EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000016715 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 15421 bases
Position: chrGeneScaffold_464:55982-71402
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000015848	zf-U11-48K	PF05253.12	2.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000016715	SNRNP48-201	1020	-	ENSTTRP00000015848	339 (aa)	-	UPI00018B5609

Gene Model

Click here to download ENSTTRG00000016715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000016715's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000016715	SNRNP48	100	90.265	ENSG00000168566	SNRNP48	100	90.265	Homo_sapiens
ENSTTRG00000016715	SNRNP48	81	47.535	ENSAPOG00000021430	snrnp48	91	43.155	Acanthochromis_polyacanthus
ENSTTRG00000016715	SNRNP48	99	87.608	ENSAMEG00000017349	SNRNP48	100	86.744	Ailuropoda_melanoleuca
ENSTTRG00000016715	SNRNP48	83	46.127	ENSACIG00000002032	snrnp48	91	42.169	Amphilophus_citrinellus
ENSTTRG00000016715	SNRNP48	81	47.535	ENSAOCG00000010562	snrnp48	91	43.881	Amphiprion_ocellaris
ENSTTRG00000016715	SNRNP48	81	47.163	ENSAPEG00000003231	snrnp48	91	43.544	Amphiprion_percula
ENSTTRG00000016715	SNRNP48	72	53.036	ENSATEG00000020210	snrnp48	80	49.462	Anabas_testudineus
ENSTTRG00000016715	SNRNP48	82	65.517	ENSACAG00000002811	SNRNP48	89	65.517	Anolis_carolinensis
ENSTTRG00000016715	SNRNP48	100	90.265	ENSANAG00000033538	SNRNP48	100	90.265	Aotus_nancymaae
ENSTTRG00000016715	SNRNP48	91	45.426	ENSAMXG00000015309	snrnp48	93	44.207	Astyanax_mexicanus
ENSTTRG00000016715	SNRNP48	100	87.059	ENSBTAG00000001123	SNRNP48	100	87.941	Bos_taurus
ENSTTRG00000016715	SNRNP48	100	90.560	ENSCJAG00000021330	SNRNP48	100	90.560	Callithrix_jacchus
ENSTTRG00000016715	SNRNP48	99	89.881	ENSCAFG00000009574	SNRNP48	83	89.911	Canis_familiaris
ENSTTRG00000016715	SNRNP48	99	90.208	ENSCAFG00020013203	SNRNP48	99	90.208	Canis_lupus_dingo
ENSTTRG00000016715	SNRNP48	100	88.529	ENSCHIG00000015216	SNRNP48	100	89.412	Capra_hircus
ENSTTRG00000016715	SNRNP48	100	88.496	ENSTSYG00000000698	SNRNP48	100	88.496	Carlito_syrichta
ENSTTRG00000016715	SNRNP48	91	83.117	ENSCAPG00000006768	SNRNP48	100	82.085	Cavia_aperea
ENSTTRG00000016715	SNRNP48	100	86.431	ENSCPOG00000007910	SNRNP48	100	86.431	Cavia_porcellus
ENSTTRG00000016715	SNRNP48	100	89.086	ENSCCAG00000035652	SNRNP48	100	89.086	Cebus_capucinus
ENSTTRG00000016715	SNRNP48	100	89.676	ENSCATG00000033947	SNRNP48	100	89.676	Cercocebus_atys
ENSTTRG00000016715	SNRNP48	100	85.841	ENSCLAG00000003765	SNRNP48	100	85.841	Chinchilla_lanigera
ENSTTRG00000016715	SNRNP48	100	90.265	ENSCSAG00000007409	SNRNP48	100	90.265	Chlorocebus_sabaeus
ENSTTRG00000016715	SNRNP48	85	66.225	ENSCPBG00000019146	SNRNP48	90	66.780	Chrysemys_picta_bellii
ENSTTRG00000016715	SNRNP48	94	30.368	ENSCING00000004121	-	87	30.612	Ciona_intestinalis
ENSTTRG00000016715	SNRNP48	100	90.265	ENSCANG00000030017	SNRNP48	100	90.265	Colobus_angolensis_palliatus
ENSTTRG00000016715	SNRNP48	100	86.136	ENSCGRG00001001076	-	100	86.136	Cricetulus_griseus_chok1gshd
ENSTTRG00000016715	SNRNP48	99	67.463	ENSCGRG00001008805	-	95	66.567	Cricetulus_griseus_chok1gshd
ENSTTRG00000016715	SNRNP48	100	86.136	ENSCGRG00000007781	Snrnp48	100	86.136	Cricetulus_griseus_crigri
ENSTTRG00000016715	SNRNP48	74	48.235	ENSCSEG00000000722	snrnp48	67	48.361	Cynoglossus_semilaevis
ENSTTRG00000016715	SNRNP48	93	44.785	ENSCVAG00000019829	snrnp48	89	41.311	Cyprinodon_variegatus
ENSTTRG00000016715	SNRNP48	81	44.523	ENSDARG00000039989	snrnp48	80	44.964	Danio_rerio
ENSTTRG00000016715	SNRNP48	99	90.746	ENSDNOG00000014978	SNRNP48	99	90.746	Dasypus_novemcinctus
ENSTTRG00000016715	SNRNP48	99	85.251	ENSDORG00000015140	Snrnp48	100	84.412	Dipodomys_ordii
ENSTTRG00000016715	SNRNP48	99	92.012	ENSEASG00005012021	SNRNP48	100	91.740	Equus_asinus_asinus
ENSTTRG00000016715	SNRNP48	100	92.625	ENSECAG00000026937	SNRNP48	100	92.625	Equus_caballus
ENSTTRG00000016715	SNRNP48	100	68.824	ENSEEUG00000015437	SNRNP48	99	68.824	Erinaceus_europaeus
ENSTTRG00000016715	SNRNP48	87	47.869	ENSELUG00000009766	snrnp48	75	48.352	Esox_lucius
ENSTTRG00000016715	SNRNP48	100	92.330	ENSFCAG00000018853	SNRNP48	100	92.330	Felis_catus
ENSTTRG00000016715	SNRNP48	83	65.753	ENSFALG00000007797	SNRNP48	92	66.090	Ficedula_albicollis
ENSTTRG00000016715	SNRNP48	100	84.956	ENSFDAG00000009231	SNRNP48	100	84.956	Fukomys_damarensis
ENSTTRG00000016715	SNRNP48	59	53.960	ENSFHEG00000014647	snrnp48	97	45.638	Fundulus_heteroclitus
ENSTTRG00000016715	SNRNP48	72	48.178	ENSGMOG00000018599	-	95	42.308	Gadus_morhua
ENSTTRG00000016715	SNRNP48	82	63.636	ENSGALG00000013005	SNRNP48	90	66.917	Gallus_gallus
ENSTTRG00000016715	SNRNP48	73	48.617	ENSGAFG00000021639	snrnp48	85	42.900	Gambusia_affinis
ENSTTRG00000016715	SNRNP48	72	51.220	ENSGACG00000017756	-	95	42.733	Gasterosteus_aculeatus
ENSTTRG00000016715	SNRNP48	84	65.333	ENSGAGG00000000865	SNRNP48	96	65.763	Gopherus_agassizii
ENSTTRG00000016715	SNRNP48	100	90.265	ENSGGOG00000013220	SNRNP48	100	90.265	Gorilla_gorilla
ENSTTRG00000016715	SNRNP48	98	43.440	ENSHBUG00000017066	snrnp48	91	42.183	Haplochromis_burtoni
ENSTTRG00000016715	SNRNP48	99	86.686	ENSHGLG00000015241	SNRNP48	100	86.431	Heterocephalus_glaber_female
ENSTTRG00000016715	SNRNP48	99	86.686	ENSHGLG00100010027	SNRNP48	100	86.431	Heterocephalus_glaber_male
ENSTTRG00000016715	SNRNP48	71	46.914	ENSHCOG00000014066	snrnp48	91	41.641	Hippocampus_comes
ENSTTRG00000016715	SNRNP48	100	90.265	ENSSTOG00000014635	SNRNP48	100	90.265	Ictidomys_tridecemlineatus
ENSTTRG00000016715	SNRNP48	100	82.891	ENSJJAG00000011495	Snrnp48	100	82.891	Jaculus_jaculus
ENSTTRG00000016715	SNRNP48	92	43.631	ENSKMAG00000016514	snrnp48	91	42.727	Kryptolebias_marmoratus
ENSTTRG00000016715	SNRNP48	76	48.649	ENSLBEG00000026249	snrnp48	91	43.620	Labrus_bergylta
ENSTTRG00000016715	SNRNP48	96	52.584	ENSLACG00000003958	SNRNP48	96	51.045	Latimeria_chalumnae
ENSTTRG00000016715	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	92	49.080	Lepisosteus_oculatus
ENSTTRG00000016715	SNRNP48	100	87.316	ENSLAFG00000011152	SNRNP48	100	87.316	Loxodonta_africana
ENSTTRG00000016715	SNRNP48	100	90.560	ENSMFAG00000045216	SNRNP48	100	90.560	Macaca_fascicularis
ENSTTRG00000016715	SNRNP48	100	90.560	ENSMMUG00000014785	SNRNP48	100	90.560	Macaca_mulatta
ENSTTRG00000016715	SNRNP48	100	90.560	ENSMNEG00000042269	SNRNP48	100	90.560	Macaca_nemestrina
ENSTTRG00000016715	SNRNP48	100	90.560	ENSMLEG00000034004	SNRNP48	100	90.560	Mandrillus_leucophaeus
ENSTTRG00000016715	SNRNP48	76	48.462	ENSMAMG00000018673	snrnp48	69	48.519	Mastacembelus_armatus
ENSTTRG00000016715	SNRNP48	83	64.726	ENSMGAG00000006037	SNRNP48	99	64.726	Meleagris_gallopavo
ENSTTRG00000016715	SNRNP48	100	86.726	ENSMAUG00000011944	Snrnp48	100	86.726	Mesocricetus_auratus
ENSTTRG00000016715	SNRNP48	100	88.791	ENSMICG00000012497	SNRNP48	100	88.791	Microcebus_murinus
ENSTTRG00000016715	SNRNP48	100	87.316	ENSMOCG00000015555	Snrnp48	100	87.316	Microtus_ochrogaster
ENSTTRG00000016715	SNRNP48	54	53.226	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSTTRG00000016715	SNRNP48	98	70.349	ENSMODG00000009996	SNRNP48	93	70.349	Monodelphis_domestica
ENSTTRG00000016715	SNRNP48	81	48.551	ENSMALG00000005725	snrnp48	91	44.172	Monopterus_albus
ENSTTRG00000016715	SNRNP48	100	86.136	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.136	Mus_caroli
ENSTTRG00000016715	SNRNP48	100	86.431	ENSMUSG00000021431	Snrnp48	100	86.431	Mus_musculus
ENSTTRG00000016715	SNRNP48	100	86.431	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSTTRG00000016715	SNRNP48	100	85.841	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.841	Mus_spretus
ENSTTRG00000016715	SNRNP48	99	84.911	ENSNGAG00000004849	Snrnp48	99	84.911	Nannospalax_galili
ENSTTRG00000016715	SNRNP48	76	47.308	ENSNBRG00000012127	snrnp48	91	42.012	Neolamprologus_brichardi
ENSTTRG00000016715	SNRNP48	100	90.560	ENSNLEG00000011667	SNRNP48	100	90.560	Nomascus_leucogenys
ENSTTRG00000016715	SNRNP48	95	75.851	ENSOPRG00000015471	SNRNP48	100	75.851	Ochotona_princeps
ENSTTRG00000016715	SNRNP48	96	44.277	ENSONIG00000001520	snrnp48	90	43.030	Oreochromis_niloticus
ENSTTRG00000016715	SNRNP48	57	62.981	ENSOANG00000019888	-	94	64.103	Ornithorhynchus_anatinus
ENSTTRG00000016715	SNRNP48	84	88.112	ENSOCUG00000005168	SNRNP48	100	87.829	Oryctolagus_cuniculus
ENSTTRG00000016715	SNRNP48	88	46.906	ENSORLG00000015654	snrnp48	91	45.289	Oryzias_latipes
ENSTTRG00000016715	SNRNP48	88	46.254	ENSORLG00020015976	snrnp48	78	44.681	Oryzias_latipes_hni
ENSTTRG00000016715	SNRNP48	88	47.231	ENSORLG00015022379	snrnp48	78	45.427	Oryzias_latipes_hsok
ENSTTRG00000016715	SNRNP48	83	46.528	ENSOMEG00000022007	snrnp48	91	42.985	Oryzias_melastigma
ENSTTRG00000016715	SNRNP48	92	88.424	ENSOGAG00000005275	SNRNP48	92	89.180	Otolemur_garnettii
ENSTTRG00000016715	SNRNP48	85	89.895	ENSOARG00000017319	SNRNP48	99	89.753	Ovis_aries
ENSTTRG00000016715	SNRNP48	100	90.560	ENSPPAG00000032873	SNRNP48	100	90.560	Pan_paniscus
ENSTTRG00000016715	SNRNP48	100	92.625	ENSPPRG00000004283	SNRNP48	100	92.625	Panthera_pardus
ENSTTRG00000016715	SNRNP48	85	93.031	ENSPTIG00000013502	SNRNP48	99	93.640	Panthera_tigris_altaica
ENSTTRG00000016715	SNRNP48	100	90.560	ENSPTRG00000017703	SNRNP48	100	90.560	Pan_troglodytes
ENSTTRG00000016715	SNRNP48	100	90.560	ENSPANG00000000771	SNRNP48	100	90.560	Papio_anubis
ENSTTRG00000016715	SNRNP48	94	45.833	ENSPKIG00000013703	snrnp48	58	49.291	Paramormyrops_kingsleyae
ENSTTRG00000016715	SNRNP48	84	63.455	ENSPSIG00000002213	SNRNP48	92	63.481	Pelodiscus_sinensis
ENSTTRG00000016715	SNRNP48	76	46.512	ENSPMGG00000008120	snrnp48	85	47.521	Periophthalmus_magnuspinnatus
ENSTTRG00000016715	SNRNP48	100	87.021	ENSPEMG00000008872	Snrnp48	100	87.021	Peromyscus_maniculatus_bairdii
ENSTTRG00000016715	SNRNP48	73	50.403	ENSPFOG00000003578	snrnp48	85	44.479	Poecilia_formosa
ENSTTRG00000016715	SNRNP48	66	49.115	ENSPLAG00000002290	snrnp48	75	48.879	Poecilia_latipinna
ENSTTRG00000016715	SNRNP48	73	49.597	ENSPMEG00000018033	snrnp48	85	43.865	Poecilia_mexicana
ENSTTRG00000016715	SNRNP48	71	49.794	ENSPREG00000018541	snrnp48	92	43.713	Poecilia_reticulata
ENSTTRG00000016715	SNRNP48	100	89.086	ENSPPYG00000016209	SNRNP48	100	89.086	Pongo_abelii
ENSTTRG00000016715	SNRNP48	78	70.189	ENSPCAG00000011991	SNRNP48	99	70.189	Procavia_capensis
ENSTTRG00000016715	SNRNP48	100	91.150	ENSPVAG00000002854	SNRNP48	100	91.150	Pteropus_vampyrus
ENSTTRG00000016715	SNRNP48	76	48.077	ENSPNYG00000015399	snrnp48	84	47.037	Pundamilia_nyererei
ENSTTRG00000016715	SNRNP48	100	86.726	ENSRNOG00000013756	Snrnp48	100	86.726	Rattus_norvegicus
ENSTTRG00000016715	SNRNP48	91	90.323	ENSRBIG00000043856	SNRNP48	98	90.323	Rhinopithecus_bieti
ENSTTRG00000016715	SNRNP48	100	90.265	ENSRROG00000043229	SNRNP48	100	90.265	Rhinopithecus_roxellana
ENSTTRG00000016715	SNRNP48	100	90.265	ENSSBOG00000019486	SNRNP48	100	90.265	Saimiri_boliviensis_boliviensis
ENSTTRG00000016715	SNRNP48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSTTRG00000016715	SNRNP48	73	51.779	ENSSFOG00015006610	snrnp48	67	49.477	Scleropages_formosus
ENSTTRG00000016715	SNRNP48	87	46.465	ENSSDUG00000014953	snrnp48	91	43.491	Seriola_dumerili
ENSTTRG00000016715	SNRNP48	83	48.136	ENSSLDG00000005989	snrnp48	97	43.137	Seriola_lalandi_dorsalis
ENSTTRG00000016715	SNRNP48	84	65.436	ENSSPUG00000006257	SNRNP48	84	66.212	Sphenodon_punctatus
ENSTTRG00000016715	SNRNP48	71	48.980	ENSSPAG00000006454	snrnp48	91	43.333	Stegastes_partitus
ENSTTRG00000016715	SNRNP48	83	63.918	ENSTGUG00000007575	SNRNP48	92	64.236	Taeniopygia_guttata
ENSTTRG00000016715	SNRNP48	73	50.794	ENSTRUG00000007031	snrnp48	79	49.632	Takifugu_rubripes
ENSTTRG00000016715	SNRNP48	71	47.541	ENSTNIG00000012977	-	71	47.718	Tetraodon_nigroviridis
ENSTTRG00000016715	SNRNP48	100	71.386	ENSTBEG00000015620	SNRNP48	100	71.386	Tupaia_belangeri
ENSTTRG00000016715	SNRNP48	100	90.855	ENSUAMG00000003690	SNRNP48	100	89.971	Ursus_americanus
ENSTTRG00000016715	SNRNP48	85	88.850	ENSVPAG00000003557	SNRNP48	99	89.046	Vicugna_pacos
ENSTTRG00000016715	SNRNP48	99	90.208	ENSVVUG00000004996	SNRNP48	99	90.208	Vulpes_vulpes
ENSTTRG00000016715	SNRNP48	89	53.376	ENSXETG00000020447	snrnp48	99	51.282	Xenopus_tropicalis
ENSTTRG00000016715	SNRNP48	66	48.899	ENSXCOG00000004478	snrnp48	67	48.889	Xiphophorus_couchianus
ENSTTRG00000016715	SNRNP48	81	48.188	ENSXMAG00000013595	snrnp48	85	44.479	Xiphophorus_maculatus