EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000000978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 381 bases
Position: chrLZNR01002580.1:2596-2976
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000000999	RRM_1	PF00076.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000001148	-	381	-	ENSUAMP00000000999	126 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000000978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000000978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000000978	-	100	81.746	ENSUAMG00000025329	SF3B6	100	81.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000000978	-	100	81.746	ENSG00000115128	SF3B6	100	81.746	Homo_sapiens
ENSUAMG00000000978	-	100	80.159	ENSAPOG00000023788	sf3b6	100	80.159	Acanthochromis_polyacanthus
ENSUAMG00000000978	-	100	81.746	ENSAMEG00000002786	SF3B6	100	81.746	Ailuropoda_melanoleuca
ENSUAMG00000000978	-	100	80.159	ENSACIG00000012608	sf3b6	100	80.159	Amphilophus_citrinellus
ENSUAMG00000000978	-	100	80.159	ENSAOCG00000013394	sf3b6	100	80.159	Amphiprion_ocellaris
ENSUAMG00000000978	-	100	80.159	ENSAPEG00000015311	sf3b6	100	80.159	Amphiprion_percula
ENSUAMG00000000978	-	100	80.159	ENSATEG00000016569	sf3b6	100	80.159	Anabas_testudineus
ENSUAMG00000000978	-	100	81.746	ENSACAG00000011677	SF3B6	100	81.746	Anolis_carolinensis
ENSUAMG00000000978	-	100	81.746	ENSANAG00000027284	SF3B6	95	81.746	Aotus_nancymaae
ENSUAMG00000000978	-	100	80.159	ENSACLG00000007793	sf3b6	100	80.159	Astatotilapia_calliptera
ENSUAMG00000000978	-	100	81.746	ENSAMXG00000034888	sf3b6	100	81.746	Astyanax_mexicanus
ENSUAMG00000000978	-	100	80.952	ENSBTAG00000049128	-	100	80.952	Bos_taurus
ENSUAMG00000000978	-	100	81.746	ENSBTAG00000003407	SF3B6	100	81.746	Bos_taurus
ENSUAMG00000000978	-	100	53.968	WBGene00016808	C50D2.5	91	53.968	Caenorhabditis_elegans
ENSUAMG00000000978	-	100	81.746	ENSCJAG00000007716	SF3B6	100	81.746	Callithrix_jacchus
ENSUAMG00000000978	-	100	81.746	ENSCAFG00000003957	SF3B6	100	81.746	Canis_familiaris
ENSUAMG00000000978	-	100	81.746	ENSCAFG00020025576	SF3B6	100	81.746	Canis_lupus_dingo
ENSUAMG00000000978	-	100	81.746	ENSCHIG00000009902	SF3B6	100	81.746	Capra_hircus
ENSUAMG00000000978	-	100	81.746	ENSTSYG00000013978	SF3B6	100	81.746	Carlito_syrichta
ENSUAMG00000000978	-	97	78.689	ENSCAPG00000016302	SF3B6	99	78.689	Cavia_aperea
ENSUAMG00000000978	-	100	81.746	ENSCPOG00000008016	SF3B6	100	81.746	Cavia_porcellus
ENSUAMG00000000978	-	99	76.800	ENSCCAG00000018894	-	96	76.800	Cebus_capucinus
ENSUAMG00000000978	-	100	81.746	ENSCCAG00000036653	SF3B6	100	81.746	Cebus_capucinus
ENSUAMG00000000978	-	100	81.746	ENSCATG00000030936	SF3B6	100	81.746	Cercocebus_atys
ENSUAMG00000000978	-	100	81.746	ENSCLAG00000014512	SF3B6	100	81.746	Chinchilla_lanigera
ENSUAMG00000000978	-	100	81.746	ENSCSAG00000008390	SF3B6	100	81.746	Chlorocebus_sabaeus
ENSUAMG00000000978	-	99	63.200	ENSCHOG00000013886	-	99	63.200	Choloepus_hoffmanni
ENSUAMG00000000978	-	100	81.746	ENSCHOG00000000689	SF3B6	100	81.746	Choloepus_hoffmanni
ENSUAMG00000000978	-	100	81.746	ENSCPBG00000020042	SF3B6	100	81.746	Chrysemys_picta_bellii
ENSUAMG00000000978	-	98	65.323	ENSCING00000012689	-	97	65.323	Ciona_intestinalis
ENSUAMG00000000978	-	100	81.746	ENSCANG00000030559	SF3B6	100	81.746	Colobus_angolensis_palliatus
ENSUAMG00000000978	-	100	81.746	ENSCGRG00001014595	Sf3b6	100	81.746	Cricetulus_griseus_chok1gshd
ENSUAMG00000000978	-	100	81.746	ENSCGRG00000005272	Sf3b6	100	81.746	Cricetulus_griseus_crigri
ENSUAMG00000000978	-	100	79.365	ENSCSEG00000019017	sf3b6	100	79.365	Cynoglossus_semilaevis
ENSUAMG00000000978	-	100	80.952	ENSCVAG00000005055	sf3b6	100	80.952	Cyprinodon_variegatus
ENSUAMG00000000978	-	100	81.746	ENSDARG00000009753	sf3b6	100	81.746	Danio_rerio
ENSUAMG00000000978	-	100	81.746	ENSDNOG00000007148	SF3B6	100	81.746	Dasypus_novemcinctus
ENSUAMG00000000978	-	99	70.079	ENSDORG00000029761	-	98	70.079	Dipodomys_ordii
ENSUAMG00000000978	-	100	81.746	ENSDORG00000009772	Sf3b6	100	81.746	Dipodomys_ordii
ENSUAMG00000000978	-	99	70.079	ENSDORG00000027390	-	98	70.079	Dipodomys_ordii
ENSUAMG00000000978	-	92	61.207	FBgn0035692	Sf3b6	95	61.207	Drosophila_melanogaster
ENSUAMG00000000978	-	92	76.724	ENSEBUG00000004424	sf3b6	91	76.724	Eptatretus_burgeri
ENSUAMG00000000978	-	100	81.746	ENSEASG00005009993	SF3B6	100	81.746	Equus_asinus_asinus
ENSUAMG00000000978	-	100	71.429	ENSEASG00005008061	-	100	73.810	Equus_asinus_asinus
ENSUAMG00000000978	-	75	80.000	ENSECAG00000015618	SF3B6	87	80.000	Equus_caballus
ENSUAMG00000000978	-	75	71.579	ENSECAG00000027755	-	81	71.579	Equus_caballus
ENSUAMG00000000978	-	100	80.159	ENSELUG00000010379	sf3b6	100	80.159	Esox_lucius
ENSUAMG00000000978	-	100	81.746	ENSFCAG00000031365	SF3B6	100	81.746	Felis_catus
ENSUAMG00000000978	-	100	81.746	ENSFALG00000001651	SF3B6	100	81.746	Ficedula_albicollis
ENSUAMG00000000978	-	100	81.746	ENSFDAG00000007864	SF3B6	100	81.746	Fukomys_damarensis
ENSUAMG00000000978	-	100	80.952	ENSFHEG00000000685	sf3b6	100	80.952	Fundulus_heteroclitus
ENSUAMG00000000978	-	100	79.365	ENSGMOG00000005123	sf3b6	100	79.365	Gadus_morhua
ENSUAMG00000000978	-	73	80.435	ENSGALG00000016501	SF3B6	100	80.435	Gallus_gallus
ENSUAMG00000000978	-	100	80.159	ENSGAFG00000009334	sf3b6	100	80.159	Gambusia_affinis
ENSUAMG00000000978	-	100	79.365	ENSGACG00000004803	sf3b6	100	79.365	Gasterosteus_aculeatus
ENSUAMG00000000978	-	100	81.746	ENSGAGG00000012240	SF3B6	100	81.746	Gopherus_agassizii
ENSUAMG00000000978	-	100	81.746	ENSGGOG00000040806	SF3B6	100	81.746	Gorilla_gorilla
ENSUAMG00000000978	-	100	80.159	ENSHBUG00000012556	sf3b6	100	80.159	Haplochromis_burtoni
ENSUAMG00000000978	-	100	81.746	ENSHGLG00000014895	SF3B14	100	81.746	Heterocephalus_glaber_female
ENSUAMG00000000978	-	100	81.746	ENSHGLG00100008639	SF3B14	100	81.746	Heterocephalus_glaber_male
ENSUAMG00000000978	-	100	80.952	ENSHCOG00000019962	sf3b6	100	80.952	Hippocampus_comes
ENSUAMG00000000978	-	100	81.746	ENSIPUG00000023800	sf3b6	100	81.746	Ictalurus_punctatus
ENSUAMG00000000978	-	100	81.746	ENSJJAG00000021819	Sf3b6	100	81.746	Jaculus_jaculus
ENSUAMG00000000978	-	100	80.159	ENSKMAG00000004000	sf3b6	100	80.159	Kryptolebias_marmoratus
ENSUAMG00000000978	-	100	80.159	ENSLBEG00000022937	sf3b6	100	80.159	Labrus_bergylta
ENSUAMG00000000978	-	100	81.746	ENSLACG00000014326	SF3B6	100	81.746	Latimeria_chalumnae
ENSUAMG00000000978	-	100	81.746	ENSLOCG00000016481	sf3b6	100	81.746	Lepisosteus_oculatus
ENSUAMG00000000978	-	100	81.746	ENSLAFG00000029423	SF3B6	100	81.746	Loxodonta_africana
ENSUAMG00000000978	-	100	81.746	ENSMFAG00000038178	SF3B6	100	81.746	Macaca_fascicularis
ENSUAMG00000000978	-	100	81.746	ENSMMUG00000001282	SF3B6	100	81.746	Macaca_mulatta
ENSUAMG00000000978	-	100	81.746	ENSMNEG00000029050	SF3B6	100	81.746	Macaca_nemestrina
ENSUAMG00000000978	-	100	81.746	ENSMLEG00000019896	SF3B6	100	81.746	Mandrillus_leucophaeus
ENSUAMG00000000978	-	75	77.895	ENSMAMG00000007713	sf3b6	86	77.895	Mastacembelus_armatus
ENSUAMG00000000978	-	100	80.159	ENSMZEG00005003557	sf3b6	100	80.159	Maylandia_zebra
ENSUAMG00000000978	-	100	81.746	ENSMGAG00000014057	SF3B6	100	81.746	Meleagris_gallopavo
ENSUAMG00000000978	-	100	81.746	ENSMAUG00000000586	-	100	81.746	Mesocricetus_auratus
ENSUAMG00000000978	-	100	81.746	ENSMICG00000032874	SF3B6	100	81.746	Microcebus_murinus
ENSUAMG00000000978	-	100	81.746	ENSMOCG00000014338	Sf3b6	100	81.746	Microtus_ochrogaster
ENSUAMG00000000978	-	100	80.952	ENSMMOG00000015653	sf3b6	100	80.952	Mola_mola
ENSUAMG00000000978	-	100	76.984	ENSMODG00000002144	SF3B6	100	76.984	Monodelphis_domestica
ENSUAMG00000000978	-	100	80.952	ENSMALG00000019642	sf3b6	67	80.952	Monopterus_albus
ENSUAMG00000000978	-	100	81.746	MGP_CAROLIEiJ_G0017590	Sf3b6	100	81.746	Mus_caroli
ENSUAMG00000000978	-	100	81.746	ENSMUSG00000037361	Sf3b6	100	81.746	Mus_musculus
ENSUAMG00000000978	-	100	81.746	MGP_PahariEiJ_G0029348	Sf3b6	100	81.746	Mus_pahari
ENSUAMG00000000978	-	100	81.746	MGP_SPRETEiJ_G0018434	Sf3b6	100	81.746	Mus_spretus
ENSUAMG00000000978	-	100	81.746	ENSMPUG00000013957	SF3B6	100	81.746	Mustela_putorius_furo
ENSUAMG00000000978	-	100	80.159	ENSMLUG00000002473	SF3B6	100	80.159	Myotis_lucifugus
ENSUAMG00000000978	-	100	81.746	ENSNGAG00000020256	Sf3b6	100	81.746	Nannospalax_galili
ENSUAMG00000000978	-	100	80.159	ENSNBRG00000018244	sf3b6	100	80.159	Neolamprologus_brichardi
ENSUAMG00000000978	-	100	81.746	ENSNLEG00000000815	-	100	81.746	Nomascus_leucogenys
ENSUAMG00000000978	-	87	82.727	ENSODEG00000009547	SF3B6	92	82.727	Octodon_degus
ENSUAMG00000000978	-	100	80.159	ENSONIG00000001219	sf3b6	100	80.159	Oreochromis_niloticus
ENSUAMG00000000978	-	100	81.746	ENSOANG00000007627	SF3B6	100	81.746	Ornithorhynchus_anatinus
ENSUAMG00000000978	-	100	81.746	ENSOCUG00000022008	SF3B6	100	81.746	Oryctolagus_cuniculus
ENSUAMG00000000978	-	100	80.159	ENSORLG00000015955	sf3b6	100	80.159	Oryzias_latipes
ENSUAMG00000000978	-	100	80.159	ENSORLG00020005875	sf3b6	100	80.159	Oryzias_latipes_hni
ENSUAMG00000000978	-	100	80.159	ENSORLG00015001347	sf3b6	100	80.159	Oryzias_latipes_hsok
ENSUAMG00000000978	-	100	80.159	ENSOMEG00000014506	sf3b6	100	80.159	Oryzias_melastigma
ENSUAMG00000000978	-	100	81.746	ENSOGAG00000004468	SF3B6	100	81.746	Otolemur_garnettii
ENSUAMG00000000978	-	100	81.746	ENSOARG00000017819	SF3B6	100	81.746	Ovis_aries
ENSUAMG00000000978	-	100	81.746	ENSPPAG00000027816	SF3B6	100	81.746	Pan_paniscus
ENSUAMG00000000978	-	100	81.746	ENSPPRG00000023257	SF3B6	100	81.746	Panthera_pardus
ENSUAMG00000000978	-	100	81.746	ENSPTIG00000013322	SF3B6	100	81.746	Panthera_tigris_altaica
ENSUAMG00000000978	-	100	81.746	ENSPTRG00000011709	SF3B6	100	81.746	Pan_troglodytes
ENSUAMG00000000978	-	100	81.746	ENSPANG00000021963	SF3B6	100	81.746	Papio_anubis
ENSUAMG00000000978	-	100	81.746	ENSPKIG00000012311	sf3b6	100	81.746	Paramormyrops_kingsleyae
ENSUAMG00000000978	-	92	81.897	ENSPSIG00000017115	SF3B6	100	81.897	Pelodiscus_sinensis
ENSUAMG00000000978	-	75	77.895	ENSPMGG00000014621	sf3b6	79	77.895	Periophthalmus_magnuspinnatus
ENSUAMG00000000978	-	100	81.746	ENSPEMG00000010308	Sf3b6	100	81.746	Peromyscus_maniculatus_bairdii
ENSUAMG00000000978	-	94	73.109	ENSPMAG00000006008	sf3b6	94	73.109	Petromyzon_marinus
ENSUAMG00000000978	-	100	81.746	ENSPCIG00000022128	-	100	81.746	Phascolarctos_cinereus
ENSUAMG00000000978	-	99	62.400	ENSPCIG00000015858	-	99	62.400	Phascolarctos_cinereus
ENSUAMG00000000978	-	100	80.159	ENSPFOG00000012494	sf3b6	100	80.159	Poecilia_formosa
ENSUAMG00000000978	-	100	80.159	ENSPLAG00000020460	sf3b6	100	80.159	Poecilia_latipinna
ENSUAMG00000000978	-	100	80.159	ENSPMEG00000004426	sf3b6	100	80.159	Poecilia_mexicana
ENSUAMG00000000978	-	100	81.746	ENSPPYG00000012603	SF3B6	100	81.746	Pongo_abelii
ENSUAMG00000000978	-	100	81.746	ENSPVAG00000011346	SF3B6	100	81.746	Pteropus_vampyrus
ENSUAMG00000000978	-	100	80.159	ENSPNYG00000021832	sf3b6	100	80.159	Pundamilia_nyererei
ENSUAMG00000000978	-	100	81.746	ENSPNAG00000008845	sf3b6	100	81.746	Pygocentrus_nattereri
ENSUAMG00000000978	-	100	75.397	ENSRNOG00000046172	Sf3b6	100	75.397	Rattus_norvegicus
ENSUAMG00000000978	-	100	81.746	ENSRBIG00000039598	SF3B6	100	81.746	Rhinopithecus_bieti
ENSUAMG00000000978	-	100	81.746	ENSRROG00000011368	SF3B6	100	81.746	Rhinopithecus_roxellana
ENSUAMG00000000978	-	100	81.746	ENSSBOG00000002914	SF3B6	100	81.746	Saimiri_boliviensis_boliviensis
ENSUAMG00000000978	-	100	81.746	ENSSFOG00015014370	sf3b6	100	81.746	Scleropages_formosus
ENSUAMG00000000978	-	100	80.159	ENSSMAG00000004566	sf3b6	100	80.159	Scophthalmus_maximus
ENSUAMG00000000978	-	100	80.159	ENSSDUG00000006538	sf3b6	100	80.159	Seriola_dumerili
ENSUAMG00000000978	-	100	80.159	ENSSLDG00000004494	sf3b6	100	80.159	Seriola_lalandi_dorsalis
ENSUAMG00000000978	-	100	81.746	ENSSARG00000011902	-	100	81.746	Sorex_araneus
ENSUAMG00000000978	-	100	81.746	ENSSPUG00000014919	SF3B6	100	81.746	Sphenodon_punctatus
ENSUAMG00000000978	-	100	80.159	ENSSPAG00000013201	sf3b6	100	80.159	Stegastes_partitus
ENSUAMG00000000978	-	100	81.746	ENSSSCG00000008587	SF3B6	100	81.746	Sus_scrofa
ENSUAMG00000000978	-	100	81.746	ENSTGUG00000013191	SF3B6	100	81.746	Taeniopygia_guttata
ENSUAMG00000000978	-	100	80.159	ENSTRUG00000025286	sf3b6	100	80.159	Takifugu_rubripes
ENSUAMG00000000978	-	100	80.159	ENSTNIG00000009719	sf3b6	100	80.159	Tetraodon_nigroviridis
ENSUAMG00000000978	-	92	81.897	ENSTBEG00000012532	SF3B6	100	81.897	Tupaia_belangeri
ENSUAMG00000000978	-	92	81.897	ENSTTRG00000013430	SF3B6	100	81.897	Tursiops_truncatus
ENSUAMG00000000978	-	100	81.746	ENSUMAG00000022835	SF3B6	100	81.746	Ursus_maritimus
ENSUAMG00000000978	-	92	81.897	ENSVPAG00000005546	SF3B6	100	81.897	Vicugna_pacos
ENSUAMG00000000978	-	100	81.746	ENSVVUG00000010874	SF3B6	100	81.746	Vulpes_vulpes
ENSUAMG00000000978	-	100	80.952	ENSXETG00000018204	sf3b6	100	80.952	Xenopus_tropicalis
ENSUAMG00000000978	-	92	65.574	ENSXCOG00000008477	sf3b6	93	65.574	Xiphophorus_couchianus
ENSUAMG00000000978	-	100	80.159	ENSXMAG00000010747	sf3b6	100	80.159	Xiphophorus_maculatus