EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000000814 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 7840 bases
Position: chrLZNR01003161.1:108901-116740
Accession: 6919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000000824	MBD	PF01429.19	8.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000000945	MBD4-201	2134	-	ENSUAMP00000000824	491 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000000814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000000814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000000814	MBD4	99	80.838	ENSG00000129071	MBD4	98	73.946	Homo_sapiens
ENSUAMG00000000814	MBD4	99	41.785	ENSAPOG00000021668	mbd4	95	41.785	Acanthochromis_polyacanthus
ENSUAMG00000000814	MBD4	100	96.334	ENSAMEG00000004562	MBD4	86	96.334	Ailuropoda_melanoleuca
ENSUAMG00000000814	MBD4	99	41.165	ENSAOCG00000001157	mbd4	95	42.829	Amphiprion_ocellaris
ENSUAMG00000000814	MBD4	99	43.222	ENSAPEG00000016131	mbd4	95	43.222	Amphiprion_percula
ENSUAMG00000000814	MBD4	100	72.967	ENSBTAG00000021645	MBD4	87	72.967	Bos_taurus
ENSUAMG00000000814	MBD4	99	77.959	ENSCJAG00000017293	MBD4	86	77.959	Callithrix_jacchus
ENSUAMG00000000814	MBD4	100	88.664	ENSCAFG00000004867	MBD4	87	88.664	Canis_familiaris
ENSUAMG00000000814	MBD4	100	88.664	ENSCAFG00020007082	MBD4	87	88.664	Canis_lupus_dingo
ENSUAMG00000000814	MBD4	100	73.374	ENSCHIG00000009760	MBD4	87	73.374	Capra_hircus
ENSUAMG00000000814	MBD4	99	78.112	ENSCCAG00000029796	MBD4	86	78.112	Cebus_capucinus
ENSUAMG00000000814	MBD4	99	78.557	ENSCATG00000035211	MBD4	86	78.557	Cercocebus_atys
ENSUAMG00000000814	MBD4	100	73.000	ENSCLAG00000008974	MBD4	88	73.000	Chinchilla_lanigera
ENSUAMG00000000814	MBD4	99	78.557	ENSCSAG00000009037	MBD4	86	78.557	Chlorocebus_sabaeus
ENSUAMG00000000814	MBD4	99	50.977	ENSCPBG00000014704	MBD4	89	50.977	Chrysemys_picta_bellii
ENSUAMG00000000814	MBD4	99	78.557	ENSCANG00000007120	MBD4	86	78.557	Colobus_angolensis_palliatus
ENSUAMG00000000814	MBD4	100	68.485	ENSCGRG00001003507	Mbd4	88	68.485	Cricetulus_griseus_chok1gshd
ENSUAMG00000000814	MBD4	100	68.485	ENSCGRG00000010974	Mbd4	88	68.485	Cricetulus_griseus_crigri
ENSUAMG00000000814	MBD4	100	78.000	ENSDNOG00000049619	MBD4	87	78.000	Dasypus_novemcinctus
ENSUAMG00000000814	MBD4	88	63.182	ENSDORG00000000902	-	90	63.182	Dipodomys_ordii
ENSUAMG00000000814	MBD4	100	81.162	ENSEASG00005014800	MBD4	87	81.162	Equus_asinus_asinus
ENSUAMG00000000814	MBD4	100	81.363	ENSECAG00000022106	MBD4	87	81.363	Equus_caballus
ENSUAMG00000000814	MBD4	95	67.158	ENSEEUG00000011459	MBD4	88	67.158	Erinaceus_europaeus
ENSUAMG00000000814	MBD4	100	88.235	ENSFCAG00000000083	MBD4	86	88.235	Felis_catus
ENSUAMG00000000814	MBD4	94	44.468	ENSFALG00000013663	MBD4	99	44.650	Ficedula_albicollis
ENSUAMG00000000814	MBD4	98	40.650	ENSGMOG00000013830	mbd4	100	40.650	Gadus_morhua
ENSUAMG00000000814	MBD4	99	50.977	ENSGAGG00000018644	MBD4	89	50.977	Gopherus_agassizii
ENSUAMG00000000814	MBD4	99	79.641	ENSGGOG00000010698	MBD4	86	79.641	Gorilla_gorilla
ENSUAMG00000000814	MBD4	100	74.400	ENSHGLG00000009034	MBD4	88	74.400	Heterocephalus_glaber_female
ENSUAMG00000000814	MBD4	100	74.600	ENSHGLG00100000135	MBD4	88	74.600	Heterocephalus_glaber_male
ENSUAMG00000000814	MBD4	100	73.600	ENSSTOG00000020663	MBD4	87	73.600	Ictidomys_tridecemlineatus
ENSUAMG00000000814	MBD4	99	76.400	ENSLAFG00000010609	MBD4	86	76.400	Loxodonta_africana
ENSUAMG00000000814	MBD4	99	78.357	ENSMFAG00000002266	MBD4	86	78.357	Macaca_fascicularis
ENSUAMG00000000814	MBD4	99	78.044	ENSMMUG00000012723	MBD4	86	78.044	Macaca_mulatta
ENSUAMG00000000814	MBD4	95	77.358	ENSMNEG00000029752	MBD4	85	77.358	Macaca_nemestrina
ENSUAMG00000000814	MBD4	99	78.557	ENSMLEG00000024859	MBD4	86	78.557	Mandrillus_leucophaeus
ENSUAMG00000000814	MBD4	100	78.800	ENSMICG00000008022	MBD4	86	78.800	Microcebus_murinus
ENSUAMG00000000814	MBD4	61	50.000	ENSMOCG00000002466	-	76	50.000	Microtus_ochrogaster
ENSUAMG00000000814	MBD4	99	60.521	ENSMODG00000006399	-	99	60.521	Monodelphis_domestica
ENSUAMG00000000814	MBD4	99	69.461	MGP_CAROLIEiJ_G0028760	Mbd4	88	69.461	Mus_caroli
ENSUAMG00000000814	MBD4	99	69.461	ENSMUSG00000030322	Mbd4	88	69.461	Mus_musculus
ENSUAMG00000000814	MBD4	99	69.739	MGP_PahariEiJ_G0022511	-	87	69.739	Mus_pahari
ENSUAMG00000000814	MBD4	99	69.461	MGP_SPRETEiJ_G0029788	Mbd4	88	69.461	Mus_spretus
ENSUAMG00000000814	MBD4	100	88.235	ENSMPUG00000017195	MBD4	87	88.235	Mustela_putorius_furo
ENSUAMG00000000814	MBD4	100	83.400	ENSMLUG00000014766	MBD4	92	83.400	Myotis_lucifugus
ENSUAMG00000000814	MBD4	99	80.561	ENSNLEG00000005337	MBD4	86	80.561	Nomascus_leucogenys
ENSUAMG00000000814	MBD4	100	65.868	ENSOPRG00000000473	MBD4	86	65.868	Ochotona_princeps
ENSUAMG00000000814	MBD4	77	46.429	ENSOANG00000004589	-	89	46.429	Ornithorhynchus_anatinus
ENSUAMG00000000814	MBD4	100	68.056	ENSOCUG00000013006	MBD4	87	68.056	Oryctolagus_cuniculus
ENSUAMG00000000814	MBD4	100	73.347	ENSOGAG00000010236	MBD4	87	73.347	Otolemur_garnettii
ENSUAMG00000000814	MBD4	100	73.577	ENSOARG00000014699	MBD4	87	73.577	Ovis_aries
ENSUAMG00000000814	MBD4	99	79.840	ENSPPAG00000036528	MBD4	86	79.840	Pan_paniscus
ENSUAMG00000000814	MBD4	100	86.410	ENSPPRG00000016480	MBD4	86	86.410	Panthera_pardus
ENSUAMG00000000814	MBD4	99	80.240	ENSPTRG00000015377	MBD4	86	80.240	Pan_troglodytes
ENSUAMG00000000814	MBD4	99	79.559	ENSPANG00000015047	MBD4	86	79.559	Papio_anubis
ENSUAMG00000000814	MBD4	99	51.544	ENSPSIG00000007892	MBD4	88	51.544	Pelodiscus_sinensis
ENSUAMG00000000814	MBD4	93	61.670	ENSPEMG00000006226	Mbd4	87	61.884	Peromyscus_maniculatus_bairdii
ENSUAMG00000000814	MBD4	100	58.964	ENSPCIG00000002276	-	95	58.964	Phascolarctos_cinereus
ENSUAMG00000000814	MBD4	99	80.200	ENSPPYG00000013417	MBD4	86	80.200	Pongo_abelii
ENSUAMG00000000814	MBD4	95	72.899	ENSPCAG00000012915	MBD4	86	72.899	Procavia_capensis
ENSUAMG00000000814	MBD4	100	83.200	ENSPVAG00000005238	MBD4	87	83.200	Pteropus_vampyrus
ENSUAMG00000000814	MBD4	100	67.729	ENSRNOG00000010919	Mbd4	88	67.729	Rattus_norvegicus
ENSUAMG00000000814	MBD4	99	78.958	ENSRBIG00000027722	MBD4	86	78.958	Rhinopithecus_bieti
ENSUAMG00000000814	MBD4	99	78.758	ENSRROG00000029136	MBD4	86	78.758	Rhinopithecus_roxellana
ENSUAMG00000000814	MBD4	99	78.226	ENSSBOG00000016810	MBD4	86	78.226	Saimiri_boliviensis_boliviensis
ENSUAMG00000000814	MBD4	100	58.882	ENSSHAG00000012953	MBD4	87	58.882	Sarcophilus_harrisii
ENSUAMG00000000814	MBD4	99	43.089	ENSSFOG00015016292	mbd4	95	43.089	Scleropages_formosus
ENSUAMG00000000814	MBD4	93	61.456	ENSSARG00000004496	-	80	61.456	Sorex_araneus
ENSUAMG00000000814	MBD4	99	52.642	ENSSPUG00000017344	MBD4	91	52.642	Sphenodon_punctatus
ENSUAMG00000000814	MBD4	100	78.600	ENSSSCG00000033303	MBD4	87	78.600	Sus_scrofa
ENSUAMG00000000814	MBD4	86	61.468	ENSTBEG00000003041	-	74	61.468	Tupaia_belangeri
ENSUAMG00000000814	MBD4	100	80.000	ENSTTRG00000011265	MBD4	89	80.000	Tursiops_truncatus
ENSUAMG00000000814	MBD4	100	99.185	ENSUMAG00000017542	MBD4	87	99.185	Ursus_maritimus
ENSUAMG00000000814	MBD4	59	76.596	ENSVPAG00000004040	-	54	76.596	Vicugna_pacos
ENSUAMG00000000814	MBD4	100	88.259	ENSVVUG00000014222	MBD4	87	88.259	Vulpes_vulpes
ENSUAMG00000000814	MBD4	99	43.863	ENSXETG00000026622	mbd4	89	43.863	Xenopus_tropicalis