EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000014340 (Gene tree)
Gene ID: -
Gene Symbol: PABPC4
Alias: APP-1|iPABP
Full Name: poly(A) binding protein cytoplasmic 4
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 18702 bases
Position: chrGeneScaffold_436:12267-30968
Accession: 8557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000013598	PABP	PF00658.18	8e-33	1	1
ENSTTRP00000013598	RRM_1	PF00076.22	1.2e-45	1	2
ENSTTRP00000013598	RRM_1	PF00076.22	1.2e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000014343	PABPC4-201	1668	-	ENSTTRP00000013598	555 (aa)	-	UPI00018B65F7

Gene Model

Click here to download ENSTTRG00000014340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000014340's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000014340	PABPC4	99	61.960	ENSTTRG00000004689	PABPC3	98	53.571
ENSTTRG00000014340	PABPC4	92	52.717	ENSTTRG00000007618	PABPC1L	89	51.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000014340	PABPC4	100	87.059	ENSG00000090621	PABPC4	99	100.000	Homo_sapiens
ENSTTRG00000014340	PABPC4	99	67.227	ENSAPOG00000001161	pabpc4	99	62.147	Acanthochromis_polyacanthus
ENSTTRG00000014340	PABPC4	100	87.395	ENSAMEG00000011535	-	99	83.716	Ailuropoda_melanoleuca
ENSTTRG00000014340	PABPC4	99	45.854	ENSAMEG00000015083	-	89	45.516	Ailuropoda_melanoleuca
ENSTTRG00000014340	PABPC4	100	68.377	ENSACIG00000023343	pabpc4	99	60.245	Amphilophus_citrinellus
ENSTTRG00000014340	PABPC4	78	88.889	ENSAOCG00000021529	pabpc4	90	86.111	Amphiprion_ocellaris
ENSTTRG00000014340	PABPC4	99	67.731	ENSAPEG00000019196	pabpc4	99	62.524	Amphiprion_percula
ENSTTRG00000014340	PABPC4	99	67.169	ENSATEG00000007402	pabpc4	99	61.842	Anabas_testudineus
ENSTTRG00000014340	PABPC4	99	76.263	ENSAPLG00000009729	-	99	67.736	Anas_platyrhynchos
ENSTTRG00000014340	PABPC4	99	74.490	ENSACAG00000002544	PABPC4	100	70.058	Anolis_carolinensis
ENSTTRG00000014340	PABPC4	100	87.059	ENSANAG00000025079	PABPC4	95	97.590	Aotus_nancymaae
ENSTTRG00000014340	PABPC4	100	67.550	ENSACLG00000019558	pabpc4	99	62.524	Astatotilapia_calliptera
ENSTTRG00000014340	PABPC4	99	66.491	ENSAMXG00000018779	pabpc4	98	67.972	Astyanax_mexicanus
ENSTTRG00000014340	PABPC4	100	83.557	ENSBTAG00000017125	PABPC4	99	79.541	Bos_taurus
ENSTTRG00000014340	PABPC4	62	83.150	ENSCJAG00000045953	-	92	83.088	Callithrix_jacchus
ENSTTRG00000014340	PABPC4	100	86.723	ENSCJAG00000002512	-	99	83.142	Callithrix_jacchus
ENSTTRG00000014340	PABPC4	100	87.395	ENSCAFG00000003081	PABPC4	99	78.352	Canis_familiaris
ENSTTRG00000014340	PABPC4	100	87.395	ENSCAFG00020004161	PABPC4	99	83.716	Canis_lupus_dingo
ENSTTRG00000014340	PABPC4	99	67.960	ENSCHIG00000023385	-	89	67.960	Capra_hircus
ENSTTRG00000014340	PABPC4	100	87.227	ENSCHIG00000019398	-	99	83.525	Capra_hircus
ENSTTRG00000014340	PABPC4	100	86.891	ENSTSYG00000006532	PABPC4	99	83.142	Carlito_syrichta
ENSTTRG00000014340	PABPC4	100	86.723	ENSCAPG00000015984	PABPC4	99	82.950	Cavia_aperea
ENSTTRG00000014340	PABPC4	100	86.723	ENSCPOG00000009552	PABPC4	99	82.950	Cavia_porcellus
ENSTTRG00000014340	PABPC4	100	86.891	ENSCCAG00000037306	PABPC4	99	83.333	Cebus_capucinus
ENSTTRG00000014340	PABPC4	100	87.059	ENSCATG00000042164	PABPC4	95	97.590	Cercocebus_atys
ENSTTRG00000014340	PABPC4	100	86.891	ENSCLAG00000011899	PABPC4	99	83.142	Chinchilla_lanigera
ENSTTRG00000014340	PABPC4	100	87.059	ENSCSAG00000001135	PABPC4	99	83.333	Chlorocebus_sabaeus
ENSTTRG00000014340	PABPC4	80	93.269	ENSCHOG00000005327	PABPC4	81	93.269	Choloepus_hoffmanni
ENSTTRG00000014340	PABPC4	99	75.758	ENSCPBG00000001038	PABPC4	99	67.201	Chrysemys_picta_bellii
ENSTTRG00000014340	PABPC4	100	86.891	ENSCANG00000034177	PABPC4	99	83.142	Colobus_angolensis_palliatus
ENSTTRG00000014340	PABPC4	98	85.836	ENSCGRG00001018166	Pabpc4	99	80.798	Cricetulus_griseus_chok1gshd
ENSTTRG00000014340	PABPC4	98	83.276	ENSCGRG00000009777	Pabpc4	99	77.947	Cricetulus_griseus_crigri
ENSTTRG00000014340	PABPC4	100	67.053	ENSCSEG00000000130	pabpc4	99	61.770	Cynoglossus_semilaevis
ENSTTRG00000014340	PABPC4	100	67.940	ENSCVAG00000019246	pabpc4	99	60.105	Cyprinodon_variegatus
ENSTTRG00000014340	PABPC4	99	69.646	ENSDARG00000059259	pabpc4	99	63.774	Danio_rerio
ENSTTRG00000014340	PABPC4	97	87.069	ENSDNOG00000018444	-	99	83.431	Dasypus_novemcinctus
ENSTTRG00000014340	PABPC4	100	84.370	ENSDORG00000011581	Pabpc4	99	80.268	Dipodomys_ordii
ENSTTRG00000014340	PABPC4	95	80.880	ENSETEG00000018453	-	75	81.453	Echinops_telfairi
ENSTTRG00000014340	PABPC4	95	53.641	ENSETEG00000009172	-	99	53.779	Echinops_telfairi
ENSTTRG00000014340	PABPC4	99	61.745	ENSEBUG00000000992	pabpc4	98	77.049	Eptatretus_burgeri
ENSTTRG00000014340	PABPC4	97	61.750	ENSEBUG00000013782	pabpc4	98	55.133	Eptatretus_burgeri
ENSTTRG00000014340	PABPC4	100	87.395	ENSEASG00005014119	PABPC4	99	83.716	Equus_asinus_asinus
ENSTTRG00000014340	PABPC4	100	87.395	ENSECAG00000009396	PABPC4	99	83.716	Equus_caballus
ENSTTRG00000014340	PABPC4	100	83.866	ENSEEUG00000002962	PABPC4	99	79.885	Erinaceus_europaeus
ENSTTRG00000014340	PABPC4	99	68.350	ENSELUG00000003195	pabpc4	98	60.177	Esox_lucius
ENSTTRG00000014340	PABPC4	100	87.563	ENSFCAG00000015254	-	99	83.908	Felis_catus
ENSTTRG00000014340	PABPC4	99	75.253	ENSFALG00000000543	PABPC4	99	66.667	Ficedula_albicollis
ENSTTRG00000014340	PABPC4	100	87.227	ENSFDAG00000020016	-	99	83.525	Fukomys_damarensis
ENSTTRG00000014340	PABPC4	99	65.045	ENSFDAG00000010581	-	100	65.045	Fukomys_damarensis
ENSTTRG00000014340	PABPC4	83	88.571	ENSFHEG00000007548	pabpc4	92	86.916	Fundulus_heteroclitus
ENSTTRG00000014340	PABPC4	99	67.559	ENSGMOG00000019025	pabpc4	98	62.595	Gadus_morhua
ENSTTRG00000014340	PABPC4	99	76.263	ENSGALG00000003800	PABPC4	99	71.785	Gallus_gallus
ENSTTRG00000014340	PABPC4	100	68.053	ENSGAFG00000018195	pabpc4	97	96.078	Gambusia_affinis
ENSTTRG00000014340	PABPC4	100	66.556	ENSGACG00000007179	pabpc4	99	58.319	Gasterosteus_aculeatus
ENSTTRG00000014340	PABPC4	99	75.758	ENSGAGG00000001888	PABPC4	99	66.132	Gopherus_agassizii
ENSTTRG00000014340	PABPC4	100	87.059	ENSGGOG00000004002	PABPC4	99	83.525	Gorilla_gorilla
ENSTTRG00000014340	PABPC4	100	67.715	ENSHBUG00000020206	pabpc4	99	62.712	Haplochromis_burtoni
ENSTTRG00000014340	PABPC4	100	87.059	ENSHGLG00000011162	PABPC4	99	83.333	Heterocephalus_glaber_female
ENSTTRG00000014340	PABPC4	100	84.538	ENSHGLG00100001580	PABPC4	99	80.460	Heterocephalus_glaber_male
ENSTTRG00000014340	PABPC4	100	66.833	ENSHCOG00000012694	pabpc4	99	61.509	Hippocampus_comes
ENSTTRG00000014340	PABPC4	98	67.121	ENSIPUG00000016620	pabpc4	99	59.507	Ictalurus_punctatus
ENSTTRG00000014340	PABPC4	100	84.538	ENSSTOG00000010416	PABPC4	99	80.651	Ictidomys_tridecemlineatus
ENSTTRG00000014340	PABPC4	100	85.210	ENSJJAG00000007781	Pabpc4	99	85.210	Jaculus_jaculus
ENSTTRG00000014340	PABPC4	99	67.667	ENSKMAG00000013597	pabpc4	98	59.011	Kryptolebias_marmoratus
ENSTTRG00000014340	PABPC4	100	66.997	ENSLBEG00000013654	pabpc4	99	61.654	Labrus_bergylta
ENSTTRG00000014340	PABPC4	99	72.241	ENSLACG00000011907	PABPC4	99	62.124	Latimeria_chalumnae
ENSTTRG00000014340	PABPC4	100	70.000	ENSLOCG00000001877	pabpc4	99	64.137	Lepisosteus_oculatus
ENSTTRG00000014340	PABPC4	100	87.563	ENSLAFG00000000151	PABPC4	99	83.908	Loxodonta_africana
ENSTTRG00000014340	PABPC4	100	87.059	ENSMFAG00000041481	PABPC4	99	83.333	Macaca_fascicularis
ENSTTRG00000014340	PABPC4	100	87.059	ENSMMUG00000007497	PABPC4	99	83.333	Macaca_mulatta
ENSTTRG00000014340	PABPC4	100	86.891	ENSMNEG00000043054	PABPC4	99	83.142	Macaca_nemestrina
ENSTTRG00000014340	PABPC4	100	87.059	ENSMLEG00000040716	PABPC4	95	97.590	Mandrillus_leucophaeus
ENSTTRG00000014340	PABPC4	99	67.563	ENSMAMG00000010025	pabpc4	98	66.431	Mastacembelus_armatus
ENSTTRG00000014340	PABPC4	100	67.384	ENSMZEG00005006141	pabpc4	91	87.736	Maylandia_zebra
ENSTTRG00000014340	PABPC4	99	76.134	ENSMGAG00000005408	PABPC4	99	67.616	Meleagris_gallopavo
ENSTTRG00000014340	PABPC4	53	89.423	ENSMAUG00000001295	-	97	89.423	Mesocricetus_auratus
ENSTTRG00000014340	PABPC4	100	61.937	ENSMICG00000036729	-	73	99.142	Microcebus_murinus
ENSTTRG00000014340	PABPC4	87	85.547	ENSMICG00000016633	-	97	98.723	Microcebus_murinus
ENSTTRG00000014340	PABPC4	99	86.735	ENSMOCG00000006763	Pabpc4	99	82.319	Microtus_ochrogaster
ENSTTRG00000014340	PABPC4	100	62.295	ENSMMOG00000002363	pabpc4	99	55.575	Mola_mola
ENSTTRG00000014340	PABPC4	98	77.358	ENSMODG00000017657	-	99	72.797	Monodelphis_domestica
ENSTTRG00000014340	PABPC4	50	56.467	ENSMODG00000018051	-	81	46.316	Monodelphis_domestica
ENSTTRG00000014340	PABPC4	99	67.337	ENSMALG00000011017	pabpc4	99	61.726	Monopterus_albus
ENSTTRG00000014340	PABPC4	99	72.373	MGP_CAROLIEiJ_G0024864	-	100	67.113	Mus_caroli
ENSTTRG00000014340	PABPC4	100	86.218	MGP_CAROLIEiJ_G0026435	-	99	82.375	Mus_caroli
ENSTTRG00000014340	PABPC4	100	86.218	ENSMUSG00000011257	Pabpc4	97	99.020	Mus_musculus
ENSTTRG00000014340	PABPC4	100	85.882	MGP_PahariEiJ_G0028765	Pabpc4	99	81.992	Mus_pahari
ENSTTRG00000014340	PABPC4	100	76.083	MGP_SPRETEiJ_G0027415	Pabpc4	99	82.759	Mus_spretus
ENSTTRG00000014340	PABPC4	100	87.563	ENSMPUG00000014414	-	99	83.908	Mustela_putorius_furo
ENSTTRG00000014340	PABPC4	85	60.215	ENSMPUG00000006836	-	77	59.000	Mustela_putorius_furo
ENSTTRG00000014340	PABPC4	100	79.664	ENSMLUG00000012068	PABPC4	99	74.904	Myotis_lucifugus
ENSTTRG00000014340	PABPC4	100	84.706	ENSNGAG00000018292	Pabpc4	99	80.651	Nannospalax_galili
ENSTTRG00000014340	PABPC4	57	56.808	ENSNBRG00000009708	pabpc4	96	56.808	Neolamprologus_brichardi
ENSTTRG00000014340	PABPC4	100	84.538	ENSNLEG00000011928	PABPC4	99	80.460	Nomascus_leucogenys
ENSTTRG00000014340	PABPC4	78	95.238	ENSOPRG00000011984	PABPC4	86	95.238	Ochotona_princeps
ENSTTRG00000014340	PABPC4	99	74.521	ENSODEG00000017434	-	94	92.342	Octodon_degus
ENSTTRG00000014340	PABPC4	100	86.218	ENSODEG00000006592	-	99	82.375	Octodon_degus
ENSTTRG00000014340	PABPC4	100	67.715	ENSONIG00000008176	pabpc4	99	59.019	Oreochromis_niloticus
ENSTTRG00000014340	PABPC4	99	75.589	ENSOANG00000010001	PABPC4	99	66.845	Ornithorhynchus_anatinus
ENSTTRG00000014340	PABPC4	95	86.067	ENSOCUG00000000562	PABPC4	88	82.389	Oryctolagus_cuniculus
ENSTTRG00000014340	PABPC4	99	67.395	ENSORLG00000017479	pabpc4	98	58.377	Oryzias_latipes
ENSTTRG00000014340	PABPC4	99	67.731	ENSORLG00020018644	pabpc4	90	85.577	Oryzias_latipes_hni
ENSTTRG00000014340	PABPC4	99	67.731	ENSORLG00015015042	pabpc4	98	58.907	Oryzias_latipes_hsok
ENSTTRG00000014340	PABPC4	99	67.899	ENSOMEG00000014410	pabpc4	98	79.661	Oryzias_melastigma
ENSTTRG00000014340	PABPC4	100	83.612	ENSOGAG00000004067	PABPC4	99	79.619	Otolemur_garnettii
ENSTTRG00000014340	PABPC4	100	87.227	ENSOARG00000020060	PABPC4	99	83.525	Ovis_aries
ENSTTRG00000014340	PABPC4	100	87.059	ENSPPAG00000043625	PABPC4	99	83.525	Pan_paniscus
ENSTTRG00000014340	PABPC4	100	87.563	ENSPPRG00000024727	PABPC4	99	83.908	Panthera_pardus
ENSTTRG00000014340	PABPC4	100	87.563	ENSPTIG00000005829	PABPC4	99	83.908	Panthera_tigris_altaica
ENSTTRG00000014340	PABPC4	100	87.059	ENSPTRG00000000573	PABPC4	99	83.525	Pan_troglodytes
ENSTTRG00000014340	PABPC4	100	87.227	ENSPANG00000009484	PABPC4	97	96.457	Papio_anubis
ENSTTRG00000014340	PABPC4	99	69.064	ENSPKIG00000025356	pabpc4	98	60.531	Paramormyrops_kingsleyae
ENSTTRG00000014340	PABPC4	99	75.926	ENSPSIG00000016892	PABPC4	99	67.380	Pelodiscus_sinensis
ENSTTRG00000014340	PABPC4	100	64.214	ENSPMGG00000009073	pabpc4	98	55.496	Periophthalmus_magnuspinnatus
ENSTTRG00000014340	PABPC4	100	81.431	ENSPEMG00000024193	-	99	81.431	Peromyscus_maniculatus_bairdii
ENSTTRG00000014340	PABPC4	100	85.378	ENSPEMG00000023569	-	99	81.418	Peromyscus_maniculatus_bairdii
ENSTTRG00000014340	PABPC4	87	57.671	ENSPMAG00000002836	pabpc4	99	96.040	Petromyzon_marinus
ENSTTRG00000014340	PABPC4	97	55.000	ENSPMAG00000007885	pabpc4	99	54.562	Petromyzon_marinus
ENSTTRG00000014340	PABPC4	98	76.289	ENSPCIG00000020674	PABPC4	92	87.500	Phascolarctos_cinereus
ENSTTRG00000014340	PABPC4	100	67.330	ENSPFOG00000002682	pabpc4	99	59.649	Poecilia_formosa
ENSTTRG00000014340	PABPC4	100	67.164	ENSPLAG00000010112	pabpc4	99	60.175	Poecilia_latipinna
ENSTTRG00000014340	PABPC4	99	67.622	ENSPMEG00000019739	pabpc4	99	59.825	Poecilia_mexicana
ENSTTRG00000014340	PABPC4	100	67.662	ENSPREG00000001589	pabpc4	92	82.400	Poecilia_reticulata
ENSTTRG00000014340	PABPC4	100	87.059	ENSPPYG00000001506	PABPC4	99	83.525	Pongo_abelii
ENSTTRG00000014340	PABPC4	100	81.849	ENSPCAG00000003341	PABPC4	99	77.395	Procavia_capensis
ENSTTRG00000014340	PABPC4	99	75.263	ENSPCOG00000025882	-	83	91.845	Propithecus_coquereli
ENSTTRG00000014340	PABPC4	100	86.242	ENSPCOG00000023725	-	99	82.600	Propithecus_coquereli
ENSTTRG00000014340	PABPC4	100	87.227	ENSPVAG00000002187	PABPC4	100	83.525	Pteropus_vampyrus
ENSTTRG00000014340	PABPC4	100	67.550	ENSPNYG00000006134	pabpc4	99	62.524	Pundamilia_nyererei
ENSTTRG00000014340	PABPC4	100	67.774	ENSPNAG00000024355	pabpc4	99	62.760	Pygocentrus_nattereri
ENSTTRG00000014340	PABPC4	100	83.361	ENSRNOG00000015642	Pabpc4	99	79.502	Rattus_norvegicus
ENSTTRG00000014340	PABPC4	100	81.849	ENSRNOG00000028592	AABR07035074.1	99	78.161	Rattus_norvegicus
ENSTTRG00000014340	PABPC4	100	87.059	ENSRBIG00000039761	PABPC4	99	83.333	Rhinopithecus_bieti
ENSTTRG00000014340	PABPC4	100	87.059	ENSRROG00000033355	PABPC4	99	83.333	Rhinopithecus_roxellana
ENSTTRG00000014340	PABPC4	100	87.059	ENSSBOG00000026193	PABPC4	99	83.525	Saimiri_boliviensis_boliviensis
ENSTTRG00000014340	PABPC4	98	76.117	ENSSHAG00000018139	PABPC4	99	71.401	Sarcophilus_harrisii
ENSTTRG00000014340	PABPC4	99	70.067	ENSSFOG00015023514	pabpc4	92	61.552	Scleropages_formosus
ENSTTRG00000014340	PABPC4	99	67.450	ENSSMAG00000009007	pabpc4	98	61.759	Scophthalmus_maximus
ENSTTRG00000014340	PABPC4	99	67.563	ENSSDUG00000012683	pabpc4	94	85.217	Seriola_dumerili
ENSTTRG00000014340	PABPC4	79	87.736	ENSSLDG00000013025	pabpc4	95	85.217	Seriola_lalandi_dorsalis
ENSTTRG00000014340	PABPC4	100	86.555	ENSSARG00000000310	PABPC4	94	82.759	Sorex_araneus
ENSTTRG00000014340	PABPC4	99	75.758	ENSSPUG00000003204	PABPC4	99	67.201	Sphenodon_punctatus
ENSTTRG00000014340	PABPC4	99	67.953	ENSSPAG00000009252	pabpc4	98	62.500	Stegastes_partitus
ENSTTRG00000014340	PABPC4	100	87.731	ENSSSCG00000003660	-	87	99.156	Sus_scrofa
ENSTTRG00000014340	PABPC4	99	46.379	ENSSSCG00000036170	-	96	46.379	Sus_scrofa
ENSTTRG00000014340	PABPC4	99	76.007	ENSTGUG00000001266	PABPC4	99	67.496	Taeniopygia_guttata
ENSTTRG00000014340	PABPC4	100	66.667	ENSTRUG00000005907	pabpc4	98	61.553	Takifugu_rubripes
ENSTTRG00000014340	PABPC4	100	63.545	ENSTNIG00000016902	pabpc4	98	56.762	Tetraodon_nigroviridis
ENSTTRG00000014340	PABPC4	100	84.034	ENSTBEG00000009035	PABPC4	100	84.034	Tupaia_belangeri
ENSTTRG00000014340	PABPC4	100	87.227	ENSUAMG00000000303	PABPC4	99	83.525	Ursus_americanus
ENSTTRG00000014340	PABPC4	100	87.227	ENSUMAG00000019585	PABPC4	99	99.057	Ursus_maritimus
ENSTTRG00000014340	PABPC4	63	97.872	ENSVPAG00000010041	PABPC4	59	97.872	Vicugna_pacos
ENSTTRG00000014340	PABPC4	100	87.395	ENSVVUG00000005215	PABPC4	99	83.716	Vulpes_vulpes
ENSTTRG00000014340	PABPC4	99	66.948	ENSXETG00000010946	pabpc4	89	60.963	Xenopus_tropicalis
ENSTTRG00000014340	PABPC4	100	67.893	ENSXCOG00000013190	pabpc4	93	81.897	Xiphophorus_couchianus
ENSTTRG00000014340	PABPC4	100	67.662	ENSXMAG00000019007	pabpc4	99	60.175	Xiphophorus_maculatus