EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000014778 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 39079 bases
Position: chrscaffold_115214:57035-96113
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000014015	EST1	PF10374.9	4.3e-25	1	1
ENSTTRP00000014015	EST1_DNA_bind	PF10373.9	1.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000014781	SMG7-201	3516	-	ENSTTRP00000014015	1171 (aa)	-	UPI00018B6A2A

Gene Model

Click here to download ENSTTRG00000014778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000014778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000014778	SMG7	100	95.986	ENSG00000116698	SMG7	100	97.751	Homo_sapiens
ENSTTRG00000014778	SMG7	83	71.257	ENSAPOG00000009611	smg7	92	71.861	Acanthochromis_polyacanthus
ENSTTRG00000014778	SMG7	91	93.412	ENSAMEG00000002357	SMG7	97	93.412	Ailuropoda_melanoleuca
ENSTTRG00000014778	SMG7	91	59.505	ENSACIG00000015152	smg7	97	59.682	Amphilophus_citrinellus
ENSTTRG00000014778	SMG7	94	64.280	ENSAOCG00000013538	smg7	96	64.450	Amphiprion_ocellaris
ENSTTRG00000014778	SMG7	94	64.140	ENSAPEG00000007851	smg7	96	64.310	Amphiprion_percula
ENSTTRG00000014778	SMG7	94	61.662	ENSATEG00000006931	smg7	96	61.872	Anabas_testudineus
ENSTTRG00000014778	SMG7	93	81.501	ENSAPLG00000015811	SMG7	96	81.326	Anas_platyrhynchos
ENSTTRG00000014778	SMG7	94	83.753	ENSACAG00000014989	SMG7	96	84.101	Anolis_carolinensis
ENSTTRG00000014778	SMG7	99	95.671	ENSANAG00000028114	SMG7	99	95.047	Aotus_nancymaae
ENSTTRG00000014778	SMG7	94	63.506	ENSACLG00000022079	smg7	96	64.017	Astatotilapia_calliptera
ENSTTRG00000014778	SMG7	94	65.771	ENSAMXG00000020809	smg7	96	66.061	Astyanax_mexicanus
ENSTTRG00000014778	SMG7	94	97.352	ENSBTAG00000008003	SMG7	94	97.352	Bos_taurus
ENSTTRG00000014778	SMG7	100	95.474	ENSCJAG00000005135	SMG7	99	95.047	Callithrix_jacchus
ENSTTRG00000014778	SMG7	94	97.808	ENSCAFG00000013276	SMG7	94	97.808	Canis_familiaris
ENSTTRG00000014778	SMG7	94	97.808	ENSCAFG00020015475	SMG7	94	97.808	Canis_lupus_dingo
ENSTTRG00000014778	SMG7	94	97.352	ENSCHIG00000018192	SMG7	96	97.352	Capra_hircus
ENSTTRG00000014778	SMG7	100	94.108	ENSTSYG00000002667	SMG7	99	93.766	Carlito_syrichta
ENSTTRG00000014778	SMG7	94	96.804	ENSCPOG00000008906	SMG7	96	95.890	Cavia_porcellus
ENSTTRG00000014778	SMG7	91	92.960	ENSCCAG00000028596	SMG7	97	92.960	Cebus_capucinus
ENSTTRG00000014778	SMG7	94	97.443	ENSCATG00000011063	SMG7	94	97.443	Cercocebus_atys
ENSTTRG00000014778	SMG7	94	96.438	ENSCLAG00000010751	SMG7	96	96.438	Chinchilla_lanigera
ENSTTRG00000014778	SMG7	94	97.443	ENSCSAG00000012654	SMG7	94	97.443	Chlorocebus_sabaeus
ENSTTRG00000014778	SMG7	96	87.166	ENSCHOG00000010522	SMG7	100	87.433	Choloepus_hoffmanni
ENSTTRG00000014778	SMG7	94	88.199	ENSCPBG00000015724	SMG7	96	88.024	Chrysemys_picta_bellii
ENSTTRG00000014778	SMG7	91	93.231	ENSCANG00000015680	SMG7	97	93.231	Colobus_angolensis_palliatus
ENSTTRG00000014778	SMG7	94	95.434	ENSCGRG00001013705	Smg7	96	95.434	Cricetulus_griseus_chok1gshd
ENSTTRG00000014778	SMG7	94	95.434	ENSCGRG00000018401	Smg7	95	95.434	Cricetulus_griseus_crigri
ENSTTRG00000014778	SMG7	93	62.243	ENSCVAG00000011842	smg7	97	63.804	Cyprinodon_variegatus
ENSTTRG00000014778	SMG7	94	65.547	ENSDARG00000060767	smg7	96	65.633	Danio_rerio
ENSTTRG00000014778	SMG7	94	95.890	ENSDORG00000007331	Smg7	96	95.890	Dipodomys_ordii
ENSTTRG00000014778	SMG7	94	95.890	ENSETEG00000002654	SMG7	99	95.890	Echinops_telfairi
ENSTTRG00000014778	SMG7	94	98.082	ENSEASG00005006524	SMG7	96	98.082	Equus_asinus_asinus
ENSTTRG00000014778	SMG7	94	98.174	ENSECAG00000004313	SMG7	96	98.174	Equus_caballus
ENSTTRG00000014778	SMG7	99	95.592	ENSEEUG00000002024	SMG7	98	95.246	Erinaceus_europaeus
ENSTTRG00000014778	SMG7	87	77.206	ENSELUG00000010293	smg7	99	64.334	Esox_lucius
ENSTTRG00000014778	SMG7	100	95.474	ENSFCAG00000010900	SMG7	96	98.023	Felis_catus
ENSTTRG00000014778	SMG7	93	81.651	ENSFALG00000003047	SMG7	97	82.002	Ficedula_albicollis
ENSTTRG00000014778	SMG7	93	96.709	ENSFDAG00000012121	SMG7	96	96.590	Fukomys_damarensis
ENSTTRG00000014778	SMG7	94	60.121	ENSFHEG00000011073	smg7	96	59.370	Fundulus_heteroclitus
ENSTTRG00000014778	SMG7	86	67.695	ENSGMOG00000004916	smg7	91	67.695	Gadus_morhua
ENSTTRG00000014778	SMG7	94	81.098	ENSGALG00000004667	SMG7	96	81.359	Gallus_gallus
ENSTTRG00000014778	SMG7	94	60.155	ENSGAFG00000019000	smg7	96	59.725	Gambusia_affinis
ENSTTRG00000014778	SMG7	94	64.721	ENSGACG00000001634	smg7	98	64.753	Gasterosteus_aculeatus
ENSTTRG00000014778	SMG7	94	97.169	ENSGGOG00000002342	SMG7	94	97.169	Gorilla_gorilla
ENSTTRG00000014778	SMG7	94	64.103	ENSHBUG00000003726	smg7	98	67.485	Haplochromis_burtoni
ENSTTRG00000014778	SMG7	93	96.498	ENSHGLG00000009353	SMG7	97	96.498	Heterocephalus_glaber_female
ENSTTRG00000014778	SMG7	93	94.747	ENSHGLG00100009637	-	97	94.747	Heterocephalus_glaber_male
ENSTTRG00000014778	SMG7	94	88.493	ENSHGLG00100004878	-	96	88.493	Heterocephalus_glaber_male
ENSTTRG00000014778	SMG7	94	66.435	ENSIPUG00000016997	smg7	96	66.696	Ictalurus_punctatus
ENSTTRG00000014778	SMG7	94	97.260	ENSSTOG00000000401	SMG7	96	97.260	Ictidomys_tridecemlineatus
ENSTTRG00000014778	SMG7	94	95.160	ENSJJAG00000012351	Smg7	96	95.160	Jaculus_jaculus
ENSTTRG00000014778	SMG7	91	58.093	ENSKMAG00000004900	smg7	97	58.355	Kryptolebias_marmoratus
ENSTTRG00000014778	SMG7	94	61.803	ENSLBEG00000002983	smg7	96	61.717	Labrus_bergylta
ENSTTRG00000014778	SMG7	94	74.529	ENSLACG00000000972	SMG7	96	74.596	Latimeria_chalumnae
ENSTTRG00000014778	SMG7	94	66.350	ENSLOCG00000002010	smg7	96	66.437	Lepisosteus_oculatus
ENSTTRG00000014778	SMG7	94	96.895	ENSLAFG00000008186	SMG7	96	96.895	Loxodonta_africana
ENSTTRG00000014778	SMG7	94	97.352	ENSMFAG00000031653	SMG7	96	97.352	Macaca_fascicularis
ENSTTRG00000014778	SMG7	100	96.243	ENSMMUG00000018458	SMG7	99	96.243	Macaca_mulatta
ENSTTRG00000014778	SMG7	91	93.321	ENSMNEG00000034798	SMG7	97	93.321	Macaca_nemestrina
ENSTTRG00000014778	SMG7	94	97.443	ENSMLEG00000037170	SMG7	94	97.443	Mandrillus_leucophaeus
ENSTTRG00000014778	SMG7	85	63.780	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSTTRG00000014778	SMG7	94	63.969	ENSMZEG00005015247	smg7	96	64.017	Maylandia_zebra
ENSTTRG00000014778	SMG7	94	80.907	ENSMGAG00000001561	SMG7	96	81.168	Meleagris_gallopavo
ENSTTRG00000014778	SMG7	94	95.890	ENSMAUG00000019484	Smg7	96	95.941	Mesocricetus_auratus
ENSTTRG00000014778	SMG7	94	97.352	ENSMICG00000007145	SMG7	95	97.352	Microcebus_murinus
ENSTTRG00000014778	SMG7	94	95.708	ENSMOCG00000020748	Smg7	96	95.708	Microtus_ochrogaster
ENSTTRG00000014778	SMG7	94	59.725	ENSMMOG00000001524	smg7	96	59.793	Mola_mola
ENSTTRG00000014778	SMG7	89	85.256	ENSMODG00000007139	SMG7	99	85.256	Monodelphis_domestica
ENSTTRG00000014778	SMG7	94	63.216	ENSMALG00000000061	smg7	89	65.156	Monopterus_albus
ENSTTRG00000014778	SMG7	94	95.434	MGP_CAROLIEiJ_G0014704	Smg7	96	95.068	Mus_caroli
ENSTTRG00000014778	SMG7	94	95.342	ENSMUSG00000042772	Smg7	96	95.342	Mus_musculus
ENSTTRG00000014778	SMG7	94	95.434	MGP_PahariEiJ_G0027940	Smg7	96	95.434	Mus_pahari
ENSTTRG00000014778	SMG7	94	95.434	MGP_SPRETEiJ_G0015511	Smg7	96	95.434	Mus_spretus
ENSTTRG00000014778	SMG7	93	97.604	ENSMPUG00000011732	SMG7	94	97.604	Mustela_putorius_furo
ENSTTRG00000014778	SMG7	94	97.352	ENSMLUG00000015417	SMG7	96	97.352	Myotis_lucifugus
ENSTTRG00000014778	SMG7	94	95.799	ENSNGAG00000009836	Smg7	96	94.886	Nannospalax_galili
ENSTTRG00000014778	SMG7	92	56.995	ENSNBRG00000024343	smg7	95	65.896	Neolamprologus_brichardi
ENSTTRG00000014778	SMG7	94	97.534	ENSNLEG00000018018	SMG7	94	97.534	Nomascus_leucogenys
ENSTTRG00000014778	SMG7	75	85.997	ENSMEUG00000004681	SMG7	77	86.192	Notamacropus_eugenii
ENSTTRG00000014778	SMG7	100	80.786	ENSOPRG00000013942	SMG7	99	80.615	Ochotona_princeps
ENSTTRG00000014778	SMG7	94	96.347	ENSODEG00000010390	SMG7	96	96.347	Octodon_degus
ENSTTRG00000014778	SMG7	94	60.645	ENSONIG00000000277	smg7	96	61.301	Oreochromis_niloticus
ENSTTRG00000014778	SMG7	93	90.376	ENSOANG00000000994	SMG7	97	90.651	Ornithorhynchus_anatinus
ENSTTRG00000014778	SMG7	94	90.320	ENSOCUG00000005887	SMG7	89	90.320	Oryctolagus_cuniculus
ENSTTRG00000014778	SMG7	94	60.794	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSTTRG00000014778	SMG7	94	61.226	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSTTRG00000014778	SMG7	93	63.523	ENSORLG00015012289	smg7	96	61.790	Oryzias_latipes_hsok
ENSTTRG00000014778	SMG7	94	61.618	ENSOMEG00000002328	smg7	96	61.704	Oryzias_melastigma
ENSTTRG00000014778	SMG7	100	94.364	ENSOGAG00000003107	SMG7	99	93.424	Otolemur_garnettii
ENSTTRG00000014778	SMG7	94	97.078	ENSOARG00000001352	SMG7	94	97.078	Ovis_aries
ENSTTRG00000014778	SMG7	91	93.321	ENSPPAG00000031619	SMG7	97	93.321	Pan_paniscus
ENSTTRG00000014778	SMG7	100	95.730	ENSPPRG00000011222	SMG7	98	95.730	Panthera_pardus
ENSTTRG00000014778	SMG7	100	95.730	ENSPTIG00000007242	SMG7	98	95.730	Panthera_tigris_altaica
ENSTTRG00000014778	SMG7	100	96.243	ENSPTRG00000001764	SMG7	99	96.243	Pan_troglodytes
ENSTTRG00000014778	SMG7	100	96.328	ENSPANG00000004520	SMG7	99	96.328	Papio_anubis
ENSTTRG00000014778	SMG7	94	62.544	ENSPKIG00000007242	smg7	96	64.505	Paramormyrops_kingsleyae
ENSTTRG00000014778	SMG7	94	91.332	ENSPSIG00000012201	SMG7	96	90.602	Pelodiscus_sinensis
ENSTTRG00000014778	SMG7	94	94.612	ENSPEMG00000011315	Smg7	96	94.612	Peromyscus_maniculatus_bairdii
ENSTTRG00000014778	SMG7	94	89.317	ENSPCIG00000003786	SMG7	96	89.142	Phascolarctos_cinereus
ENSTTRG00000014778	SMG7	94	62.199	ENSPFOG00000019219	smg7	96	62.403	Poecilia_formosa
ENSTTRG00000014778	SMG7	94	60.086	ENSPLAG00000001446	smg7	96	60.000	Poecilia_latipinna
ENSTTRG00000014778	SMG7	94	60.361	ENSPMEG00000005218	smg7	99	60.275	Poecilia_mexicana
ENSTTRG00000014778	SMG7	84	60.190	ENSPREG00000019039	smg7	91	60.419	Poecilia_reticulata
ENSTTRG00000014778	SMG7	94	89.308	ENSPPYG00000000427	SMG7	96	89.308	Pongo_abelii
ENSTTRG00000014778	SMG7	99	83.534	ENSPCAG00000008360	SMG7	100	83.362	Procavia_capensis
ENSTTRG00000014778	SMG7	100	96.413	ENSPCOG00000011996	SMG7	99	96.413	Propithecus_coquereli
ENSTTRG00000014778	SMG7	100	86.348	ENSPVAG00000000851	SMG7	99	85.922	Pteropus_vampyrus
ENSTTRG00000014778	SMG7	94	63.955	ENSPNYG00000007643	smg7	96	63.784	Pundamilia_nyererei
ENSTTRG00000014778	SMG7	94	65.976	ENSPNAG00000011374	smg7	96	65.630	Pygocentrus_nattereri
ENSTTRG00000014778	SMG7	94	95.438	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSTTRG00000014778	SMG7	94	97.352	ENSRBIG00000036316	SMG7	94	97.352	Rhinopithecus_bieti
ENSTTRG00000014778	SMG7	94	97.352	ENSRROG00000035719	SMG7	96	97.352	Rhinopithecus_roxellana
ENSTTRG00000014778	SMG7	94	97.078	ENSSBOG00000023454	SMG7	96	97.078	Saimiri_boliviensis_boliviensis
ENSTTRG00000014778	SMG7	93	85.364	ENSSHAG00000013147	SMG7	96	85.026	Sarcophilus_harrisii
ENSTTRG00000014778	SMG7	94	66.057	ENSSFOG00015017252	smg7	95	69.281	Scleropages_formosus
ENSTTRG00000014778	SMG7	94	64.058	ENSSMAG00000006067	smg7	96	64.034	Scophthalmus_maximus
ENSTTRG00000014778	SMG7	87	71.766	ENSSDUG00000017543	smg7	96	61.172	Seriola_dumerili
ENSTTRG00000014778	SMG7	94	82.271	ENSSPUG00000002064	SMG7	96	82.096	Sphenodon_punctatus
ENSTTRG00000014778	SMG7	92	61.431	ENSSPAG00000008733	smg7	95	61.203	Stegastes_partitus
ENSTTRG00000014778	SMG7	94	98.265	ENSSSCG00000015558	SMG7	96	98.265	Sus_scrofa
ENSTTRG00000014778	SMG7	94	80.749	ENSTGUG00000003928	SMG7	97	81.098	Taeniopygia_guttata
ENSTTRG00000014778	SMG7	94	63.043	ENSTNIG00000002802	smg7	96	62.827	Tetraodon_nigroviridis
ENSTTRG00000014778	SMG7	81	92.918	ENSTBEG00000003220	SMG7	81	93.348	Tupaia_belangeri
ENSTTRG00000014778	SMG7	91	93.032	ENSUAMG00000017473	SMG7	96	93.032	Ursus_americanus
ENSTTRG00000014778	SMG7	91	97.646	ENSUMAG00000016389	SMG7	97	97.646	Ursus_maritimus
ENSTTRG00000014778	SMG7	94	97.900	ENSVVUG00000008976	SMG7	96	97.907	Vulpes_vulpes
ENSTTRG00000014778	SMG7	94	65.060	ENSXETG00000012528	smg7	96	65.341	Xenopus_tropicalis
ENSTTRG00000014778	SMG7	94	60.034	ENSXMAG00000007123	smg7	96	60.207	Xiphophorus_maculatus