EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000015523 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 12343 bases
Position: chrGeneScaffold_2734:92123-104465
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000014711	MBD	PF01429.19	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000015525	MBD1-201	1824	-	ENSTTRP00000014711	607 (aa)	-	UPI00018B7980

Gene Model

Click here to download ENSTTRG00000015523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000015523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000015523	MBD1	100	84.349	ENSG00000141644	MBD1	99	90.506	Homo_sapiens
ENSTTRG00000015523	MBD1	100	85.285	ENSAMEG00000000238	MBD1	96	84.494	Ailuropoda_melanoleuca
ENSTTRG00000015523	MBD1	63	43.489	ENSACAG00000006091	-	100	43.489	Anolis_carolinensis
ENSTTRG00000015523	MBD1	98	84.007	ENSANAG00000036253	MBD1	100	80.380	Aotus_nancymaae
ENSTTRG00000015523	MBD1	100	88.633	ENSBTAG00000003801	MBD1	100	88.303	Bos_taurus
ENSTTRG00000015523	MBD1	98	83.838	ENSCJAG00000004959	MBD1	100	79.037	Callithrix_jacchus
ENSTTRG00000015523	MBD1	98	94.318	ENSCAFG00000018928	MBD1	96	83.861	Canis_familiaris
ENSTTRG00000015523	MBD1	99	83.974	ENSCAFG00020024272	MBD1	97	83.013	Canis_lupus_dingo
ENSTTRG00000015523	MBD1	100	88.303	ENSCHIG00000021134	MBD1	100	87.974	Capra_hircus
ENSTTRG00000015523	MBD1	98	84.343	ENSTSYG00000000509	MBD1	100	79.430	Carlito_syrichta
ENSTTRG00000015523	MBD1	98	64.759	ENSCAPG00000015782	MBD1	96	64.458	Cavia_aperea
ENSTTRG00000015523	MBD1	100	70.186	ENSCPOG00000001671	MBD1	100	68.012	Cavia_porcellus
ENSTTRG00000015523	MBD1	100	83.522	ENSCCAG00000034600	MBD1	90	82.828	Cebus_capucinus
ENSTTRG00000015523	MBD1	100	84.514	ENSCATG00000029959	MBD1	100	85.008	Cercocebus_atys
ENSTTRG00000015523	MBD1	100	77.373	ENSCLAG00000007457	MBD1	89	76.582	Chinchilla_lanigera
ENSTTRG00000015523	MBD1	100	84.514	ENSCSAG00000018070	MBD1	100	85.008	Chlorocebus_sabaeus
ENSTTRG00000015523	MBD1	100	84.514	ENSCANG00000033425	MBD1	100	85.008	Colobus_angolensis_palliatus
ENSTTRG00000015523	MBD1	100	72.013	ENSCGRG00001014843	Mbd1	100	71.849	Cricetulus_griseus_chok1gshd
ENSTTRG00000015523	MBD1	99	49.363	ENSCGRG00000014135	Mbd1	96	56.000	Cricetulus_griseus_crigri
ENSTTRG00000015523	MBD1	100	76.266	ENSDNOG00000015998	MBD1	100	76.266	Dasypus_novemcinctus
ENSTTRG00000015523	MBD1	90	79.635	ENSDORG00000013917	Mbd1	97	78.723	Dipodomys_ordii
ENSTTRG00000015523	MBD1	98	88.889	ENSEASG00005003857	MBD1	100	84.494	Equus_asinus_asinus
ENSTTRG00000015523	MBD1	100	88.962	ENSECAG00000011497	MBD1	80	88.962	Equus_caballus
ENSTTRG00000015523	MBD1	98	88.384	ENSFCAG00000015730	MBD1	100	84.335	Felis_catus
ENSTTRG00000015523	MBD1	90	78.679	ENSFDAG00000011085	MBD1	96	76.577	Fukomys_damarensis
ENSTTRG00000015523	MBD1	100	84.349	ENSGGOG00000016966	MBD1	100	84.843	Gorilla_gorilla
ENSTTRG00000015523	MBD1	100	80.725	ENSHGLG00000008740	MBD1	100	80.231	Heterocephalus_glaber_female
ENSTTRG00000015523	MBD1	81	89.394	ENSHGLG00100005198	MBD1	100	89.354	Heterocephalus_glaber_male
ENSTTRG00000015523	MBD1	100	78.282	ENSSTOG00000007780	MBD1	100	77.958	Ictidomys_tridecemlineatus
ENSTTRG00000015523	MBD1	81	81.459	ENSJJAG00000022859	Mbd1	88	80.183	Jaculus_jaculus
ENSTTRG00000015523	MBD1	65	39.798	ENSLACG00000002414	-	58	39.747	Latimeria_chalumnae
ENSTTRG00000015523	MBD1	99	75.000	ENSLAFG00000031328	MBD1	97	75.000	Loxodonta_africana
ENSTTRG00000015523	MBD1	100	85.667	ENSMFAG00000026335	MBD1	100	85.008	Macaca_fascicularis
ENSTTRG00000015523	MBD1	100	82.278	ENSMMUG00000009050	MBD1	100	81.487	Macaca_mulatta
ENSTTRG00000015523	MBD1	100	85.667	ENSMNEG00000038822	MBD1	100	85.008	Macaca_nemestrina
ENSTTRG00000015523	MBD1	100	84.514	ENSMLEG00000043121	MBD1	100	85.008	Mandrillus_leucophaeus
ENSTTRG00000015523	MBD1	65	36.410	ENSMAMG00000023341	-	61	34.946	Mastacembelus_armatus
ENSTTRG00000015523	MBD1	100	83.604	ENSMICG00000006414	MBD1	100	86.647	Microcebus_murinus
ENSTTRG00000015523	MBD1	64	42.822	ENSMODG00000001286	-	57	43.457	Monodelphis_domestica
ENSTTRG00000015523	MBD1	99	64.501	ENSMUSG00000024561	Mbd1	97	64.501	Mus_musculus
ENSTTRG00000015523	MBD1	100	64.501	MGP_PahariEiJ_G0019128	Mbd1	100	64.342	Mus_pahari
ENSTTRG00000015523	MBD1	98	65.913	MGP_SPRETEiJ_G0023304	Mbd1	99	65.913	Mus_spretus
ENSTTRG00000015523	MBD1	100	84.335	ENSMPUG00000008843	MBD1	96	83.544	Mustela_putorius_furo
ENSTTRG00000015523	MBD1	100	81.962	ENSMLUG00000008286	MBD1	96	80.696	Myotis_lucifugus
ENSTTRG00000015523	MBD1	98	64.474	ENSNGAG00000011412	Mbd1	96	63.322	Nannospalax_galili
ENSTTRG00000015523	MBD1	98	66.330	ENSNLEG00000032711	-	89	66.835	Nomascus_leucogenys
ENSTTRG00000015523	MBD1	100	85.008	ENSNLEG00000011661	-	100	84.349	Nomascus_leucogenys
ENSTTRG00000015523	MBD1	100	69.852	ENSOPRG00000007647	MBD1	100	69.852	Ochotona_princeps
ENSTTRG00000015523	MBD1	93	78.632	ENSODEG00000018451	MBD1	97	78.632	Octodon_degus
ENSTTRG00000015523	MBD1	85	45.966	ENSOANG00000014593	-	100	45.541	Ornithorhynchus_anatinus
ENSTTRG00000015523	MBD1	100	76.741	ENSOCUG00000006554	MBD1	100	76.108	Oryctolagus_cuniculus
ENSTTRG00000015523	MBD1	100	78.159	ENSOGAG00000003784	MBD1	96	74.883	Otolemur_garnettii
ENSTTRG00000015523	MBD1	100	84.518	ENSOARG00000004218	MBD1	95	83.254	Ovis_aries
ENSTTRG00000015523	MBD1	100	84.185	ENSPPAG00000038886	MBD1	100	84.679	Pan_paniscus
ENSTTRG00000015523	MBD1	100	88.797	ENSPPRG00000021387	MBD1	100	88.797	Panthera_pardus
ENSTTRG00000015523	MBD1	100	88.633	ENSPTIG00000021231	MBD1	100	88.633	Panthera_tigris_altaica
ENSTTRG00000015523	MBD1	100	84.185	ENSPTRG00000010021	MBD1	100	84.679	Pan_troglodytes
ENSTTRG00000015523	MBD1	98	84.175	ENSPANG00000010867	MBD1	100	81.487	Papio_anubis
ENSTTRG00000015523	MBD1	99	56.982	ENSPEMG00000022630	Mbd1	97	57.282	Peromyscus_maniculatus_bairdii
ENSTTRG00000015523	MBD1	96	46.192	ENSPCIG00000027937	-	79	45.977	Phascolarctos_cinereus
ENSTTRG00000015523	MBD1	100	85.667	ENSPPYG00000009158	MBD1	91	85.008	Pongo_abelii
ENSTTRG00000015523	MBD1	99	76.403	ENSPCAG00000001648	MBD1	99	76.403	Procavia_capensis
ENSTTRG00000015523	MBD1	100	86.161	ENSPCOG00000012450	MBD1	100	89.329	Propithecus_coquereli
ENSTTRG00000015523	MBD1	99	51.212	ENSRNOG00000024104	Mbd1	96	51.378	Rattus_norvegicus
ENSTTRG00000015523	MBD1	100	75.947	ENSRBIG00000041294	MBD1	100	76.606	Rhinopithecus_bieti
ENSTTRG00000015523	MBD1	100	84.020	ENSRROG00000032517	MBD1	100	84.514	Rhinopithecus_roxellana
ENSTTRG00000015523	MBD1	98	85.185	ENSSBOG00000027169	MBD1	90	84.512	Saimiri_boliviensis_boliviensis
ENSTTRG00000015523	MBD1	76	45.299	ENSSHAG00000003661	-	100	46.170	Sarcophilus_harrisii
ENSTTRG00000015523	MBD1	100	86.491	ENSSSCG00000004516	MBD1	100	85.667	Sus_scrofa
ENSTTRG00000015523	MBD1	68	72.500	ENSTBEG00000012651	-	68	72.500	Tupaia_belangeri
ENSTTRG00000015523	MBD1	100	83.361	ENSUAMG00000004752	MBD1	100	84.349	Ursus_americanus
ENSTTRG00000015523	MBD1	100	88.797	ENSUMAG00000002947	MBD1	100	88.797	Ursus_maritimus