EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTTRG00000017239 (Gene tree)
Gene ID: -
Gene Symbol: TGS1
Alias: NCOA6IP|PIMT
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Tursiops_truncatus
Status: putative
Strand: Plus strand
Length: 35595 bases
Position: chrGeneScaffold_3528:381294-416888
Accession: 17843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTTRP00000016342	Methyltransf_15	PF09445.10	6.8e-44	1	1
ENSTTRP00000016342	UPF0020	PF01170.18	4.3e-07	1	1
ENSTTRP00000016342	Met_10	PF02475.16	1.3e-07	1	1
ENSTTRP00000016342	Methyltransf_31	PF13847.6	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTTRT00000017239	TGS1-201	2556	-	ENSTTRP00000016342	852 (aa)	-	UPI00018B7B0A

Gene Model

Click here to download ENSTTRG00000017239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTTRG00000017239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTTRG00000017239	TGS1	100	71.096	ENSG00000137574	TGS1	100	70.746	Homo_sapiens
ENSTTRG00000017239	TGS1	93	80.376	ENSAMEG00000001781	TGS1	94	80.376	Ailuropoda_melanoleuca
ENSTTRG00000017239	TGS1	69	38.148	ENSATEG00000005927	lyn	74	38.596	Anabas_testudineus
ENSTTRG00000017239	TGS1	77	50.989	ENSAPLG00000006073	-	100	50.989	Anas_platyrhynchos
ENSTTRG00000017239	TGS1	83	54.386	ENSACAG00000017988	TGS1	78	54.386	Anolis_carolinensis
ENSTTRG00000017239	TGS1	91	75.000	ENSANAG00000035525	TGS1	93	75.000	Aotus_nancymaae
ENSTTRG00000017239	TGS1	76	40.232	ENSACLG00000000261	lyn	80	41.410	Astatotilapia_calliptera
ENSTTRG00000017239	TGS1	76	43.199	ENSAMXG00000014086	lyn	80	41.405	Astyanax_mexicanus
ENSTTRG00000017239	TGS1	100	74.035	ENSBTAG00000005898	TGS1	100	74.620	Bos_taurus
ENSTTRG00000017239	TGS1	99	69.231	ENSCJAG00000016657	TGS1	98	68.415	Callithrix_jacchus
ENSTTRG00000017239	TGS1	93	79.032	ENSCAFG00000007011	TGS1	94	79.032	Canis_familiaris
ENSTTRG00000017239	TGS1	93	78.571	ENSCAFG00020015485	TGS1	94	78.571	Canis_lupus_dingo
ENSTTRG00000017239	TGS1	100	74.152	ENSCHIG00000013976	TGS1	100	74.503	Capra_hircus
ENSTTRG00000017239	TGS1	100	70.478	ENSTSYG00000000171	TGS1	100	70.362	Carlito_syrichta
ENSTTRG00000017239	TGS1	87	66.441	ENSCAPG00000013732	TGS1	91	66.712	Cavia_aperea
ENSTTRG00000017239	TGS1	93	71.042	ENSCPOG00000009713	TGS1	93	71.719	Cavia_porcellus
ENSTTRG00000017239	TGS1	99	70.431	ENSCCAG00000030476	TGS1	99	70.081	Cebus_capucinus
ENSTTRG00000017239	TGS1	100	71.096	ENSCATG00000035375	TGS1	100	71.096	Cercocebus_atys
ENSTTRG00000017239	TGS1	100	65.885	ENSCLAG00000009468	TGS1	99	66.354	Chinchilla_lanigera
ENSTTRG00000017239	TGS1	93	68.875	ENSCSAG00000014611	TGS1	99	68.875	Chlorocebus_sabaeus
ENSTTRG00000017239	TGS1	100	67.211	ENSCHOG00000001462	TGS1	100	66.744	Choloepus_hoffmanni
ENSTTRG00000017239	TGS1	88	77.419	ENSCPBG00000004958	TGS1	90	75.000	Chrysemys_picta_bellii
ENSTTRG00000017239	TGS1	100	70.629	ENSCANG00000041389	TGS1	100	70.629	Colobus_angolensis_palliatus
ENSTTRG00000017239	TGS1	93	74.074	ENSCGRG00001019470	Tgs1	93	74.074	Cricetulus_griseus_chok1gshd
ENSTTRG00000017239	TGS1	93	74.074	ENSCGRG00000008981	Tgs1	93	74.074	Cricetulus_griseus_crigri
ENSTTRG00000017239	TGS1	79	40.954	ENSDARG00000107511	lyn	99	72.222	Danio_rerio
ENSTTRG00000017239	TGS1	99	69.509	ENSDNOG00000008353	TGS1	99	69.276	Dasypus_novemcinctus
ENSTTRG00000017239	TGS1	93	71.486	ENSDORG00000012484	Tgs1	94	71.486	Dipodomys_ordii
ENSTTRG00000017239	TGS1	74	72.727	ENSETEG00000005126	TGS1	78	72.727	Echinops_telfairi
ENSTTRG00000017239	TGS1	93	75.158	ENSEASG00005016371	TGS1	95	75.158	Equus_asinus_asinus
ENSTTRG00000017239	TGS1	100	76.752	ENSECAG00000019399	TGS1	99	76.752	Equus_caballus
ENSTTRG00000017239	TGS1	63	91.176	ENSEEUG00000001735	TGS1	65	90.164	Erinaceus_europaeus
ENSTTRG00000017239	TGS1	81	39.782	ENSELUG00000012537	lyn	85	41.160	Esox_lucius
ENSTTRG00000017239	TGS1	93	79.408	ENSFCAG00000011478	TGS1	94	79.273	Felis_catus
ENSTTRG00000017239	TGS1	78	51.359	ENSFALG00000010249	TGS1	87	51.216	Ficedula_albicollis
ENSTTRG00000017239	TGS1	93	72.395	ENSFDAG00000011405	TGS1	93	72.260	Fukomys_damarensis
ENSTTRG00000017239	TGS1	88	78.125	ENSGALG00000015340	TGS1	85	78.125	Gallus_gallus
ENSTTRG00000017239	TGS1	88	77.419	ENSGAGG00000019590	TGS1	90	75.000	Gopherus_agassizii
ENSTTRG00000017239	TGS1	100	71.096	ENSGGOG00000008624	TGS1	100	71.096	Gorilla_gorilla
ENSTTRG00000017239	TGS1	68	37.418	ENSHBUG00000003518	lyn	100	37.724	Haplochromis_burtoni
ENSTTRG00000017239	TGS1	73	75.556	ENSHGLG00000000284	TGS1	92	75.000	Heterocephalus_glaber_female
ENSTTRG00000017239	TGS1	76	42.152	ENSHCOG00000014161	lyn	79	41.888	Hippocampus_comes
ENSTTRG00000017239	TGS1	77	41.945	ENSIPUG00000002294	tgs1	77	42.258	Ictalurus_punctatus
ENSTTRG00000017239	TGS1	100	68.187	ENSSTOG00000009597	TGS1	100	68.070	Ictidomys_tridecemlineatus
ENSTTRG00000017239	TGS1	93	71.429	ENSJJAG00000016239	Tgs1	94	71.429	Jaculus_jaculus
ENSTTRG00000017239	TGS1	79	41.785	ENSKMAG00000019371	-	84	41.844	Kryptolebias_marmoratus
ENSTTRG00000017239	TGS1	82	52.941	ENSLACG00000008074	TGS1	85	52.941	Latimeria_chalumnae
ENSTTRG00000017239	TGS1	76	45.889	ENSLOCG00000005492	lyn	95	44.792	Lepisosteus_oculatus
ENSTTRG00000017239	TGS1	93	75.472	ENSLAFG00000015386	TGS1	93	75.472	Loxodonta_africana
ENSTTRG00000017239	TGS1	100	71.096	ENSMFAG00000029838	TGS1	100	70.862	Macaca_fascicularis
ENSTTRG00000017239	TGS1	100	70.396	ENSMMUG00000005478	TGS1	100	70.396	Macaca_mulatta
ENSTTRG00000017239	TGS1	100	70.979	ENSMNEG00000023719	TGS1	100	70.746	Macaca_nemestrina
ENSTTRG00000017239	TGS1	100	71.096	ENSMLEG00000034807	TGS1	100	71.096	Mandrillus_leucophaeus
ENSTTRG00000017239	TGS1	76	40.376	ENSMZEG00005015681	lyn	80	41.557	Maylandia_zebra
ENSTTRG00000017239	TGS1	84	49.342	ENSMGAG00000010966	TGS1	93	50.272	Meleagris_gallopavo
ENSTTRG00000017239	TGS1	93	71.429	ENSMAUG00000009875	Tgs1	94	71.429	Mesocricetus_auratus
ENSTTRG00000017239	TGS1	100	70.862	ENSMICG00000011199	TGS1	100	70.979	Microcebus_murinus
ENSTTRG00000017239	TGS1	99	62.911	ENSMOCG00000019560	Tgs1	99	62.500	Microtus_ochrogaster
ENSTTRG00000017239	TGS1	58	46.205	ENSMMOG00000021495	lyn	82	45.455	Mola_mola
ENSTTRG00000017239	TGS1	86	63.539	ENSMODG00000009174	TGS1	98	63.673	Monodelphis_domestica
ENSTTRG00000017239	TGS1	99	62.837	MGP_CAROLIEiJ_G0025779	-	92	73.214	Mus_caroli
ENSTTRG00000017239	TGS1	93	73.214	MGP_CAROLIEiJ_G0025780	-	92	73.214	Mus_caroli
ENSTTRG00000017239	TGS1	99	62.251	ENSMUSG00000028233	Tgs1	92	73.214	Mus_musculus
ENSTTRG00000017239	TGS1	99	55.671	MGP_PahariEiJ_G0023902	-	92	73.214	Mus_pahari
ENSTTRG00000017239	TGS1	99	62.089	MGP_PahariEiJ_G0023901	-	93	73.214	Mus_pahari
ENSTTRG00000017239	TGS1	57	79.724	MGP_SPRETEiJ_G0026726	-	95	78.475	Mus_spretus
ENSTTRG00000017239	TGS1	99	62.368	MGP_SPRETEiJ_G0026727	-	92	73.214	Mus_spretus
ENSTTRG00000017239	TGS1	86	78.571	ENSMPUG00000010475	TGS1	93	78.571	Mustela_putorius_furo
ENSTTRG00000017239	TGS1	100	71.729	ENSMLUG00000014857	TGS1	100	71.729	Myotis_lucifugus
ENSTTRG00000017239	TGS1	100	66.121	ENSNGAG00000019532	Tgs1	99	65.771	Nannospalax_galili
ENSTTRG00000017239	TGS1	100	71.329	ENSNLEG00000001101	TGS1	100	71.329	Nomascus_leucogenys
ENSTTRG00000017239	TGS1	86	61.507	ENSMEUG00000001697	TGS1	93	61.777	Notamacropus_eugenii
ENSTTRG00000017239	TGS1	82	64.479	ENSODEG00000002948	TGS1	90	63.519	Octodon_degus
ENSTTRG00000017239	TGS1	87	59.686	ENSOANG00000021853	TGS1	96	59.948	Ornithorhynchus_anatinus
ENSTTRG00000017239	TGS1	100	68.495	ENSOCUG00000017522	TGS1	100	68.495	Oryctolagus_cuniculus
ENSTTRG00000017239	TGS1	76	41.871	ENSOMEG00000020174	lyn	80	42.060	Oryzias_melastigma
ENSTTRG00000017239	TGS1	93	76.786	ENSOGAG00000012572	TGS1	93	76.786	Otolemur_garnettii
ENSTTRG00000017239	TGS1	100	73.893	ENSOARG00000014613	TGS1	100	74.242	Ovis_aries
ENSTTRG00000017239	TGS1	100	71.096	ENSPPAG00000039058	TGS1	100	71.096	Pan_paniscus
ENSTTRG00000017239	TGS1	93	79.408	ENSPPRG00000000677	TGS1	94	79.139	Panthera_pardus
ENSTTRG00000017239	TGS1	93	79.273	ENSPTIG00000005122	TGS1	94	79.004	Panthera_tigris_altaica
ENSTTRG00000017239	TGS1	100	71.096	ENSPTRG00000020262	TGS1	100	71.096	Pan_troglodytes
ENSTTRG00000017239	TGS1	100	71.212	ENSPANG00000018910	TGS1	100	71.212	Papio_anubis
ENSTTRG00000017239	TGS1	76	41.321	ENSPKIG00000005454	lyn	67	42.401	Paramormyrops_kingsleyae
ENSTTRG00000017239	TGS1	92	57.895	ENSPSIG00000014983	TGS1	92	57.895	Pelodiscus_sinensis
ENSTTRG00000017239	TGS1	93	74.545	ENSPEMG00000007957	Tgs1	94	74.545	Peromyscus_maniculatus_bairdii
ENSTTRG00000017239	TGS1	99	60.393	ENSPCIG00000016232	TGS1	99	59.839	Phascolarctos_cinereus
ENSTTRG00000017239	TGS1	76	38.316	ENSPFOG00000001545	-	100	38.026	Poecilia_formosa
ENSTTRG00000017239	TGS1	69	38.376	ENSPREG00000012261	-	78	38.057	Poecilia_reticulata
ENSTTRG00000017239	TGS1	100	71.212	ENSPPYG00000018597	TGS1	100	70.513	Pongo_abelii
ENSTTRG00000017239	TGS1	100	65.344	ENSPCAG00000000143	TGS1	100	65.111	Procavia_capensis
ENSTTRG00000017239	TGS1	100	70.862	ENSPCOG00000013537	TGS1	100	71.445	Propithecus_coquereli
ENSTTRG00000017239	TGS1	100	66.901	ENSPVAG00000016399	TGS1	100	66.433	Pteropus_vampyrus
ENSTTRG00000017239	TGS1	81	42.238	ENSPNAG00000022249	lyn	83	42.356	Pygocentrus_nattereri
ENSTTRG00000017239	TGS1	100	63.785	ENSRNOG00000008156	Tgs1	93	75.000	Rattus_norvegicus
ENSTTRG00000017239	TGS1	100	68.531	ENSRBIG00000041893	TGS1	100	68.531	Rhinopithecus_bieti
ENSTTRG00000017239	TGS1	100	70.862	ENSRROG00000035127	TGS1	100	70.746	Rhinopithecus_roxellana
ENSTTRG00000017239	TGS1	96	67.844	ENSSBOG00000024469	TGS1	99	67.600	Saimiri_boliviensis_boliviensis
ENSTTRG00000017239	TGS1	99	59.584	ENSSHAG00000012878	TGS1	99	59.815	Sarcophilus_harrisii
ENSTTRG00000017239	TGS1	79	42.274	ENSSFOG00015001308	tgs1	76	42.105	Scleropages_formosus
ENSTTRG00000017239	TGS1	76	40.643	ENSSMAG00000019469	lyn	79	41.108	Scophthalmus_maximus
ENSTTRG00000017239	TGS1	90	69.082	ENSSSCG00000006251	TGS1	98	68.952	Sus_scrofa
ENSTTRG00000017239	TGS1	80	78.125	ENSTGUG00000011050	TGS1	84	78.125	Taeniopygia_guttata
ENSTTRG00000017239	TGS1	59	61.397	ENSTRUG00000009532	lyn	53	61.624	Takifugu_rubripes
ENSTTRG00000017239	TGS1	54	72.897	ENSTNIG00000018133	lyn	84	40.323	Tetraodon_nigroviridis
ENSTTRG00000017239	TGS1	78	90.164	ENSTBEG00000010953	TGS1	78	90.164	Tupaia_belangeri
ENSTTRG00000017239	TGS1	93	78.735	ENSUAMG00000027718	TGS1	94	78.571	Ursus_americanus
ENSTTRG00000017239	TGS1	86	78.571	ENSUMAG00000009761	TGS1	93	78.571	Ursus_maritimus
ENSTTRG00000017239	TGS1	84	73.157	ENSVPAG00000001166	TGS1	88	73.157	Vicugna_pacos
ENSTTRG00000017239	TGS1	86	77.353	ENSVVUG00000017821	TGS1	93	77.353	Vulpes_vulpes
ENSTTRG00000017239	TGS1	85	56.250	ENSXETG00000005648	tgs1	85	56.250	Xenopus_tropicalis