	100	98.376	ENSECAG00000018485	POLR2A	100	98.376	Equus_caballus
ENSTTRG00000014273	-	87	97.730	ENSEEUG00000001154	-	95	97.730	Erinaceus_europaeus
ENSTTRG00000014273	-	89	88.478	ENSELUG00000014284	polr2a	84	89.143	Esox_lucius
ENSTTRG00000014273	-	100	98.376	ENSFDAG00000008287	-	100	98.376	Fukomys_damarensis
ENSTTRG00000014273	-	85	92.994	ENSFHEG00000001768	polr2a	98	92.986	Fundulus_heteroclitus
ENSTTRG00000014273	-	99	88.735	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSTTRG00000014273	-	98	94.366	ENSGAFG00000005389	polr2a	99	90.751	Gambusia_affinis
ENSTTRG00000014273	-	99	89.117	ENSGACG00000019366	polr2a	100	86.647	Gasterosteus_aculeatus
ENSTTRG00000014273	-	100	96.606	ENSGGOG00000014800	-	100	96.606	Gorilla_gorilla
ENSTTRG00000014273	-	85	92.560	ENSHBUG00000018937	polr2a	99	92.551	Haplochromis_burtoni
ENSTTRG00000014273	-	100	98.376	ENSHGLG00000012381	POLR2A	100	98.376	Heterocephalus_glaber_female
ENSTTRG00000014273	-	100	98.376	ENSHGLG00100014843	POLR2A	100	98.376	Heterocephalus_glaber_male
ENSTTRG00000014273	-	82	92.250	ENSHCOG00000011874	polr2a	82	92.241	Hippocampus_comes
ENSTTRG00000014273	-	82	92.498	ENSIPUG00000002613	Polr2a	82	92.489	Ictalurus_punctatus
ENSTTRG00000014273	-	100	98.426	ENSSTOG00000001304	-	100	98.426	Ictidomys_tridecemlineatus
ENSTTRG00000014273	-	100	98.325	ENSJJAG00000013049	Polr2a	100	98.325	Jaculus_jaculus
ENSTTRG00000014273	-	80	94.253	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSTTRG00000014273	-	82	92.498	ENSLBEG00000027652	polr2a	82	92.489	Labrus_bergylta
ENSTTRG00000014273	-	80	85.389	ENSLACG00000012071	POLR2A	81	85.443	Latimeria_chalumnae
ENSTTRG00000014273	-	91	93.203	ENSLOCG00000013863	polr2a	99	92.919	Lepisosteus_oculatus
ENSTTRG00000014273	-	100	98.376	ENSLAFG00000008626	-	100	98.376	Loxodonta_africana
ENSTTRG00000014273	-	50	95.403	ENSMFAG00000007042	-	99	95.403	Macaca_fascicularis
ENSTTRG00000014273	-	100	98.376	ENSMMUG00000023620	-	100	98.376	Macaca_mulatta
ENSTTRG00000014273	-	100	97.673	ENSMNEG00000040407	-	100	97.673	Macaca_nemestrina
ENSTTRG00000014273	-	82	92.174	ENSMLEG00000030263	-	99	95.403	Mandrillus_leucophaeus
ENSTTRG00000014273	-	82	92.622	ENSMAMG00000003351	polr2a	82	92.613	Mastacembelus_armatus
ENSTTRG00000014273	-	82	92.560	ENSMZEG00005021429	polr2a	82	92.551	Maylandia_zebra
ENSTTRG00000014273	-	50	97.044	ENSMAUG00000021055	-	99	97.044	Mesocricetus_auratus
ENSTTRG00000014273	-	100	98.325	ENSMICG00000013372	-	100	98.325	Microcebus_murinus
ENSTTRG00000014273	-	100	93.415	ENSMOCG00000018279	Polr2a	100	93.379	Microtus_ochrogaster
ENSTTRG00000014273	-	87	92.188	ENSMMOG00000012515	polr2a	95	92.179	Mola_mola
ENSTTRG00000014273	-	100	98.020	ENSMODG00000007009	-	100	98.020	Monodelphis_domestica
ENSTTRG00000014273	-	94	90.037	ENSMALG00000008716	polr2a	99	90.689	Monopterus_albus
ENSTTRG00000014273	-	100	98.376	MGP_CAROLIEiJ_G0016587	Polr2a	100	98.376	Mus_caroli
ENSTTRG00000014273	-	100	98.376	ENSMUSG00000005198	Polr2a	100	98.376	Mus_musculus
ENSTTRG00000014273	-	100	96.611	MGP_PahariEiJ_G0017718	Polr2a	100	96.611	Mus_pahari
ENSTTRG00000014273	-	100	98.376	MGP_SPRETEiJ_G0017423	Polr2a	100	98.376	Mus_spretus
ENSTTRG00000014273	-	100	98.325	ENSMPUG00000009648	-	100	98.325	Mustela_putorius_furo
ENSTTRG00000014273	-	100	98.022	ENSMLUG00000009088	-	100	98.022	Myotis_lucifugus
ENSTTRG00000014273	-	100	98.426	ENSNGAG00000002543	Polr2a	100	98.426	Nannospalax_galili
ENSTTRG00000014273	-	82	90.515	ENSNBRG00000002005	polr2a	81	90.503	Neolamprologus_brichardi
ENSTTRG00000014273	-	100	97.214	ENSNLEG00000009460	-	100	97.214	Nomascus_leucogenys
ENSTTRG00000014273	-	94	98.462	ENSMEUG00000008611	-	93	98.462	Notamacropus_eugenii
ENSTTRG00000014273	-	80	98.039	ENSOPRG00000015116	-	99	98.039	Ochotona_princeps
ENSTTRG00000014273	-	100	90.725	ENSODEG00000017674	-	100	93.604	Octodon_degus
ENSTTRG00000014273	-	82	92.746	ENSONIG00000009231	polr2a	82	92.737	Oreochromis_niloticus
ENSTTRG00000014273	-	100	95.840	ENSOCUG00000017929	-	100	95.993	Oryctolagus_cuniculus
ENSTTRG00000014273	-	82	92.622	ENSORLG00000006431	polr2a	82	92.613	Oryzias_latipes
ENSTTRG00000014273	-	82	92.622	ENSORLG00020010235	polr2a	82	92.613	Oryzias_latipes_hni
ENSTTRG00000014273	-	82	92.622	ENSORLG00015007075	polr2a	82	92.613	Oryzias_latipes_hsok
ENSTTRG00000014273	-	96	95.699	ENSOMEG00000010713	polr2a	100	92.728	Oryzias_melastigma
ENSTTRG00000014273	-	100	98.274	ENSOGAG00000033608	-	100	98.274	Otolemur_garnettii
ENSTTRG00000014273	-	98	98.148	ENSOARG00000013874	-	100	98.148	Ovis_aries
ENSTTRG00000014273	-	93	95.315	ENSPPAG00000043734	-	100	95.838	Pan_paniscus
ENSTTRG00000014273	-	100	97.214	ENSPTRG00000008691	POLR2A	100	97.214	Pan_troglodytes
ENSTTRG00000014273	-	100	97.716	ENSPANG00000024099	-	100	97.716	Papio_anubis
ENSTTRG00000014273	-	77	92.777	ENSPKIG00000005727	polr2a	85	90.812	Paramormyrops_kingsleyae
ENSTTRG00000014273	-	98	94.718	ENSPSIG00000014006	POLR2A	100	94.606	Pelodiscus_sinensis
ENSTTRG00000014273	-	100	92.523	ENSPMGG00000019734	polr2a	99	92.924	Periophthalmus_magnuspinnatus
ENSTTRG00000014273	-	100	98.426	ENSPEMG00000012521	Polr2a	100	98.426	Peromyscus_maniculatus_bairdii
ENSTTRG00000014273	-	96	85.737	ENSPCIG00000028851	-	96	85.737	Phascolarctos_cinereus
ENSTTRG00000014273	-	85	92.932	ENSPFOG00000007890	polr2a	99	92.924	Poecilia_formosa
ENSTTRG00000014273	-	85	92.932	ENSPLAG00000007399	polr2a	99	92.924	Poecilia_latipinna
ENSTTRG00000014273	-	85	92.932	ENSPMEG00000002071	polr2a	99	92.924	Poecilia_mexicana
ENSTTRG00000014273	-	82	92.870	ENSPREG00000013122	polr2a	82	92.862	Poecilia_reticulata
ENSTTRG00000014273	-	100	95.233	ENSPPYG00000007924	-	100	97.363	Pongo_abelii
ENSTTRG00000014273	-	92	99.428	ENSPCAG00000006951	-	92	99.428	Procavia_capensis
ENSTTRG00000014273	-	100	97.229	ENSPCOG00000025260	-	100	97.229	Propithecus_coquereli
ENSTTRG00000014273	-	100	98.374	ENSPVAG00000005069	-	100	98.374	Pteropus_vampyrus
ENSTTRG00000014273	-	82	92.622	ENSPNYG00000022340	polr2a	82	92.613	Pundamilia_nyererei
ENSTTRG00000014273	-	82	92.932	ENSPNAG00000011237	polr2a	82	92.924	Pygocentrus_nattereri
ENSTTRG00000014273	-	100	98.325	ENSRNOG00000028834	Polr2a	100	98.325	Rattus_norvegicus
ENSTTRG00000014273	-	82	97.641	ENSRBIG00000002471	-	100	94.975	Rhinopithecus_bieti
ENSTTRG00000014273	-	100	98.020	ENSRROG00000029583	-	100	98.020	Rhinopithecus_roxellana
ENSTTRG00000014273	-	83	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSTTRG00000014273	-	100	98.426	ENSSBOG00000000808	-	100	98.426	Saimiri_boliviensis_boliviensis
ENSTTRG00000014273	-	92	97.579	ENSSHAG00000002858	-	100	95.533	Sarcophilus_harrisii
ENSTTRG00000014273	-	82	92.870	ENSSFOG00015023275	polr2a	82	92.862	Scleropages_formosus
ENSTTRG00000014273	-	82	92.250	ENSSMAG00000009137	polr2a	82	92.241	Scophthalmus_maximus
ENSTTRG00000014273	-	82	92.746	ENSSDUG00000020466	polr2a	82	92.737	Seriola_dumerili
ENSTTRG00000014273	-	82	92.746	ENSSLDG00000020613	polr2a	82	92.737	Seriola_lalandi_dorsalis
ENSTTRG00000014273	-	97	93.182	ENSSARG00000005875	-	99	93.182	Sorex_araneus
ENSTTRG00000014273	-	100	92.808	ENSSPAG00000016741	polr2a	94	92.800	Stegastes_partitus
ENSTTRG00000014273	-	100	97.665	ENSSSCG00000028278	-	100	97.665	Sus_scrofa
ENSTTRG00000014273	-	99	87.213	ENSTRUG00000012320	polr2a	81	87.197	Takifugu_rubripes
ENSTTRG00000014273	-	99	91.321	ENSTNIG00000010136	polr2a	100	91.310	Tetraodon_nigroviridis
ENSTTRG00000014273	-	74	98.980	ENSTBEG00000013294	-	58	98.980	Tupaia_belangeri
ENSTTRG00000014273	-	96	94.985	ENSUAMG00000014866	-	100	97.647	Ursus_americanus
ENSTTRG00000014273	-	99	95.684	ENSUMAG00000015732	-	100	95.684	Ursus_maritimus
ENSTTRG00000014273	-	65	100.000	ENSVPAG00000008842	-	74	100.000	Vicugna_pacos
ENSTTRG00000014273	-	100	95.033	ENSVVUG00000027878	-	100	96.954	Vulpes_vulpes
ENSTTRG00000014273	-	99	95.534	ENSXETG00000012465	polr2a	100	95.534	Xenopus_tropicalis
ENSTTRG00000014273	-	89	92.105	ENSXCOG00000001804	polr2a	94	90.689	Xiphophorus_couchianus
ENSTTRG00000014273	-	82	92.870	ENSXMAG00000015687	polr2a	82	92.862	Xiphophorus_maculatus