EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUAMG00000000303 (Gene tree)
Gene ID
-
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Plus strand
Length
16732 bases
Position
chrLZNR01004107.1:81159-97890
Accession
8557
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000000264PABPPF00658.182e-3111
ENSUAMP00000000255PABPPF00658.182.2e-3111
ENSUAMP00000000264RRM_5PF13893.63.2e-0912
ENSUAMP00000000264RRM_5PF13893.63.2e-0922
ENSUAMP00000000255RRM_5PF13893.64e-0912
ENSUAMP00000000255RRM_5PF13893.64e-0922
ENSUAMP00000000264RRM_1PF00076.223.7e-9214
ENSUAMP00000000264RRM_1PF00076.223.7e-9224
ENSUAMP00000000264RRM_1PF00076.223.7e-9234
ENSUAMP00000000264RRM_1PF00076.223.7e-9244
ENSUAMP00000000255RRM_1PF00076.224.7e-9214
ENSUAMP00000000255RRM_1PF00076.224.7e-9224
ENSUAMP00000000255RRM_1PF00076.224.7e-9234
ENSUAMP00000000255RRM_1PF00076.224.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000000308PABPC4-2012891-ENSUAMP00000000255660 (aa)--
ENSUAMT00000000317PABPC4-2022804-ENSUAMP00000000264631 (aa)--
Gene Model
Click here to download ENSUAMG00000000303's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000000303's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUAMG00000000303PABPC45867.039ENSUAMG00000013627PABPC59666.849
ENSUAMG00000000303PABPC45736.905ENSUAMG00000009532TIAL18636.905
ENSUAMG00000000303PABPC45930.625ENSUAMG00000013026ELAVL49030.625
ENSUAMG00000000303PABPC45876.650ENSUAMG00000008089-9976.650
ENSUAMG00000000303PABPC46236.111ENSUAMG00000000405ELAVL39233.735
ENSUAMG00000000303PABPC49978.471ENSUAMG00000024428PABPC19978.339
ENSUAMG00000000303PABPC49745.251ENSUAMG00000022453-9745.251
ENSUAMG00000000303PABPC46374.054ENSUAMG00000001289PABPC4L9974.054
ENSUAMG00000000303PABPC45931.579ENSUAMG00000018679ELAVL28934.940
ENSUAMG00000000303PABPC49963.975ENSUAMG00000017682PABPC1L9965.032
ENSUAMG00000000303PABPC45730.370ENSUAMG00000025833TIA17030.370
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000000303PABPC410099.049ENSG00000090621PABPC4100100.000Homo_sapiens
ENSUAMG00000000303PABPC49983.043ENSAPOG00000001161pabpc410083.281Acanthochromis_polyacanthus
ENSUAMG00000000303PABPC49857.235ENSAMEG00000015083-9956.913Ailuropoda_melanoleuca
ENSUAMG00000000303PABPC410099.697ENSAMEG00000011535-10099.697Ailuropoda_melanoleuca
ENSUAMG00000000303PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSUAMG00000000303PABPC49983.518ENSAOCG00000021529pabpc410083.750Amphiprion_ocellaris
ENSUAMG00000000303PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSUAMG00000000303PABPC49982.622ENSATEG00000007402pabpc410082.071Anabas_testudineus
ENSUAMG00000000303PABPC49991.587ENSAPLG00000009729-10091.587Anas_platyrhynchos
ENSUAMG00000000303PABPC49989.982ENSACAG00000002544PABPC410089.982Anolis_carolinensis
ENSUAMG00000000303PABPC410098.891ENSANAG00000025079PABPC410098.891Aotus_nancymaae
ENSUAMG00000000303PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSUAMG00000000303PABPC49978.922ENSAMXG00000018779pabpc49979.715Astyanax_mexicanus
ENSUAMG00000000303PABPC410096.520ENSBTAG00000017125PABPC410096.520Bos_taurus
ENSUAMG00000000303PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSUAMG00000000303PABPC410098.732ENSCJAG00000002512-10098.732Callithrix_jacchus
ENSUAMG00000000303PABPC47789.344ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSUAMG00000000303PABPC410099.842ENSCAFG00000003081PABPC410099.842Canis_familiaris
ENSUAMG00000000303PABPC410099.848ENSCAFG00020004161PABPC410099.848Canis_lupus_dingo
ENSUAMG00000000303PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSUAMG00000000303PABPC410076.364ENSCHIG00000023385-10076.364Capra_hircus
ENSUAMG00000000303PABPC410099.366ENSTSYG00000006532PABPC410099.366Carlito_syrichta
ENSUAMG00000000303PABPC49998.728ENSCAPG00000015984PABPC410098.728Cavia_aperea
ENSUAMG00000000303PABPC410098.732ENSCPOG00000009552PABPC410098.732Cavia_porcellus
ENSUAMG00000000303PABPC410098.891ENSCCAG00000037306PABPC410098.891Cebus_capucinus
ENSUAMG00000000303PABPC410099.208ENSCATG00000042164PABPC410099.208Cercocebus_atys
ENSUAMG00000000303PABPC410098.891ENSCLAG00000011899PABPC410098.891Chinchilla_lanigera
ENSUAMG00000000303PABPC410099.091ENSCSAG00000001135PABPC410099.091Chlorocebus_sabaeus
ENSUAMG00000000303PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSUAMG00000000303PABPC49991.905ENSCPBG00000001038PABPC410091.905Chrysemys_picta_bellii
ENSUAMG00000000303PABPC49999.035ENSCANG00000034177PABPC410099.035Colobus_angolensis_palliatus
ENSUAMG00000000303PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSUAMG00000000303PABPC49995.115ENSCGRG00000009777Pabpc410095.115Cricetulus_griseus_crigri
ENSUAMG00000000303PABPC410082.500ENSCSEG00000000130pabpc410083.125Cynoglossus_semilaevis
ENSUAMG00000000303PABPC49983.784ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSUAMG00000000303PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSUAMG00000000303PABPC49999.464ENSDNOG00000018444-10099.464Dasypus_novemcinctus
ENSUAMG00000000303PABPC410096.515ENSDORG00000011581Pabpc410096.515Dipodomys_ordii
ENSUAMG00000000303PABPC48664.815ENSETEG00000009172-9964.835Echinops_telfairi
ENSUAMG00000000303PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSUAMG00000000303PABPC49976.741ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSUAMG00000000303PABPC49776.898ENSEBUG00000013782pabpc49976.266Eptatretus_burgeri
ENSUAMG00000000303PABPC410099.394ENSEASG00005014119PABPC410099.394Equus_asinus_asinus
ENSUAMG00000000303PABPC410099.394ENSECAG00000009396PABPC410099.394Equus_caballus
ENSUAMG00000000303PABPC410095.909ENSEEUG00000002962PABPC410095.909Erinaceus_europaeus
ENSUAMG00000000303PABPC49983.758ENSELUG00000003195pabpc49884.335Esox_lucius
ENSUAMG00000000303PABPC410099.842ENSFCAG00000015254-10099.842Felis_catus
ENSUAMG00000000303PABPC49991.111ENSFALG00000000543PABPC410091.111Ficedula_albicollis
ENSUAMG00000000303PABPC49066.667ENSFDAG00000010581-10062.689Fukomys_damarensis
ENSUAMG00000000303PABPC410098.939ENSFDAG00000020016-10098.939Fukomys_damarensis
ENSUAMG00000000303PABPC410083.568ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSUAMG00000000303PABPC49982.808ENSGMOG00000019025pabpc49983.438Gadus_morhua
ENSUAMG00000000303PABPC49992.063ENSGALG00000003800PABPC410092.063Gallus_gallus
ENSUAMG00000000303PABPC410082.915ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSUAMG00000000303PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSUAMG00000000303PABPC49991.746ENSGAGG00000001888PABPC410091.746Gopherus_agassizii
ENSUAMG00000000303PABPC410099.049ENSGGOG00000004002PABPC410099.049Gorilla_gorilla
ENSUAMG00000000303PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSUAMG00000000303PABPC410099.208ENSHGLG00000011162PABPC410099.208Heterocephalus_glaber_female
ENSUAMG00000000303PABPC410099.208ENSHGLG00100001580PABPC410099.208Heterocephalus_glaber_male
ENSUAMG00000000303PABPC410082.160ENSHCOG00000012694pabpc410082.812Hippocampus_comes
ENSUAMG00000000303PABPC49883.307ENSIPUG00000016620pabpc49983.333Ictalurus_punctatus
ENSUAMG00000000303PABPC410096.672ENSSTOG00000010416PABPC410096.672Ictidomys_tridecemlineatus
ENSUAMG00000000303PABPC410094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSUAMG00000000303PABPC49991.076ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSUAMG00000000303PABPC410082.426ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSUAMG00000000303PABPC49988.013ENSLACG00000011907PABPC410088.013Latimeria_chalumnae
ENSUAMG00000000303PABPC49985.827ENSLOCG00000001877pabpc49986.614Lepisosteus_oculatus
ENSUAMG00000000303PABPC410099.394ENSLAFG00000000151PABPC410099.394Loxodonta_africana
ENSUAMG00000000303PABPC410099.208ENSMFAG00000041481PABPC410099.208Macaca_fascicularis
ENSUAMG00000000303PABPC410099.091ENSMMUG00000007497PABPC410099.091Macaca_mulatta
ENSUAMG00000000303PABPC410099.049ENSMNEG00000043054PABPC410099.049Macaca_nemestrina
ENSUAMG00000000303PABPC410099.208ENSMLEG00000040716PABPC410099.208Mandrillus_leucophaeus
ENSUAMG00000000303PABPC49982.884ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSUAMG00000000303PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSUAMG00000000303PABPC49988.075ENSMGAG00000005408PABPC410088.075Meleagris_gallopavo
ENSUAMG00000000303PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSUAMG00000000303PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSUAMG00000000303PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSUAMG00000000303PABPC49981.528ENSMICG00000036729-10085.258Microcebus_murinus
ENSUAMG00000000303PABPC48996.263ENSMICG00000016633-10096.263Microcebus_murinus
ENSUAMG00000000303PABPC410097.638ENSMOCG00000006763Pabpc410097.638Microtus_ochrogaster
ENSUAMG00000000303PABPC410080.503ENSMMOG00000002363pabpc49981.790Mola_mola
ENSUAMG00000000303PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSUAMG00000000303PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSUAMG00000000303PABPC49982.780ENSMALG00000011017pabpc410082.481Monopterus_albus
ENSUAMG00000000303PABPC410097.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSUAMG00000000303PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSUAMG00000000303PABPC410097.940ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSUAMG00000000303PABPC49997.542MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSUAMG00000000303PABPC49978.603MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSUAMG00000000303PABPC49553.311ENSMPUG00000006836-10053.146Mustela_putorius_furo
ENSUAMG00000000303PABPC410099.697ENSMPUG00000014414-10099.697Mustela_putorius_furo
ENSUAMG00000000303PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSUAMG00000000303PABPC410096.672ENSNGAG00000018292Pabpc410096.672Nannospalax_galili
ENSUAMG00000000303PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSUAMG00000000303PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSUAMG00000000303PABPC410099.208ENSNLEG00000011928PABPC410099.208Nomascus_leucogenys
ENSUAMG00000000303PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSUAMG00000000303PABPC410098.415ENSODEG00000006592-10098.415Octodon_degus
ENSUAMG00000000303PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSUAMG00000000303PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSUAMG00000000303PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSUAMG00000000303PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSUAMG00000000303PABPC49698.734ENSOCUG00000000562PABPC48898.734Oryctolagus_cuniculus
ENSUAMG00000000303PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSUAMG00000000303PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSUAMG00000000303PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSUAMG00000000303PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSUAMG00000000303PABPC410096.531ENSOGAG00000004067PABPC410096.531Otolemur_garnettii
ENSUAMG00000000303PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSUAMG00000000303PABPC410099.049ENSPPAG00000043625PABPC410099.049Pan_paniscus
ENSUAMG00000000303PABPC410099.842ENSPPRG00000024727PABPC410099.842Panthera_pardus
ENSUAMG00000000303PABPC410099.842ENSPTIG00000005829PABPC410099.842Panthera_tigris_altaica
ENSUAMG00000000303PABPC410099.049ENSPTRG00000000573PABPC410099.049Pan_troglodytes
ENSUAMG00000000303PABPC410099.366ENSPANG00000009484PABPC410099.366Papio_anubis
ENSUAMG00000000303PABPC49984.968ENSPKIG00000025356pabpc49985.601Paramormyrops_kingsleyae
ENSUAMG00000000303PABPC49991.905ENSPSIG00000016892PABPC410091.905Pelodiscus_sinensis
ENSUAMG00000000303PABPC410081.575ENSPMGG00000009073pabpc49980.818Periophthalmus_magnuspinnatus
ENSUAMG00000000303PABPC410097.147ENSPEMG00000023569-9997.147Peromyscus_maniculatus_bairdii
ENSUAMG00000000303PABPC410091.024ENSPEMG00000024193-9991.024Peromyscus_maniculatus_bairdii
ENSUAMG00000000303PABPC48973.657ENSPMAG00000002836pabpc410074.003Petromyzon_marinus
ENSUAMG00000000303PABPC49771.311ENSPMAG00000007885pabpc410069.625Petromyzon_marinus
ENSUAMG00000000303PABPC49794.033ENSPCIG00000020674PABPC410094.033Phascolarctos_cinereus
ENSUAMG00000000303PABPC410082.942ENSPFOG00000002682pabpc410084.038Poecilia_formosa
ENSUAMG00000000303PABPC410082.786ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSUAMG00000000303PABPC49983.466ENSPMEG00000019739pabpc410084.194Poecilia_mexicana
ENSUAMG00000000303PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSUAMG00000000303PABPC410098.939ENSPPYG00000001506PABPC410098.939Pongo_abelii
ENSUAMG00000000303PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSUAMG00000000303PABPC410099.209ENSPCOG00000023725-10099.209Propithecus_coquereli
ENSUAMG00000000303PABPC49981.494ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSUAMG00000000303PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSUAMG00000000303PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSUAMG00000000303PABPC410083.412ENSPNAG00000024355pabpc410083.956Pygocentrus_nattereri
ENSUAMG00000000303PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSUAMG00000000303PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSUAMG00000000303PABPC410099.208ENSRBIG00000039761PABPC410099.208Rhinopithecus_bieti
ENSUAMG00000000303PABPC410099.208ENSRROG00000033355PABPC410099.208Rhinopithecus_roxellana
ENSUAMG00000000303PABPC410099.049ENSSBOG00000026193PABPC410099.049Saimiri_boliviensis_boliviensis
ENSUAMG00000000303PABPC49892.395ENSSHAG00000018139PABPC410091.905Sarcophilus_harrisii
ENSUAMG00000000303PABPC49985.878ENSSFOG00015023514pabpc49985.878Scleropages_formosus
ENSUAMG00000000303PABPC49982.437ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSUAMG00000000303PABPC49982.726ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSUAMG00000000303PABPC49982.726ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSUAMG00000000303PABPC410091.667ENSSARG00000000310PABPC410091.667Sorex_araneus
ENSUAMG00000000303PABPC49990.159ENSSPUG00000003204PABPC410090.159Sphenodon_punctatus
ENSUAMG00000000303PABPC49983.043ENSSPAG00000009252pabpc49983.176Stegastes_partitus
ENSUAMG00000000303PABPC410099.366ENSSSCG00000003660-10099.366Sus_scrofa
ENSUAMG00000000303PABPC48950.673ENSSSCG00000036170-9650.673Sus_scrofa
ENSUAMG00000000303PABPC49987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSUAMG00000000303PABPC410082.233ENSTRUG00000005907pabpc49982.862Takifugu_rubripes
ENSUAMG00000000303PABPC410078.391ENSTNIG00000016902pabpc49978.391Tetraodon_nigroviridis
ENSUAMG00000000303PABPC49987.899ENSTBEG00000009035PABPC410087.899Tupaia_belangeri
ENSUAMG00000000303PABPC49983.525ENSTTRG00000014340PABPC410087.227Tursiops_truncatus
ENSUAMG00000000303PABPC410099.697ENSUMAG00000019585PABPC410099.697Ursus_maritimus
ENSUAMG00000000303PABPC48497.163ENSVPAG00000010041PABPC47797.163Vicugna_pacos
ENSUAMG00000000303PABPC410099.848ENSVVUG00000005215PABPC410099.848Vulpes_vulpes
ENSUAMG00000000303PABPC49983.333ENSXETG00000010946pabpc410083.333Xenopus_tropicalis
ENSUAMG00000000303PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSUAMG00000000303PABPC49981.282ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSUAMG00000000303PABPC410083.099ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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