EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000000223 (Gene tree)
Gene ID: -
Gene Symbol: CELF1
Alias: BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 67320 bases
Position: chrLZNR01004960.1:108862-176181
Accession: 2549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000000722	RRM_1	PF00076.22	9.4e-38	1	2
ENSUAMP00000000722	RRM_1	PF00076.22	9.4e-38	2	2
ENSUAMP00000000677	RRM_1	PF00076.22	1.6e-31	1	2
ENSUAMP00000000677	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000000828	CELF1-202	1389	-	ENSUAMP00000000722	463 (aa)	-	-
ENSUAMT00000000777	CELF1-201	1598	-	ENSUAMP00000000677	425 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000000223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000000223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000000223	CELF1	51	30.392	ENSUAMG00000000405	ELAVL3	50	30.392
ENSUAMG00000000223	CELF1	92	39.671	ENSUAMG00000027174	CELF5	54	55.376
ENSUAMG00000000223	CELF1	91	45.357	ENSUAMG00000019567	CELF3	77	54.891

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000000223	CELF1	100	99.353	ENSG00000149187	CELF1	100	100.000	Homo_sapiens
ENSUAMG00000000223	CELF1	94	82.619	ENSAPOG00000024000	celf1	90	83.747	Acanthochromis_polyacanthus
ENSUAMG00000000223	CELF1	100	99.784	ENSAMEG00000007596	CELF1	90	99.784	Ailuropoda_melanoleuca
ENSUAMG00000000223	CELF1	94	80.594	ENSACIG00000023843	celf1	89	79.224	Amphilophus_citrinellus
ENSUAMG00000000223	CELF1	94	82.619	ENSAOCG00000001252	celf1	90	83.747	Amphiprion_ocellaris
ENSUAMG00000000223	CELF1	98	83.007	ENSAPEG00000002340	celf1	96	84.096	Amphiprion_percula
ENSUAMG00000000223	CELF1	94	81.465	ENSATEG00000010871	celf1	89	80.320	Anabas_testudineus
ENSUAMG00000000223	CELF1	100	94.839	ENSACAG00000002114	CELF1	90	93.737	Anolis_carolinensis
ENSUAMG00000000223	CELF1	100	99.568	ENSANAG00000031770	CELF1	90	99.568	Aotus_nancymaae
ENSUAMG00000000223	CELF1	100	84.267	ENSACLG00000010181	-	90	84.267	Astatotilapia_calliptera
ENSUAMG00000000223	CELF1	98	78.436	ENSAMXG00000020576	celf1	89	82.192	Astyanax_mexicanus
ENSUAMG00000000223	CELF1	100	99.136	ENSBTAG00000002520	CELF1	90	99.136	Bos_taurus
ENSUAMG00000000223	CELF1	100	99.353	ENSCJAG00000020133	CELF1	90	99.353	Callithrix_jacchus
ENSUAMG00000000223	CELF1	100	100.000	ENSCAFG00000008452	CELF1	90	100.000	Canis_familiaris
ENSUAMG00000000223	CELF1	100	100.000	ENSCAFG00020025487	CELF1	90	100.000	Canis_lupus_dingo
ENSUAMG00000000223	CELF1	100	99.352	ENSCHIG00000024582	CELF1	90	99.352	Capra_hircus
ENSUAMG00000000223	CELF1	100	99.352	ENSTSYG00000003866	CELF1	90	99.541	Carlito_syrichta
ENSUAMG00000000223	CELF1	100	68.319	ENSCAPG00000006787	CELF1	88	68.534	Cavia_aperea
ENSUAMG00000000223	CELF1	94	99.542	ENSCPOG00000036381	CELF1	90	99.542	Cavia_porcellus
ENSUAMG00000000223	CELF1	100	99.353	ENSCCAG00000033487	CELF1	90	99.541	Cebus_capucinus
ENSUAMG00000000223	CELF1	94	99.541	ENSCATG00000040143	CELF1	90	99.541	Cercocebus_atys
ENSUAMG00000000223	CELF1	100	99.352	ENSCLAG00000011791	CELF1	90	99.352	Chinchilla_lanigera
ENSUAMG00000000223	CELF1	100	99.352	ENSCSAG00000005786	CELF1	90	99.352	Chlorocebus_sabaeus
ENSUAMG00000000223	CELF1	63	100.000	ENSCHOG00000004196	-	66	100.000	Choloepus_hoffmanni
ENSUAMG00000000223	CELF1	100	95.708	ENSCPBG00000022914	CELF1	90	96.583	Chrysemys_picta_bellii
ENSUAMG00000000223	CELF1	100	99.352	ENSCANG00000032689	CELF1	90	99.352	Colobus_angolensis_palliatus
ENSUAMG00000000223	CELF1	100	98.920	ENSCGRG00001011274	Celf1	90	98.920	Cricetulus_griseus_chok1gshd
ENSUAMG00000000223	CELF1	100	98.920	ENSCGRG00000015357	Celf1	90	98.920	Cricetulus_griseus_crigri
ENSUAMG00000000223	CELF1	94	71.854	ENSCSEG00000008675	celf1	89	70.709	Cynoglossus_semilaevis
ENSUAMG00000000223	CELF1	95	80.392	ENSDARG00000005315	celf1	100	88.757	Danio_rerio
ENSUAMG00000000223	CELF1	100	99.568	ENSDNOG00000009523	CELF1	90	99.541	Dasypus_novemcinctus
ENSUAMG00000000223	CELF1	100	87.257	ENSDORG00000013721	Celf1	89	87.257	Dipodomys_ordii
ENSUAMG00000000223	CELF1	66	100.000	ENSETEG00000004507	CELF1	71	100.000	Echinops_telfairi
ENSUAMG00000000223	CELF1	100	91.379	ENSEASG00005010831	CELF1	90	90.948	Equus_asinus_asinus
ENSUAMG00000000223	CELF1	100	100.000	ENSECAG00000007741	CELF1	90	99.136	Equus_caballus
ENSUAMG00000000223	CELF1	94	79.128	ENSEEUG00000009782	CELF1	90	79.128	Erinaceus_europaeus
ENSUAMG00000000223	CELF1	95	81.400	ENSELUG00000023173	celf1	90	81.718	Esox_lucius
ENSUAMG00000000223	CELF1	100	100.000	ENSFCAG00000002535	CELF1	90	100.000	Felis_catus
ENSUAMG00000000223	CELF1	100	95.064	ENSFALG00000006402	CELF1	90	93.534	Ficedula_albicollis
ENSUAMG00000000223	CELF1	95	98.759	ENSFDAG00000008517	CELF1	90	98.856	Fukomys_damarensis
ENSUAMG00000000223	CELF1	95	82.805	ENSGMOG00000012783	celf1	89	82.127	Gadus_morhua
ENSUAMG00000000223	CELF1	100	95.708	ENSGALG00000008097	CELF1	90	95.708	Gallus_gallus
ENSUAMG00000000223	CELF1	100	76.645	ENSGACG00000014226	celf1	85	80.702	Gasterosteus_aculeatus
ENSUAMG00000000223	CELF1	95	96.825	ENSGAGG00000011562	CELF1	90	95.890	Gopherus_agassizii
ENSUAMG00000000223	CELF1	100	99.353	ENSGGOG00000004106	CELF1	90	99.353	Gorilla_gorilla
ENSUAMG00000000223	CELF1	100	84.267	ENSHBUG00000017881	celf1	90	84.267	Haplochromis_burtoni
ENSUAMG00000000223	CELF1	94	99.085	ENSHGLG00000006909	-	90	99.085	Heterocephalus_glaber_female
ENSUAMG00000000223	CELF1	94	91.284	ENSHGLG00000019214	-	89	90.826	Heterocephalus_glaber_female
ENSUAMG00000000223	CELF1	94	94.725	ENSHGLG00100017423	-	89	94.266	Heterocephalus_glaber_male
ENSUAMG00000000223	CELF1	94	99.085	ENSHGLG00100013863	-	90	99.085	Heterocephalus_glaber_male
ENSUAMG00000000223	CELF1	94	84.018	ENSHCOG00000000258	celf1	90	83.333	Hippocampus_comes
ENSUAMG00000000223	CELF1	94	80.220	ENSIPUG00000023708	celf1	90	80.659	Ictalurus_punctatus
ENSUAMG00000000223	CELF1	100	99.352	ENSSTOG00000000613	CELF1	90	99.352	Ictidomys_tridecemlineatus
ENSUAMG00000000223	CELF1	100	99.568	ENSJJAG00000020280	Celf1	90	99.568	Jaculus_jaculus
ENSUAMG00000000223	CELF1	98	83.333	ENSLBEG00000018296	celf1	84	84.081	Labrus_bergylta
ENSUAMG00000000223	CELF1	62	83.391	ENSLBEG00000002047	-	83	81.315	Labrus_bergylta
ENSUAMG00000000223	CELF1	85	81.250	ENSLACG00000018990	CELF1	92	81.522	Latimeria_chalumnae
ENSUAMG00000000223	CELF1	95	85.275	ENSLOCG00000005966	celf1	85	84.835	Lepisosteus_oculatus
ENSUAMG00000000223	CELF1	100	99.136	ENSLAFG00000003484	CELF1	90	99.136	Loxodonta_africana
ENSUAMG00000000223	CELF1	94	99.314	ENSMFAG00000003505	CELF1	90	99.314	Macaca_fascicularis
ENSUAMG00000000223	CELF1	100	99.352	ENSMMUG00000011657	CELF1	90	99.352	Macaca_mulatta
ENSUAMG00000000223	CELF1	100	99.353	ENSMNEG00000022558	CELF1	90	99.541	Macaca_nemestrina
ENSUAMG00000000223	CELF1	100	99.568	ENSMLEG00000040834	CELF1	90	99.568	Mandrillus_leucophaeus
ENSUAMG00000000223	CELF1	100	77.526	ENSMAMG00000010052	celf1	89	79.680	Mastacembelus_armatus
ENSUAMG00000000223	CELF1	100	84.267	ENSMZEG00005018307	celf1	90	84.267	Maylandia_zebra
ENSUAMG00000000223	CELF1	97	93.407	ENSMGAG00000010629	CELF1	88	93.407	Meleagris_gallopavo
ENSUAMG00000000223	CELF1	100	98.920	ENSMAUG00000009468	Celf1	90	98.920	Mesocricetus_auratus
ENSUAMG00000000223	CELF1	100	99.353	ENSMICG00000045113	CELF1	90	99.353	Microcebus_murinus
ENSUAMG00000000223	CELF1	100	99.136	ENSMOCG00000012633	Celf1	90	99.136	Microtus_ochrogaster
ENSUAMG00000000223	CELF1	95	81.136	ENSMMOG00000015460	celf1	85	80.682	Mola_mola
ENSUAMG00000000223	CELF1	94	97.706	ENSMODG00000019913	CELF1	90	97.706	Monodelphis_domestica
ENSUAMG00000000223	CELF1	100	99.136	MGP_CAROLIEiJ_G0023949	Celf1	90	99.136	Mus_caroli
ENSUAMG00000000223	CELF1	100	99.136	ENSMUSG00000005506	Celf1	90	99.136	Mus_musculus
ENSUAMG00000000223	CELF1	100	99.136	MGP_PahariEiJ_G0025385	Celf1	90	99.136	Mus_pahari
ENSUAMG00000000223	CELF1	100	98.920	MGP_SPRETEiJ_G0024859	Celf1	90	98.920	Mus_spretus
ENSUAMG00000000223	CELF1	100	100.000	ENSMPUG00000003960	CELF1	84	100.000	Mustela_putorius_furo
ENSUAMG00000000223	CELF1	100	99.138	ENSMLUG00000016631	CELF1	90	99.138	Myotis_lucifugus
ENSUAMG00000000223	CELF1	100	97.624	ENSNGAG00000017390	Celf1	90	97.624	Nannospalax_galili
ENSUAMG00000000223	CELF1	92	56.436	ENSNBRG00000023547	-	79	53.103	Neolamprologus_brichardi
ENSUAMG00000000223	CELF1	100	99.352	ENSNLEG00000014638	CELF1	90	99.352	Nomascus_leucogenys
ENSUAMG00000000223	CELF1	94	97.477	ENSMEUG00000007763	CELF1	90	97.477	Notamacropus_eugenii
ENSUAMG00000000223	CELF1	94	98.624	ENSOPRG00000003239	-	90	98.624	Ochotona_princeps
ENSUAMG00000000223	CELF1	100	99.352	ENSODEG00000015204	CELF1	90	99.352	Octodon_degus
ENSUAMG00000000223	CELF1	100	83.441	ENSONIG00000008300	celf1	90	83.441	Oreochromis_niloticus
ENSUAMG00000000223	CELF1	100	96.983	ENSOANG00000007896	CELF1	90	96.983	Ornithorhynchus_anatinus
ENSUAMG00000000223	CELF1	100	98.920	ENSOCUG00000001311	CELF1	90	98.920	Oryctolagus_cuniculus
ENSUAMG00000000223	CELF1	94	77.221	ENSOMEG00000002381	celf1	90	76.993	Oryzias_melastigma
ENSUAMG00000000223	CELF1	100	98.922	ENSOGAG00000011600	CELF1	90	98.922	Otolemur_garnettii
ENSUAMG00000000223	CELF1	100	99.138	ENSOARG00000006924	CELF1	90	99.312	Ovis_aries
ENSUAMG00000000223	CELF1	94	99.541	ENSPPAG00000033870	CELF1	90	99.541	Pan_paniscus
ENSUAMG00000000223	CELF1	100	99.784	ENSPPRG00000002376	CELF1	90	100.000	Panthera_pardus
ENSUAMG00000000223	CELF1	100	100.000	ENSPTIG00000003974	CELF1	90	100.000	Panthera_tigris_altaica
ENSUAMG00000000223	CELF1	100	99.353	ENSPTRG00000052299	CELF1	90	99.353	Pan_troglodytes
ENSUAMG00000000223	CELF1	100	99.353	ENSPANG00000021676	CELF1	90	99.353	Papio_anubis
ENSUAMG00000000223	CELF1	94	85.616	ENSPKIG00000012324	celf1	90	84.475	Paramormyrops_kingsleyae
ENSUAMG00000000223	CELF1	100	93.777	ENSPSIG00000003922	CELF1	90	93.348	Pelodiscus_sinensis
ENSUAMG00000000223	CELF1	100	86.381	ENSPMGG00000013192	celf1	85	74.943	Periophthalmus_magnuspinnatus
ENSUAMG00000000223	CELF1	100	99.136	ENSPEMG00000015644	Celf1	90	99.136	Peromyscus_maniculatus_bairdii
ENSUAMG00000000223	CELF1	98	97.566	ENSPCIG00000022947	CELF1	90	97.566	Phascolarctos_cinereus
ENSUAMG00000000223	CELF1	62	65.278	ENSPFOG00000000961	-	85	62.153	Poecilia_formosa
ENSUAMG00000000223	CELF1	96	66.476	ENSPLAG00000019373	-	85	66.189	Poecilia_latipinna
ENSUAMG00000000223	CELF1	100	71.613	ENSPREG00000022185	-	89	69.330	Poecilia_reticulata
ENSUAMG00000000223	CELF1	100	98.922	ENSPPYG00000003302	CELF1	90	98.922	Pongo_abelii
ENSUAMG00000000223	CELF1	94	97.706	ENSPCAG00000002631	CELF1	90	97.706	Procavia_capensis
ENSUAMG00000000223	CELF1	100	94.181	ENSPCOG00000021865	CELF1	90	93.750	Propithecus_coquereli
ENSUAMG00000000223	CELF1	91	100.000	ENSPVAG00000007340	CELF1	88	100.000	Pteropus_vampyrus
ENSUAMG00000000223	CELF1	90	73.746	ENSPNYG00000023719	-	88	71.386	Pundamilia_nyererei
ENSUAMG00000000223	CELF1	98	78.903	ENSPNAG00000013418	celf1	87	80.380	Pygocentrus_nattereri
ENSUAMG00000000223	CELF1	94	98.627	ENSRNOG00000010379	Celf1	90	98.627	Rattus_norvegicus
ENSUAMG00000000223	CELF1	100	99.353	ENSRBIG00000042406	CELF1	90	99.353	Rhinopithecus_bieti
ENSUAMG00000000223	CELF1	100	99.568	ENSRROG00000032588	CELF1	90	99.568	Rhinopithecus_roxellana
ENSUAMG00000000223	CELF1	100	87.284	ENSSBOG00000021912	CELF1	89	87.284	Saimiri_boliviensis_boliviensis
ENSUAMG00000000223	CELF1	94	97.712	ENSSHAG00000017438	CELF1	90	97.712	Sarcophilus_harrisii
ENSUAMG00000000223	CELF1	98	84.314	ENSSFOG00015019353	celf1	87	83.660	Scleropages_formosus
ENSUAMG00000000223	CELF1	98	82.932	ENSSMAG00000013827	celf1	86	82.932	Scophthalmus_maximus
ENSUAMG00000000223	CELF1	98	82.276	ENSSDUG00000011558	celf1	86	82.276	Seriola_dumerili
ENSUAMG00000000223	CELF1	100	85.161	ENSSLDG00000012863	celf1	90	85.161	Seriola_lalandi_dorsalis
ENSUAMG00000000223	CELF1	94	93.349	ENSSARG00000003207	CELF1	90	93.349	Sorex_araneus
ENSUAMG00000000223	CELF1	100	96.352	ENSSPUG00000004228	CELF1	90	96.352	Sphenodon_punctatus
ENSUAMG00000000223	CELF1	94	82.619	ENSSPAG00000009569	celf1	90	83.747	Stegastes_partitus
ENSUAMG00000000223	CELF1	100	100.000	ENSSSCG00000013233	CELF1	90	100.000	Sus_scrofa
ENSUAMG00000000223	CELF1	100	96.129	ENSTGUG00000010377	CELF1	90	96.129	Taeniopygia_guttata
ENSUAMG00000000223	CELF1	82	77.714	ENSTRUG00000000617	celf1	78	77.714	Takifugu_rubripes
ENSUAMG00000000223	CELF1	77	99.010	ENSTBEG00000005140	CELF1	73	99.010	Tupaia_belangeri
ENSUAMG00000000223	CELF1	94	100.000	ENSTTRG00000014157	CELF1	90	100.000	Tursiops_truncatus
ENSUAMG00000000223	CELF1	100	100.000	ENSUMAG00000009218	CELF1	90	100.000	Ursus_maritimus
ENSUAMG00000000223	CELF1	94	85.550	ENSVPAG00000000336	CELF1	90	85.550	Vicugna_pacos
ENSUAMG00000000223	CELF1	100	100.000	ENSVVUG00000023439	CELF1	90	100.000	Vulpes_vulpes
ENSUAMG00000000223	CELF1	94	86.577	ENSXETG00000009044	celf1	90	85.682	Xenopus_tropicalis
ENSUAMG00000000223	CELF1	90	65.763	ENSXCOG00000017706	-	80	65.993	Xiphophorus_couchianus
ENSUAMG00000000223	CELF1	94	70.252	ENSXMAG00000029339	-	89	68.879	Xiphophorus_maculatus