EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSTTRG00000017088 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Tursiops_truncatus
Status
putative
Strand
Minus strand
Length
5380 bases
Position
chrGeneScaffold_2992:35034-40413
Accession
17042
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTTRP00000016199RRM_1PF00076.225.6e-4312
ENSTTRP00000016199RRM_1PF00076.225.6e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTTRT00000017088PUF60-2011548-ENSTTRP00000016199515 (aa)-UPI00018B53D0
Gene Model
Click here to download ENSTTRG00000017088's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000017088's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTTRG00000017088PUF6010098.643ENSG00000179950PUF6010098.643Homo_sapiens
ENSTTRG00000017088PUF6010085.221ENSAPOG00000001713puf60b9885.029Acanthochromis_polyacanthus
ENSTTRG00000017088PUF6010097.476ENSAMEG00000006406PUF609297.476Ailuropoda_melanoleuca
ENSTTRG00000017088PUF6010084.453ENSACIG00000021705puf60b10084.261Amphilophus_citrinellus
ENSTTRG00000017088PUF6010076.775ENSACIG00000003263-9975.816Amphilophus_citrinellus
ENSTTRG00000017088PUF6010085.221ENSAOCG00000005395puf60b10085.029Amphiprion_ocellaris
ENSTTRG00000017088PUF6010081.346ENSAOCG00000015558-9780.732Amphiprion_ocellaris
ENSTTRG00000017088PUF6010071.977ENSAPEG00000001836-9972.243Amphiprion_percula
ENSTTRG00000017088PUF6010079.846ENSAPEG00000011923puf60b9779.655Amphiprion_percula
ENSTTRG00000017088PUF6010080.925ENSATEG00000006303-9880.695Anabas_testudineus
ENSTTRG00000017088PUF6010085.029ENSATEG00000001730puf60b9884.837Anabas_testudineus
ENSTTRG00000017088PUF6010097.868ENSAPLG00000010150PUF609997.868Anas_platyrhynchos
ENSTTRG00000017088PUF6010096.339ENSACAG00000001645PUF609696.339Anolis_carolinensis
ENSTTRG00000017088PUF6010098.643ENSANAG00000018626PUF6010098.643Aotus_nancymaae
ENSTTRG00000017088PUF6010084.453ENSACLG00000004462puf60b10084.261Astatotilapia_calliptera
ENSTTRG00000017088PUF6010083.992ENSAMXG00000036570puf60a10079.818Astyanax_mexicanus
ENSTTRG00000017088PUF6010075.514ENSAMXG00000041030puf60b10074.672Astyanax_mexicanus
ENSTTRG00000017088PUF6010099.031ENSBTAG00000037493PUF609899.031Bos_taurus
ENSTTRG00000017088PUF608249.838WBGene00004389rnp-67551.812Caenorhabditis_elegans
ENSTTRG00000017088PUF6010098.837ENSCJAG00000021485PUF609798.837Callithrix_jacchus
ENSTTRG00000017088PUF6010098.643ENSCAFG00000001400PUF609298.643Canis_familiaris
ENSTTRG00000017088PUF6010099.031ENSCAFG00020018754PUF609799.031Canis_lupus_dingo
ENSTTRG00000017088PUF6010099.031ENSCHIG00000001618PUF608699.031Capra_hircus
ENSTTRG00000017088PUF6010099.031ENSTSYG00000011912PUF6010099.031Carlito_syrichta
ENSTTRG00000017088PUF6010092.692ENSCPOG00000014613PUF609392.500Cavia_porcellus
ENSTTRG00000017088PUF6010098.643ENSCCAG00000007744PUF609798.643Cebus_capucinus
ENSTTRG00000017088PUF6010098.643ENSCATG00000035405PUF609798.643Cercocebus_atys
ENSTTRG00000017088PUF6010099.031ENSCLAG00000009154PUF609199.031Chinchilla_lanigera
ENSTTRG00000017088PUF6010098.643ENSCSAG00000008878PUF6010098.643Chlorocebus_sabaeus
ENSTTRG00000017088PUF6010097.868ENSCPBG00000005595PUF609797.868Chrysemys_picta_bellii
ENSTTRG00000017088PUF606458.284ENSCING00000002156-8757.567Ciona_intestinalis
ENSTTRG00000017088PUF609848.375ENSCING00000008436-9548.743Ciona_intestinalis
ENSTTRG00000017088PUF609853.524ENSCSAVG00000001385-9953.565Ciona_savignyi
ENSTTRG00000017088PUF609749.505ENSCSAVG00000004765-9749.203Ciona_savignyi
ENSTTRG00000017088PUF608198.561ENSCANG00000041843PUF6010098.561Colobus_angolensis_palliatus
ENSTTRG00000017088PUF6010098.450ENSCGRG00001017442Puf609198.450Cricetulus_griseus_chok1gshd
ENSTTRG00000017088PUF6010098.450ENSCGRG00000003717Puf609298.450Cricetulus_griseus_crigri
ENSTTRG00000017088PUF6010071.128ENSCSEG00000014845-8973.563Cynoglossus_semilaevis
ENSTTRG00000017088PUF6010084.453ENSCSEG00000019887puf60b9183.877Cynoglossus_semilaevis
ENSTTRG00000017088PUF6010083.493ENSCVAG00000009386puf60b10084.453Cyprinodon_variegatus
ENSTTRG00000017088PUF609179.158ENSCVAG00000001560-9878.224Cyprinodon_variegatus
ENSTTRG00000017088PUF6010085.985ENSDARG00000032175puf60a9994.043Danio_rerio
ENSTTRG00000017088PUF6010077.632ENSDARG00000001241puf60b9996.032Danio_rerio
ENSTTRG00000017088PUF609883.432ENSDNOG00000043278PUF609083.432Dasypus_novemcinctus
ENSTTRG00000017088PUF6010098.837ENSDORG00000004585Puf609498.837Dipodomys_ordii
ENSTTRG00000017088PUF609748.193FBgn0028577hfp9945.196Drosophila_melanogaster
ENSTTRG00000017088PUF6010061.499ENSEBUG00000014291puf60b8463.527Eptatretus_burgeri
ENSTTRG00000017088PUF609868.390ENSEBUG00000005470-8866.863Eptatretus_burgeri
ENSTTRG00000017088PUF6010099.031ENSEASG00005009695PUF609799.031Equus_asinus_asinus
ENSTTRG00000017088PUF6010099.031ENSECAG00000024681PUF609699.031Equus_caballus
ENSTTRG00000017088PUF6010083.939ENSELUG00000018443-9883.939Esox_lucius
ENSTTRG00000017088PUF6010083.269ENSELUG00000006507puf60b9978.755Esox_lucius
ENSTTRG00000017088PUF6010098.643ENSFCAG00000001045PUF6010098.643Felis_catus
ENSTTRG00000017088PUF6010084.109ENSFALG00000001136PUF609785.687Ficedula_albicollis
ENSTTRG00000017088PUF6010098.837ENSFDAG00000017177PUF609198.837Fukomys_damarensis
ENSTTRG00000017088PUF6010084.069ENSFHEG00000020046puf60b10084.837Fundulus_heteroclitus
ENSTTRG00000017088PUF609678.514ENSFHEG00000021687PUF6010078.893Fundulus_heteroclitus
ENSTTRG00000017088PUF6010070.913ENSGMOG00000006392puf60b9969.962Gadus_morhua
ENSTTRG00000017088PUF606797.384ENSGALG00000039901PUF609497.384Gallus_gallus
ENSTTRG00000017088PUF6010083.493ENSGAFG00000021040puf60b10084.261Gambusia_affinis
ENSTTRG00000017088PUF6010078.764ENSGAFG00000004334-9977.563Gambusia_affinis
ENSTTRG00000017088PUF6010072.849ENSGACG00000004717puf60b9771.977Gasterosteus_aculeatus
ENSTTRG00000017088PUF6010070.736ENSGACG00000001484-10069.364Gasterosteus_aculeatus
ENSTTRG00000017088PUF6010097.868ENSGAGG00000013289PUF609197.868Gopherus_agassizii
ENSTTRG00000017088PUF6010098.643ENSGGOG00000004646PUF609798.643Gorilla_gorilla
ENSTTRG00000017088PUF6010084.453ENSHBUG00000015118puf60b10084.261Haplochromis_burtoni
ENSTTRG00000017088PUF6010081.958ENSHBUG00000009634-9880.577Haplochromis_burtoni
ENSTTRG00000017088PUF6010098.837ENSHGLG00000006111PUF609198.837Heterocephalus_glaber_female
ENSTTRG00000017088PUF6010098.837ENSHGLG00100012362PUF609198.837Heterocephalus_glaber_male
ENSTTRG00000017088PUF6010081.331ENSHCOG00000015541puf60b9980.185Hippocampus_comes
ENSTTRG00000017088PUF609866.732ENSHCOG00000000378-9964.030Hippocampus_comes
ENSTTRG00000017088PUF6010077.820ENSIPUG00000004660puf60b9977.401Ictalurus_punctatus
ENSTTRG00000017088PUF6010081.474ENSIPUG00000002453puf60a9981.664Ictalurus_punctatus
ENSTTRG00000017088PUF6010099.031ENSSTOG00000025037PUF609299.031Ictidomys_tridecemlineatus
ENSTTRG00000017088PUF6010098.643ENSJJAG00000001076Puf609298.643Jaculus_jaculus
ENSTTRG00000017088PUF6010084.069ENSKMAG00000016745puf60b10084.837Kryptolebias_marmoratus
ENSTTRG00000017088PUF6010077.083ENSKMAG00000010106-10075.518Kryptolebias_marmoratus
ENSTTRG00000017088PUF6010083.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSTTRG00000017088PUF607089.256ENSLACG00000005456PUF609988.705Latimeria_chalumnae
ENSTTRG00000017088PUF6010090.366ENSLOCG00000010106puf60b9889.017Lepisosteus_oculatus
ENSTTRG00000017088PUF6010097.674ENSLAFG00000022929PUF609397.674Loxodonta_africana
ENSTTRG00000017088PUF6010098.643ENSMFAG00000043373PUF609898.643Macaca_fascicularis
ENSTTRG00000017088PUF6010098.643ENSMMUG00000013558PUF609798.643Macaca_mulatta
ENSTTRG00000017088PUF6010098.643ENSMNEG00000031099PUF609798.643Macaca_nemestrina
ENSTTRG00000017088PUF6010098.643ENSMLEG00000040009PUF6010098.643Mandrillus_leucophaeus
ENSTTRG00000017088PUF6010084.837ENSMAMG00000010394puf60b10081.869Mastacembelus_armatus
ENSTTRG00000017088PUF6010082.534ENSMAMG00000019476-9881.154Mastacembelus_armatus
ENSTTRG00000017088PUF6010084.453ENSMZEG00005018515puf60b10084.261Maylandia_zebra
ENSTTRG00000017088PUF6010082.150ENSMZEG00005019425-9880.769Maylandia_zebra
ENSTTRG00000017088PUF6010097.868ENSMGAG00000013070PUF609797.868Meleagris_gallopavo
ENSTTRG00000017088PUF607098.333ENSMAUG00000014267-8898.333Mesocricetus_auratus
ENSTTRG00000017088PUF609679.920ENSMAUG00000018549-9579.920Mesocricetus_auratus
ENSTTRG00000017088PUF6010099.031ENSMICG00000012226PUF609899.031Microcebus_murinus
ENSTTRG00000017088PUF6010098.643ENSMOCG00000018780Puf609298.643Microtus_ochrogaster
ENSTTRG00000017088PUF6010084.645ENSMMOG00000004217puf60b10084.453Mola_mola
ENSTTRG00000017088PUF6010074.031ENSMMOG00000018059-9978.261Mola_mola
ENSTTRG00000017088PUF6010098.450ENSMODG00000009161PUF609398.450Monodelphis_domestica
ENSTTRG00000017088PUF6010081.346ENSMALG00000000200-9880.115Monopterus_albus
ENSTTRG00000017088PUF6010078.269ENSMALG00000006797puf60b9778.269Monopterus_albus
ENSTTRG00000017088PUF6010098.450MGP_CAROLIEiJ_G0019910Puf609198.450Mus_caroli
ENSTTRG00000017088PUF6010098.450ENSMUSG00000002524Puf609198.450Mus_musculus
ENSTTRG00000017088PUF6010098.450MGP_PahariEiJ_G0019920Puf609198.450Mus_pahari
ENSTTRG00000017088PUF6010098.450MGP_SPRETEiJ_G0020812Puf609198.450Mus_spretus
ENSTTRG00000017088PUF6010099.031ENSMPUG00000008137PUF609199.031Mustela_putorius_furo
ENSTTRG00000017088PUF6010090.504ENSMLUG00000013032-9790.891Myotis_lucifugus
ENSTTRG00000017088PUF6010098.062ENSMLUG00000000238-9298.062Myotis_lucifugus
ENSTTRG00000017088PUF6010098.643ENSNGAG00000000712Puf6010098.643Nannospalax_galili
ENSTTRG00000017088PUF6010082.342ENSNBRG00000017223-9880.925Neolamprologus_brichardi
ENSTTRG00000017088PUF608380.995ENSNBRG00000013047puf60b9782.824Neolamprologus_brichardi
ENSTTRG00000017088PUF6010098.643ENSNLEG00000002156PUF609798.643Nomascus_leucogenys
ENSTTRG00000017088PUF607598.635ENSOPRG00000002147PUF607598.635Ochotona_princeps
ENSTTRG00000017088PUF6072100.000ENSODEG00000014024-89100.000Octodon_degus
ENSTTRG00000017088PUF609873.715ENSODEG00000015513-9672.481Octodon_degus
ENSTTRG00000017088PUF6010082.342ENSONIG00000014030-9780.962Oreochromis_niloticus
ENSTTRG00000017088PUF6010084.453ENSONIG00000006247puf60b9784.261Oreochromis_niloticus
ENSTTRG00000017088PUF609778.373ENSOANG00000006962PUF609778.175Ornithorhynchus_anatinus
ENSTTRG00000017088PUF609978.030ENSORLG00000028655-9977.905Oryzias_latipes
ENSTTRG00000017088PUF6010084.261ENSORLG00000012279puf60b10083.685Oryzias_latipes
ENSTTRG00000017088PUF609978.626ENSORLG00020018144-9778.503Oryzias_latipes_hni
ENSTTRG00000017088PUF6010084.261ENSORLG00020007333puf6010083.685Oryzias_latipes_hni
ENSTTRG00000017088PUF6010083.365ENSORLG00015007718puf60b10083.556Oryzias_latipes_hsok
ENSTTRG00000017088PUF609978.626ENSORLG00015016833-9778.503Oryzias_latipes_hsok
ENSTTRG00000017088PUF6010081.391ENSOMEG00000001643puf60b9981.818Oryzias_melastigma
ENSTTRG00000017088PUF609979.655ENSOMEG00000022185-9778.846Oryzias_melastigma
ENSTTRG00000017088PUF6010099.031ENSOGAG00000006259PUF609299.031Otolemur_garnettii
ENSTTRG00000017088PUF6010096.505ENSOARG00000016235PUF609796.505Ovis_aries
ENSTTRG00000017088PUF6010098.643ENSPPAG00000029933PUF609798.643Pan_paniscus
ENSTTRG00000017088PUF6010098.643ENSPPRG00000003257PUF6010098.643Panthera_pardus
ENSTTRG00000017088PUF6010096.512ENSPTIG00000009795PUF609896.512Panthera_tigris_altaica
ENSTTRG00000017088PUF6010098.450ENSPTRG00000043963-9798.450Pan_troglodytes
ENSTTRG00000017088PUF6010098.450ENSPTRG00000020670PUF609798.450Pan_troglodytes
ENSTTRG00000017088PUF6010098.643ENSPANG00000021936PUF609798.643Papio_anubis
ENSTTRG00000017088PUF6010085.851ENSPKIG00000004295puf60a9990.882Paramormyrops_kingsleyae
ENSTTRG00000017088PUF6010087.308ENSPKIG00000012204puf60b10087.115Paramormyrops_kingsleyae
ENSTTRG00000017088PUF6010097.674ENSPSIG00000004679PUF609897.674Pelodiscus_sinensis
ENSTTRG00000017088PUF6010083.206ENSPMGG00000013444puf60b9983.206Periophthalmus_magnuspinnatus
ENSTTRG00000017088PUF6010098.643ENSPEMG00000008820Puf609298.643Peromyscus_maniculatus_bairdii
ENSTTRG00000017088PUF6010099.031ENSPCIG00000020270PUF609899.031Phascolarctos_cinereus
ENSTTRG00000017088PUF6010080.347ENSPFOG00000011118-9780.077Poecilia_formosa
ENSTTRG00000017088PUF6010084.069ENSPFOG00000019217puf60b9881.574Poecilia_formosa
ENSTTRG00000017088PUF6010084.069ENSPLAG00000010754puf60b10084.837Poecilia_latipinna
ENSTTRG00000017088PUF6010080.154ENSPLAG00000017025-9079.497Poecilia_latipinna
ENSTTRG00000017088PUF6010080.154ENSPMEG00000009767-9079.884Poecilia_mexicana
ENSTTRG00000017088PUF6010084.069ENSPMEG00000000838puf60b10084.837Poecilia_mexicana
ENSTTRG00000017088PUF6010081.308ENSPREG00000005440puf60b9882.731Poecilia_reticulata
ENSTTRG00000017088PUF608196.882ENSPPYG00000018951-9596.882Pongo_abelii
ENSTTRG00000017088PUF608198.801ENSPCAG00000014837PUF6010098.801Procavia_capensis
ENSTTRG00000017088PUF6010098.837ENSPCOG00000027981PUF609898.837Propithecus_coquereli
ENSTTRG00000017088PUF60100100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSTTRG00000017088PUF6010082.150ENSPNYG00000004273-9880.769Pundamilia_nyererei
ENSTTRG00000017088PUF6010084.453ENSPNYG00000002556puf60b10084.261Pundamilia_nyererei
ENSTTRG00000017088PUF6010076.967ENSPNAG00000019415puf60b8975.337Pygocentrus_nattereri
ENSTTRG00000017088PUF6010082.409ENSPNAG00000019909puf60a9981.870Pygocentrus_nattereri
ENSTTRG00000017088PUF6010098.450ENSRNOG00000009960Puf609298.450Rattus_norvegicus
ENSTTRG00000017088PUF6010098.643ENSRBIG00000035274PUF609798.643Rhinopithecus_bieti
ENSTTRG00000017088PUF6010098.643ENSRROG00000029360PUF609898.643Rhinopithecus_roxellana
ENSTTRG00000017088PUF6010097.864ENSSBOG00000027089PUF609797.864Saimiri_boliviensis_boliviensis
ENSTTRG00000017088PUF609098.276ENSSHAG00000006668PUF608998.276Sarcophilus_harrisii
ENSTTRG00000017088PUF6010081.502ENSSFOG00015019371puf60a9886.117Scleropages_formosus
ENSTTRG00000017088PUF609685.425ENSSFOG00015019619puf60b9985.223Scleropages_formosus
ENSTTRG00000017088PUF607393.863ENSSMAG00000016381puf60b7293.863Scophthalmus_maximus
ENSTTRG00000017088PUF609980.116ENSSDUG00000007048-9779.304Seriola_dumerili
ENSTTRG00000017088PUF6010082.707ENSSDUG00000009935puf60b9983.030Seriola_dumerili
ENSTTRG00000017088PUF6010085.029ENSSLDG00000024011puf60b10082.056Seriola_lalandi_dorsalis
ENSTTRG00000017088PUF6010079.658ENSSLDG00000007366-9978.897Seriola_lalandi_dorsalis
ENSTTRG00000017088PUF606783.526ENSSPUG00000013518PUF609483.237Sphenodon_punctatus
ENSTTRG00000017088PUF6010082.430ENSSPAG00000012144puf60b10082.243Stegastes_partitus
ENSTTRG00000017088PUF6010081.298ENSSPAG00000020285-10080.688Stegastes_partitus
ENSTTRG00000017088PUF6010099.031ENSSSCG00000038800PUF6010093.603Sus_scrofa
ENSTTRG00000017088PUF6010094.186ENSTGUG00000012797-9993.992Taeniopygia_guttata
ENSTTRG00000017088PUF6010076.938ENSTRUG00000008843-10076.311Takifugu_rubripes
ENSTTRG00000017088PUF6010083.877ENSTRUG00000005420puf60b10080.935Takifugu_rubripes
ENSTTRG00000017088PUF6010077.326ENSTNIG00000003069-9977.282Tetraodon_nigroviridis
ENSTTRG00000017088PUF6010083.877ENSTNIG00000013675puf60b9983.493Tetraodon_nigroviridis
ENSTTRG00000017088PUF607780.870ENSTBEG00000001899-10081.159Tupaia_belangeri
ENSTTRG00000017088PUF606294.257ENSTBEG00000002751-9992.881Tupaia_belangeri
ENSTTRG00000017088PUF6010099.031ENSUAMG00000024917PUF609799.031Ursus_americanus
ENSTTRG00000017088PUF6010094.175ENSUMAG00000000272PUF609293.981Ursus_maritimus
ENSTTRG00000017088PUF6010099.031ENSVVUG00000022527PUF6010099.031Vulpes_vulpes
ENSTTRG00000017088PUF6010093.605ENSXETG00000012469puf609793.411Xenopus_tropicalis
ENSTTRG00000017088PUF6010080.806ENSXCOG00000012355puf60b10081.574Xiphophorus_couchianus
ENSTTRG00000017088PUF6010077.799ENSXMAG00000010507-9876.402Xiphophorus_maculatus
ENSTTRG00000017088PUF6010084.069ENSXMAG00000001862puf60b10084.837Xiphophorus_maculatus

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