EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTTRG00000016954 (Gene tree)
Gene ID: -
Gene Symbol: RC3H2
Alias: FLJ20301|FLJ20713|MNAB|RNF164
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Minus strand
Length: 38892 bases
Position: chrGeneScaffold_1875:63271-102162
Accession: 21461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000016072	zf-CCCH	PF00642.24	9.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000016954	RC3H2-201	3576	-	ENSTTRP00000016072	1191 (aa)	-	UPI00018B7815

Gene Model

Click here to download ENSTTRG00000016954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000016954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTTRG00000016954	RC3H2	81	61.248	ENSTTRG00000008572	RC3H1	86	62.549

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000016954	RC3H2	94	98.535	ENSG00000056586	RC3H2	95	99.338	Homo_sapiens
ENSTTRG00000016954	RC3H2	85	67.268	ENSAPOG00000002117	rc3h2	87	66.839	Acanthochromis_polyacanthus
ENSTTRG00000016954	RC3H2	94	99.201	ENSAMEG00000006498	RC3H2	94	99.201	Ailuropoda_melanoleuca
ENSTTRG00000016954	RC3H2	85	67.526	ENSAPEG00000007757	rc3h2	87	67.097	Amphiprion_percula
ENSTTRG00000016954	RC3H2	84	65.810	ENSATEG00000019414	rc3h2	86	65.380	Anabas_testudineus
ENSTTRG00000016954	RC3H2	94	92.410	ENSAPLG00000013920	RC3H2	94	92.410	Anas_platyrhynchos
ENSTTRG00000016954	RC3H2	94	98.402	ENSANAG00000030862	RC3H2	95	99.338	Aotus_nancymaae
ENSTTRG00000016954	RC3H2	84	65.947	ENSACLG00000023136	rc3h2	87	65.565	Astatotilapia_calliptera
ENSTTRG00000016954	RC3H2	74	63.926	ENSAMXG00000006778	rc3h2	81	64.436	Astyanax_mexicanus
ENSTTRG00000016954	RC3H2	94	99.334	ENSBTAG00000023867	RC3H2	99	99.334	Bos_taurus
ENSTTRG00000016954	RC3H2	94	98.402	ENSCJAG00000020050	RC3H2	95	99.338	Callithrix_jacchus
ENSTTRG00000016954	RC3H2	94	98.935	ENSCAFG00020015288	RC3H2	95	99.338	Canis_lupus_dingo
ENSTTRG00000016954	RC3H2	94	99.068	ENSCHIG00000019319	RC3H2	94	99.068	Capra_hircus
ENSTTRG00000016954	RC3H2	78	85.547	ENSCAPG00000017086	RC3H2	89	85.547	Cavia_aperea
ENSTTRG00000016954	RC3H2	94	98.535	ENSCPOG00000008511	RC3H2	94	98.535	Cavia_porcellus
ENSTTRG00000016954	RC3H2	94	98.269	ENSCCAG00000001404	RC3H2	95	99.338	Cebus_capucinus
ENSTTRG00000016954	RC3H2	94	98.668	ENSCATG00000036655	RC3H2	95	99.338	Cercocebus_atys
ENSTTRG00000016954	RC3H2	94	98.269	ENSCLAG00000013261	RC3H2	94	98.269	Chinchilla_lanigera
ENSTTRG00000016954	RC3H2	84	98.553	ENSCSAG00000013416	RC3H2	94	98.553	Chlorocebus_sabaeus
ENSTTRG00000016954	RC3H2	94	91.478	ENSCPBG00000009811	RC3H2	94	91.478	Chrysemys_picta_bellii
ENSTTRG00000016954	RC3H2	94	98.668	ENSCANG00000043140	RC3H2	95	99.338	Colobus_angolensis_palliatus
ENSTTRG00000016954	RC3H2	94	95.606	ENSCGRG00001010006	Rc3h2	94	94.674	Cricetulus_griseus_chok1gshd
ENSTTRG00000016954	RC3H2	84	95.606	ENSCGRG00000009255	Rc3h2	94	94.674	Cricetulus_griseus_crigri
ENSTTRG00000016954	RC3H2	84	65.179	ENSCSEG00000017460	rc3h2	90	66.021	Cynoglossus_semilaevis
ENSTTRG00000016954	RC3H2	84	66.711	ENSCVAG00000012202	rc3h2	86	66.225	Cyprinodon_variegatus
ENSTTRG00000016954	RC3H2	84	64.533	ENSDARG00000063050	rc3h2	89	64.533	Danio_rerio
ENSTTRG00000016954	RC3H2	94	98.136	ENSDNOG00000014557	RC3H2	94	98.136	Dasypus_novemcinctus
ENSTTRG00000016954	RC3H2	94	97.337	ENSDORG00000006398	Rc3h2	94	97.337	Dipodomys_ordii
ENSTTRG00000016954	RC3H2	94	97.587	ENSEASG00005020897	RC3H2	94	97.587	Equus_asinus_asinus
ENSTTRG00000016954	RC3H2	94	99.201	ENSECAG00000022176	RC3H2	94	99.201	Equus_caballus
ENSTTRG00000016954	RC3H2	84	67.104	ENSELUG00000006105	rc3h2	87	66.404	Esox_lucius
ENSTTRG00000016954	RC3H2	94	98.935	ENSFCAG00000007375	RC3H2	99	98.935	Felis_catus
ENSTTRG00000016954	RC3H2	94	92.676	ENSFALG00000002011	RC3H2	94	92.676	Ficedula_albicollis
ENSTTRG00000016954	RC3H2	94	98.668	ENSFDAG00000012477	RC3H2	94	98.668	Fukomys_damarensis
ENSTTRG00000016954	RC3H2	85	66.975	ENSFHEG00000012272	rc3h2	86	66.799	Fundulus_heteroclitus
ENSTTRG00000016954	RC3H2	58	57.500	ENSGMOG00000016709	-	90	56.637	Gadus_morhua
ENSTTRG00000016954	RC3H2	94	92.410	ENSGALG00000001253	RC3H2	94	92.410	Gallus_gallus
ENSTTRG00000016954	RC3H2	85	66.053	ENSGAFG00000007679	rc3h2	90	65.613	Gambusia_affinis
ENSTTRG00000016954	RC3H2	64	65.674	ENSGACG00000017369	rc3h2	100	87.104	Gasterosteus_aculeatus
ENSTTRG00000016954	RC3H2	94	92.144	ENSGAGG00000018295	RC3H2	94	92.144	Gopherus_agassizii
ENSTTRG00000016954	RC3H2	94	98.668	ENSGGOG00000017062	RC3H2	95	99.338	Gorilla_gorilla
ENSTTRG00000016954	RC3H2	84	67.183	ENSHBUG00000003976	rc3h2	87	66.796	Haplochromis_burtoni
ENSTTRG00000016954	RC3H2	94	98.271	ENSHGLG00100018015	RC3H2	94	98.271	Heterocephalus_glaber_male
ENSTTRG00000016954	RC3H2	73	64.529	ENSHCOG00000003006	rc3h2	80	64.220	Hippocampus_comes
ENSTTRG00000016954	RC3H2	74	61.886	ENSIPUG00000021433	rc3h2	83	62.701	Ictalurus_punctatus
ENSTTRG00000016954	RC3H2	94	98.935	ENSSTOG00000010655	RC3H2	94	98.935	Ictidomys_tridecemlineatus
ENSTTRG00000016954	RC3H2	94	97.736	ENSJJAG00000022376	Rc3h2	94	97.736	Jaculus_jaculus
ENSTTRG00000016954	RC3H2	84	66.449	ENSKMAG00000010936	rc3h2	87	66.013	Kryptolebias_marmoratus
ENSTTRG00000016954	RC3H2	86	70.321	ENSLOCG00000002894	rc3h2	87	70.968	Lepisosteus_oculatus
ENSTTRG00000016954	RC3H2	94	97.736	ENSLAFG00000003521	RC3H2	94	97.736	Loxodonta_africana
ENSTTRG00000016954	RC3H2	94	98.668	ENSMFAG00000035621	RC3H2	99	96.247	Macaca_fascicularis
ENSTTRG00000016954	RC3H2	94	98.668	ENSMMUG00000021134	RC3H2	95	99.338	Macaca_mulatta
ENSTTRG00000016954	RC3H2	94	98.668	ENSMNEG00000031599	RC3H2	94	98.668	Macaca_nemestrina
ENSTTRG00000016954	RC3H2	90	98.668	ENSMLEG00000033809	RC3H2	95	99.338	Mandrillus_leucophaeus
ENSTTRG00000016954	RC3H2	84	66.667	ENSMZEG00005017019	rc3h2	87	66.278	Maylandia_zebra
ENSTTRG00000016954	RC3H2	94	92.165	ENSMGAG00000007984	RC3H2	94	92.165	Meleagris_gallopavo
ENSTTRG00000016954	RC3H2	84	89.812	ENSMAUG00000003117	Rc3h2	94	89.812	Mesocricetus_auratus
ENSTTRG00000016954	RC3H2	94	98.003	ENSMICG00000003227	RC3H2	95	99.117	Microcebus_murinus
ENSTTRG00000016954	RC3H2	94	96.405	ENSMOCG00000009592	Rc3h2	94	96.405	Microtus_ochrogaster
ENSTTRG00000016954	RC3H2	63	87.305	ENSMMOG00000021305	rc3h2	82	87.305	Mola_mola
ENSTTRG00000016954	RC3H2	88	95.878	ENSMODG00000019725	RC3H2	74	95.878	Monodelphis_domestica
ENSTTRG00000016954	RC3H2	94	96.671	MGP_CAROLIEiJ_G0023516	Rc3h2	95	98.896	Mus_caroli
ENSTTRG00000016954	RC3H2	94	96.405	ENSMUSG00000075376	Rc3h2	95	98.896	Mus_musculus
ENSTTRG00000016954	RC3H2	94	96.671	MGP_PahariEiJ_G0024969	Rc3h2	95	98.896	Mus_pahari
ENSTTRG00000016954	RC3H2	94	96.804	MGP_SPRETEiJ_G0024436	Rc3h2	95	98.896	Mus_spretus
ENSTTRG00000016954	RC3H2	94	98.668	ENSMPUG00000014141	RC3H2	94	98.668	Mustela_putorius_furo
ENSTTRG00000016954	RC3H2	94	98.003	ENSMLUG00000013992	RC3H2	94	98.003	Myotis_lucifugus
ENSTTRG00000016954	RC3H2	84	67.054	ENSNBRG00000009276	rc3h2	87	66.667	Neolamprologus_brichardi
ENSTTRG00000016954	RC3H2	94	96.937	ENSNLEG00000017204	RC3H2	95	99.338	Nomascus_leucogenys
ENSTTRG00000016954	RC3H2	54	99.209	ENSMEUG00000001299	-	57	99.209	Notamacropus_eugenii
ENSTTRG00000016954	RC3H2	76	93.878	ENSOPRG00000000135	RC3H2	87	93.878	Ochotona_princeps
ENSTTRG00000016954	RC3H2	84	68.241	ENSONIG00000003945	rc3h2	94	68.241	Oreochromis_niloticus
ENSTTRG00000016954	RC3H2	85	95.340	ENSOANG00000008194	RC3H2	94	95.340	Ornithorhynchus_anatinus
ENSTTRG00000016954	RC3H2	94	98.935	ENSOCUG00000008804	RC3H2	94	98.935	Oryctolagus_cuniculus
ENSTTRG00000016954	RC3H2	84	66.970	ENSORLG00000010018	rc3h2	85	66.710	Oryzias_latipes
ENSTTRG00000016954	RC3H2	84	67.188	ENSORLG00020013257	rc3h2	85	66.536	Oryzias_latipes_hni
ENSTTRG00000016954	RC3H2	84	67.448	ENSORLG00015001525	rc3h2	85	67.188	Oryzias_latipes_hsok
ENSTTRG00000016954	RC3H2	85	66.667	ENSOMEG00000023540	rc3h2	86	66.192	Oryzias_melastigma
ENSTTRG00000016954	RC3H2	94	97.870	ENSOGAG00000010678	RC3H2	94	97.870	Otolemur_garnettii
ENSTTRG00000016954	RC3H2	94	99.201	ENSOARG00000013965	RC3H2	94	99.201	Ovis_aries
ENSTTRG00000016954	RC3H2	94	98.535	ENSPPAG00000036013	RC3H2	95	99.117	Pan_paniscus
ENSTTRG00000016954	RC3H2	94	98.935	ENSPPRG00000008698	RC3H2	94	98.935	Panthera_pardus
ENSTTRG00000016954	RC3H2	94	98.935	ENSPTIG00000014257	RC3H2	94	98.935	Panthera_tigris_altaica
ENSTTRG00000016954	RC3H2	94	98.535	ENSPTRG00000021339	RC3H2	95	99.117	Pan_troglodytes
ENSTTRG00000016954	RC3H2	94	96.005	ENSPANG00000025840	RC3H2	94	96.005	Papio_anubis
ENSTTRG00000016954	RC3H2	86	71.448	ENSPKIG00000021910	rc3h2	84	70.690	Paramormyrops_kingsleyae
ENSTTRG00000016954	RC3H2	94	91.877	ENSPSIG00000005393	RC3H2	94	91.877	Pelodiscus_sinensis
ENSTTRG00000016954	RC3H2	69	86.199	ENSPMGG00000023963	rc3h2	94	86.682	Periophthalmus_magnuspinnatus
ENSTTRG00000016954	RC3H2	94	96.005	ENSPEMG00000023441	Rc3h2	94	96.005	Peromyscus_maniculatus_bairdii
ENSTTRG00000016954	RC3H2	94	95.479	ENSPCIG00000025559	RC3H2	99	95.479	Phascolarctos_cinereus
ENSTTRG00000016954	RC3H2	84	65.309	ENSPFOG00000019699	rc3h2	92	63.990	Poecilia_formosa
ENSTTRG00000016954	RC3H2	74	63.221	ENSPLAG00000005799	rc3h2	90	62.983	Poecilia_latipinna
ENSTTRG00000016954	RC3H2	85	65.309	ENSPMEG00000014187	rc3h2	86	65.132	Poecilia_mexicana
ENSTTRG00000016954	RC3H2	85	65.046	ENSPREG00000008979	rc3h2	86	64.868	Poecilia_reticulata
ENSTTRG00000016954	RC3H2	81	92.493	ENSPCAG00000010154	RC3H2	81	92.493	Procavia_capensis
ENSTTRG00000016954	RC3H2	84	65.947	ENSPNYG00000012063	rc3h2	86	65.565	Pundamilia_nyererei
ENSTTRG00000016954	RC3H2	74	65.600	ENSPNAG00000017502	rc3h2	81	65.600	Pygocentrus_nattereri
ENSTTRG00000016954	RC3H2	94	96.671	ENSRNOG00000009196	Rc3h2	94	96.671	Rattus_norvegicus
ENSTTRG00000016954	RC3H2	90	98.535	ENSRBIG00000032579	RC3H2	95	99.338	Rhinopithecus_bieti
ENSTTRG00000016954	RC3H2	94	98.535	ENSRROG00000043784	RC3H2	95	99.338	Rhinopithecus_roxellana
ENSTTRG00000016954	RC3H2	94	98.269	ENSSBOG00000029100	RC3H2	99	98.269	Saimiri_boliviensis_boliviensis
ENSTTRG00000016954	RC3H2	94	96.011	ENSSHAG00000007498	RC3H2	94	96.011	Sarcophilus_harrisii
ENSTTRG00000016954	RC3H2	84	67.102	ENSSMAG00000020048	rc3h2	87	66.928	Scophthalmus_maximus
ENSTTRG00000016954	RC3H2	85	67.270	ENSSDUG00000016022	rc3h2	87	67.228	Seriola_dumerili
ENSTTRG00000016954	RC3H2	85	67.270	ENSSLDG00000016070	rc3h2	87	67.228	Seriola_lalandi_dorsalis
ENSTTRG00000016954	RC3H2	94	97.470	ENSSARG00000012329	RC3H2	94	97.470	Sorex_araneus
ENSTTRG00000016954	RC3H2	94	90.546	ENSSPUG00000001457	RC3H2	94	90.546	Sphenodon_punctatus
ENSTTRG00000016954	RC3H2	85	67.053	ENSSPAG00000005233	rc3h2	87	66.667	Stegastes_partitus
ENSTTRG00000016954	RC3H2	94	98.668	ENSSSCG00000005575	RC3H2	94	98.668	Sus_scrofa
ENSTTRG00000016954	RC3H2	94	92.676	ENSTGUG00000006889	-	94	92.676	Taeniopygia_guttata
ENSTTRG00000016954	RC3H2	74	64.286	ENSTNIG00000004942	rc3h2	92	64.021	Tetraodon_nigroviridis
ENSTTRG00000016954	RC3H2	69	100.000	ENSTBEG00000009622	RC3H2	79	100.000	Tupaia_belangeri
ENSTTRG00000016954	RC3H2	94	99.201	ENSUAMG00000015355	RC3H2	99	99.201	Ursus_americanus
ENSTTRG00000016954	RC3H2	94	99.201	ENSUMAG00000003161	RC3H2	95	99.338	Ursus_maritimus
ENSTTRG00000016954	RC3H2	94	98.668	ENSVPAG00000005994	RC3H2	94	98.668	Vicugna_pacos
ENSTTRG00000016954	RC3H2	94	98.802	ENSVVUG00000009519	RC3H2	94	98.802	Vulpes_vulpes
ENSTTRG00000016954	RC3H2	74	63.672	ENSXCOG00000005002	rc3h2	94	87.075	Xiphophorus_couchianus
ENSTTRG00000016954	RC3H2	84	65.234	ENSXMAG00000001724	rc3h2	85	64.928	Xiphophorus_maculatus