EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000000212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 2439 bases
Position: chrLZNR01014181.1:4751-7189
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	1	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	2	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	3	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	4	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	5	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	6	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	7	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	8	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	9	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	10	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	11	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	12	13
ENSUAMP00000000233	zf-C2H2	PF00096.26	3.1e-69	13	13
ENSUAMP00000000233	zf-met	PF12874.7	6.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000000286	-	1560	-	ENSUAMP00000000233	519 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000000212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000000212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000000212	-	79	37.057	ENSUAMG00000016827	ZNF319	91	37.923
ENSUAMG00000000212	-	79	51.106	ENSUAMG00000014969	ZNF112	79	51.106
ENSUAMG00000000212	-	79	56.637	ENSUAMG00000004882	-	68	54.680
ENSUAMG00000000212	-	79	37.755	ENSUAMG00000024556	ZNF652	88	38.060
ENSUAMG00000000212	-	79	49.727	ENSUAMG00000027384	-	85	51.974
ENSUAMG00000000212	-	79	46.667	ENSUAMG00000014479	ZNF317	85	46.667
ENSUAMG00000000212	-	79	33.333	ENSUAMG00000011329	ZFAT	54	33.333
ENSUAMG00000000212	-	77	39.796	ENSUAMG00000015024	ZNF770	76	39.796
ENSUAMG00000000212	-	79	51.344	ENSUAMG00000001062	-	99	51.344
ENSUAMG00000000212	-	76	31.461	ENSUAMG00000019189	GTF3A	90	38.961
ENSUAMG00000000212	-	82	51.648	ENSUAMG00000019652	-	92	51.648
ENSUAMG00000000212	-	76	40.650	ENSUAMG00000014942	SNAI2	63	40.650
ENSUAMG00000000212	-	79	49.868	ENSUAMG00000013694	ZNF234	94	49.757
ENSUAMG00000000212	-	79	52.320	ENSUAMG00000013693	ZNF226	79	51.942
ENSUAMG00000000212	-	79	51.394	ENSUAMG00000004827	-	55	48.727
ENSUAMG00000000212	-	79	36.364	ENSUAMG00000009994	PRDM5	60	36.364
ENSUAMG00000000212	-	83	50.000	ENSUAMG00000026246	ZNF454	89	51.459
ENSUAMG00000000212	-	79	53.333	ENSUAMG00000010469	ZNF582	77	53.333
ENSUAMG00000000212	-	79	53.608	ENSUAMG00000012109	ZNF658	91	53.608
ENSUAMG00000000212	-	79	51.394	ENSUAMG00000022172	-	53	48.727
ENSUAMG00000000212	-	79	52.764	ENSUAMG00000027415	-	85	52.764
ENSUAMG00000000212	-	79	48.810	ENSUAMG00000020195	ZNF628	60	48.810
ENSUAMG00000000212	-	86	32.692	ENSUAMG00000019888	ZNF784	71	34.211
ENSUAMG00000000212	-	81	49.383	ENSUAMG00000015472	ZNF236	68	43.678
ENSUAMG00000000212	-	89	30.935	ENSUAMG00000008738	ZNF646	89	33.010
ENSUAMG00000000212	-	79	51.327	ENSUAMG00000021858	-	51	51.327
ENSUAMG00000000212	-	80	44.872	ENSUAMG00000016706	-	94	44.872
ENSUAMG00000000212	-	98	45.988	ENSUAMG00000017632	ZFP1	98	45.988
ENSUAMG00000000212	-	79	41.389	ENSUAMG00000010517	-	87	41.389
ENSUAMG00000000212	-	83	49.367	ENSUAMG00000017817	-	99	49.367
ENSUAMG00000000212	-	84	50.000	ENSUAMG00000028270	-	90	50.380
ENSUAMG00000000212	-	98	51.090	ENSUAMG00000027381	-	95	51.090
ENSUAMG00000000212	-	79	50.400	ENSUAMG00000005918	-	93	50.400
ENSUAMG00000000212	-	79	36.186	ENSUAMG00000023864	ZNF574	93	43.103
ENSUAMG00000000212	-	79	41.081	ENSUAMG00000012111	ZFP64	74	34.802
ENSUAMG00000000212	-	79	34.909	ENSUAMG00000011794	ZNF526	93	33.213
ENSUAMG00000000212	-	79	53.205	ENSUAMG00000005458	ZNF235	74	51.741
ENSUAMG00000000212	-	77	42.188	ENSUAMG00000020030	SNAI3	54	42.188
ENSUAMG00000000212	-	79	51.449	ENSUAMG00000027191	-	77	51.449

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000000212	-	90	97.859	ENSCAFG00020003589	-	98	87.885	Canis_lupus_dingo
ENSUAMG00000000212	-	89	79.845	ENSTSYG00000008405	-	86	79.580	Carlito_syrichta
ENSUAMG00000000212	-	87	86.755	ENSCAPG00000013118	-	85	86.207	Cavia_aperea
ENSUAMG00000000212	-	90	88.699	ENSCPOG00000034791	-	84	88.699	Cavia_porcellus
ENSUAMG00000000212	-	89	86.515	ENSCLAG00000014648	-	90	86.515	Chinchilla_lanigera
ENSUAMG00000000212	-	90	85.127	ENSCHOG00000008173	-	86	85.127	Choloepus_hoffmanni
ENSUAMG00000000212	-	79	96.573	ENSCHOG00000003898	-	100	96.573	Choloepus_hoffmanni
ENSUAMG00000000212	-	90	84.538	ENSCGRG00001021088	Zfp354a	86	84.538	Cricetulus_griseus_chok1gshd
ENSUAMG00000000212	-	90	84.538	ENSCGRG00000015037	Zfp354a	86	84.538	Cricetulus_griseus_crigri
ENSUAMG00000000212	-	79	97.165	ENSDNOG00000043806	-	100	97.165	Dasypus_novemcinctus
ENSUAMG00000000212	-	90	88.174	ENSDORG00000009396	Zfp354a	86	88.174	Dipodomys_ordii
ENSUAMG00000000212	-	86	79.477	ENSETEG00000020249	-	100	79.477	Echinops_telfairi
ENSUAMG00000000212	-	90	81.274	ENSEEUG00000008362	-	100	81.274	Erinaceus_europaeus
ENSUAMG00000000212	-	90	89.053	ENSFDAG00000015190	-	89	89.053	Fukomys_damarensis
ENSUAMG00000000212	-	90	86.820	ENSHGLG00000005975	-	85	86.820	Heterocephalus_glaber_female
ENSUAMG00000000212	-	90	86.765	ENSHGLG00100012284	-	100	86.765	Heterocephalus_glaber_male
ENSUAMG00000000212	-	92	85.347	ENSSTOG00000024118	-	99	85.347	Ictidomys_tridecemlineatus
ENSUAMG00000000212	-	88	82.772	ENSLAFG00000002909	-	100	82.772	Loxodonta_africana
ENSUAMG00000000212	-	91	83.929	ENSMAUG00000000735	Zfp354a	95	83.929	Mesocricetus_auratus
ENSUAMG00000000212	-	94	80.074	ENSMICG00000006390	ZNF354A	88	80.074	Microcebus_murinus
ENSUAMG00000000212	-	90	83.333	ENSMOCG00000003692	Zfp354a	89	83.333	Microtus_ochrogaster
ENSUAMG00000000212	-	90	84.663	MGP_CAROLIEiJ_G0016306	Zfp354a	85	84.663	Mus_caroli
ENSUAMG00000000212	-	90	84.867	ENSMUSG00000020364	Zfp354a	85	84.867	Mus_musculus
ENSUAMG00000000212	-	90	84.867	MGP_PahariEiJ_G0017441	Zfp354a	85	84.867	Mus_pahari
ENSUAMG00000000212	-	90	87.734	ENSNGAG00000011769	Zfp354a	85	87.397	Nannospalax_galili
ENSUAMG00000000212	-	90	87.605	ENSODEG00000008278	-	95	87.605	Octodon_degus
ENSUAMG00000000212	-	98	79.041	ENSPPAG00000039371	ZNF354A	94	79.041	Pan_paniscus
ENSUAMG00000000212	-	89	83.977	ENSPTRG00000017606	ZNF354A	94	83.977	Pan_troglodytes
ENSUAMG00000000212	-	91	82.129	ENSPEMG00000024167	Zfp354a	85	82.129	Peromyscus_maniculatus_bairdii