EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000001101 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 258 bases
Position: chrLZNR01014226.1:10386-10643
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000001138	LSM	PF01423.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000001315	-	258	-	ENSUAMP00000001138	85 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000001101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000001101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000001101	-	88	89.333	ENSUAMG00000008176	-	100	87.209
ENSUAMG00000001101	-	73	38.710	ENSUAMG00000014213	LSM6	51	38.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000001101	-	88	89.333	ENSG00000139343	SNRPF	100	87.209	Homo_sapiens
ENSUAMG00000001101	-	87	86.486	ENSAPOG00000003377	snrpf	66	84.706	Acanthochromis_polyacanthus
ENSUAMG00000001101	-	89	94.737	ENSAMEG00000018718	-	100	93.023	Ailuropoda_melanoleuca
ENSUAMG00000001101	-	87	89.189	ENSAMEG00000002166	-	100	87.059	Ailuropoda_melanoleuca
ENSUAMG00000001101	-	86	86.301	ENSACIG00000013216	snrpf	99	84.524	Amphilophus_citrinellus
ENSUAMG00000001101	-	86	86.301	ENSAOCG00000015108	snrpf	99	84.524	Amphiprion_ocellaris
ENSUAMG00000001101	-	86	86.301	ENSAPEG00000022022	snrpf	99	84.524	Amphiprion_percula
ENSUAMG00000001101	-	86	86.301	ENSATEG00000022625	snrpf	90	84.524	Anabas_testudineus
ENSUAMG00000001101	-	87	87.838	ENSACAG00000014073	SNRPF	98	85.882	Anolis_carolinensis
ENSUAMG00000001101	-	88	61.333	ENSANAG00000025860	-	100	61.628	Aotus_nancymaae
ENSUAMG00000001101	-	87	79.730	ENSANAG00000020297	-	78	78.824	Aotus_nancymaae
ENSUAMG00000001101	-	88	89.333	ENSANAG00000032845	SNRPF	100	87.209	Aotus_nancymaae
ENSUAMG00000001101	-	86	86.301	ENSACLG00000016066	snrpf	99	84.524	Astatotilapia_calliptera
ENSUAMG00000001101	-	88	84.000	ENSAMXG00000007421	snrpf	100	82.558	Astyanax_mexicanus
ENSUAMG00000001101	-	92	82.051	ENSBTAG00000050012	-	96	82.051	Bos_taurus
ENSUAMG00000001101	-	88	89.333	ENSBTAG00000016271	SNRPF	100	87.209	Bos_taurus
ENSUAMG00000001101	-	89	64.474	WBGene00004918	snr-5	89	64.474	Caenorhabditis_elegans
ENSUAMG00000001101	-	88	89.333	ENSCJAG00000002705	-	100	87.209	Callithrix_jacchus
ENSUAMG00000001101	-	86	80.822	ENSCAFG00000031151	-	98	80.952	Canis_familiaris
ENSUAMG00000001101	-	88	89.333	ENSCAFG00000006395	-	77	87.209	Canis_familiaris
ENSUAMG00000001101	-	86	80.822	ENSCAFG00020010823	-	98	80.952	Canis_lupus_dingo
ENSUAMG00000001101	-	88	82.667	ENSCAFG00020013161	-	80	82.667	Canis_lupus_dingo
ENSUAMG00000001101	-	92	85.897	ENSTSYG00000031636	-	66	85.897	Carlito_syrichta
ENSUAMG00000001101	-	88	84.211	ENSTSYG00000036502	-	100	82.759	Carlito_syrichta
ENSUAMG00000001101	-	88	76.000	ENSTSYG00000030635	-	100	75.581	Carlito_syrichta
ENSUAMG00000001101	-	87	89.189	ENSCAPG00000007242	SNRPF	100	87.059	Cavia_aperea
ENSUAMG00000001101	-	88	89.333	ENSCPOG00000013898	SNRPF	100	87.209	Cavia_porcellus
ENSUAMG00000001101	-	86	89.041	ENSCCAG00000017356	-	100	86.047	Cebus_capucinus
ENSUAMG00000001101	-	88	89.333	ENSCCAG00000037378	-	100	87.209	Cebus_capucinus
ENSUAMG00000001101	-	100	76.744	ENSCCAG00000033627	-	68	76.744	Cebus_capucinus
ENSUAMG00000001101	-	88	89.333	ENSCLAG00000007200	SNRPF	100	87.209	Chinchilla_lanigera
ENSUAMG00000001101	-	88	89.333	ENSCSAG00000003602	-	70	87.209	Chlorocebus_sabaeus
ENSUAMG00000001101	-	75	89.062	ENSCHOG00000009392	SNRPF	100	89.062	Choloepus_hoffmanni
ENSUAMG00000001101	-	99	83.333	ENSCPBG00000024287	-	67	83.333	Chrysemys_picta_bellii
ENSUAMG00000001101	-	100	77.907	ENSCPBG00000026463	-	100	77.907	Chrysemys_picta_bellii
ENSUAMG00000001101	-	100	77.647	ENSCPBG00000001985	-	100	77.647	Chrysemys_picta_bellii
ENSUAMG00000001101	-	88	81.333	ENSCPBG00000006227	-	100	80.233	Chrysemys_picta_bellii
ENSUAMG00000001101	-	99	75.294	ENSCSAVG00000007498	-	97	75.294	Ciona_savignyi
ENSUAMG00000001101	-	88	89.333	ENSCGRG00001017100	-	100	87.209	Cricetulus_griseus_chok1gshd
ENSUAMG00000001101	-	88	81.333	ENSCGRG00001008965	-	67	80.233	Cricetulus_griseus_chok1gshd
ENSUAMG00000001101	-	94	81.250	ENSCGRG00000018878	-	100	81.250	Cricetulus_griseus_crigri
ENSUAMG00000001101	-	88	89.333	ENSCGRG00000000336	-	100	87.209	Cricetulus_griseus_crigri
ENSUAMG00000001101	-	88	85.333	ENSCSEG00000004748	snrpf	100	83.721	Cynoglossus_semilaevis
ENSUAMG00000001101	-	87	86.486	ENSCVAG00000000397	snrpf	67	84.706	Cyprinodon_variegatus
ENSUAMG00000001101	-	88	84.416	ENSDARG00000105037	snrpf	100	82.955	Danio_rerio
ENSUAMG00000001101	-	88	89.333	ENSDNOG00000043775	-	55	87.209	Dasypus_novemcinctus
ENSUAMG00000001101	-	88	88.000	ENSDNOG00000048989	-	77	86.047	Dasypus_novemcinctus
ENSUAMG00000001101	-	88	78.667	ENSDNOG00000049373	-	70	78.750	Dasypus_novemcinctus
ENSUAMG00000001101	-	85	77.778	ENSDORG00000025351	-	100	77.778	Dipodomys_ordii
ENSUAMG00000001101	-	69	86.441	ENSDORG00000029740	-	85	84.286	Dipodomys_ordii
ENSUAMG00000001101	-	94	72.840	FBgn0000426	SmF	92	72.840	Drosophila_melanogaster
ENSUAMG00000001101	-	88	89.333	ENSETEG00000001558	-	100	87.209	Echinops_telfairi
ENSUAMG00000001101	-	89	72.727	ENSEBUG00000001793	-	83	72.727	Eptatretus_burgeri
ENSUAMG00000001101	-	88	89.333	ENSECAG00000019817	SNRPF	70	87.209	Equus_caballus
ENSUAMG00000001101	-	87	89.189	ENSEEUG00000013509	SNRPF	100	87.059	Erinaceus_europaeus
ENSUAMG00000001101	-	99	80.000	ENSELUG00000007737	RUXF	98	81.176	Esox_lucius
ENSUAMG00000001101	-	88	84.000	ENSELUG00000003121	RUXF	100	82.558	Esox_lucius
ENSUAMG00000001101	-	88	89.333	ENSFCAG00000029966	-	100	87.209	Felis_catus
ENSUAMG00000001101	-	98	67.857	ENSFCAG00000031148	-	77	69.048	Felis_catus
ENSUAMG00000001101	-	88	68.000	ENSFCAG00000021942	-	100	68.605	Felis_catus
ENSUAMG00000001101	-	87	89.189	ENSFALG00000010799	SNRPF	99	87.059	Ficedula_albicollis
ENSUAMG00000001101	-	88	89.333	ENSFDAG00000002831	-	100	87.209	Fukomys_damarensis
ENSUAMG00000001101	-	87	86.486	ENSFHEG00000003240	snrpf	75	84.706	Fundulus_heteroclitus
ENSUAMG00000001101	-	87	86.486	ENSGMOG00000007741	snrpf	100	84.706	Gadus_morhua
ENSUAMG00000001101	-	88	89.333	ENSGALG00000011409	SNRPF	100	87.209	Gallus_gallus
ENSUAMG00000001101	-	86	86.301	ENSGAFG00000016187	snrpf	97	84.524	Gambusia_affinis
ENSUAMG00000001101	-	87	85.135	ENSGACG00000020055	snrpf	100	83.529	Gasterosteus_aculeatus
ENSUAMG00000001101	-	81	76.812	ENSGAGG00000014132	-	100	68.235	Gopherus_agassizii
ENSUAMG00000001101	-	73	85.484	ENSGAGG00000020974	-	52	85.484	Gopherus_agassizii
ENSUAMG00000001101	-	86	83.562	ENSGAGG00000012945	-	77	84.706	Gopherus_agassizii
ENSUAMG00000001101	-	69	83.051	ENSGAGG00000011163	-	100	83.051	Gopherus_agassizii
ENSUAMG00000001101	-	98	77.108	ENSGAGG00000022991	-	95	77.108	Gopherus_agassizii
ENSUAMG00000001101	-	98	72.619	ENSGGOG00000039936	-	95	73.810	Gorilla_gorilla
ENSUAMG00000001101	-	96	67.073	ENSGGOG00000039564	-	100	67.073	Gorilla_gorilla
ENSUAMG00000001101	-	88	89.333	ENSGGOG00000001127	-	100	87.209	Gorilla_gorilla
ENSUAMG00000001101	-	88	89.333	ENSHGLG00000009108	SNRPF	100	87.209	Heterocephalus_glaber_female
ENSUAMG00000001101	-	88	89.333	ENSHGLG00000021172	-	100	87.209	Heterocephalus_glaber_female
ENSUAMG00000001101	-	88	89.333	ENSHGLG00100019596	-	100	87.209	Heterocephalus_glaber_male
ENSUAMG00000001101	-	87	89.189	ENSHGLG00100008103	-	100	87.059	Heterocephalus_glaber_male
ENSUAMG00000001101	-	75	76.056	ENSHCOG00000018663	snrpf	55	76.056	Hippocampus_comes
ENSUAMG00000001101	-	88	86.667	ENSIPUG00000018994	snrpf	100	84.884	Ictalurus_punctatus
ENSUAMG00000001101	-	88	89.333	ENSSTOG00000010434	-	100	87.209	Ictidomys_tridecemlineatus
ENSUAMG00000001101	-	100	71.765	ENSJJAG00000004558	-	100	71.765	Jaculus_jaculus
ENSUAMG00000001101	-	100	75.294	ENSJJAG00000010502	-	100	75.294	Jaculus_jaculus
ENSUAMG00000001101	-	88	89.333	ENSJJAG00000011272	-	100	87.209	Jaculus_jaculus
ENSUAMG00000001101	-	78	84.848	ENSJJAG00000004828	-	100	84.848	Jaculus_jaculus
ENSUAMG00000001101	-	88	85.333	ENSKMAG00000013566	snrpf	100	83.721	Kryptolebias_marmoratus
ENSUAMG00000001101	-	88	86.667	ENSLBEG00000008800	snrpf	100	84.884	Labrus_bergylta
ENSUAMG00000001101	-	88	88.000	ENSLACG00000002456	-	74	86.047	Latimeria_chalumnae
ENSUAMG00000001101	-	88	85.333	ENSLOCG00000015744	snrpf	100	83.721	Lepisosteus_oculatus
ENSUAMG00000001101	-	87	89.189	ENSLAFG00000017426	SNRPF	99	87.059	Loxodonta_africana
ENSUAMG00000001101	-	86	86.301	ENSMAMG00000016593	snrpf	99	84.524	Mastacembelus_armatus
ENSUAMG00000001101	-	86	86.301	ENSMZEG00005014701	snrpf	99	84.524	Maylandia_zebra
ENSUAMG00000001101	-	86	89.041	ENSMGAG00000011453	-	76	86.905	Meleagris_gallopavo
ENSUAMG00000001101	-	74	88.889	ENSMAUG00000016909	-	100	86.486	Mesocricetus_auratus
ENSUAMG00000001101	-	74	88.889	ENSMAUG00000019737	-	100	86.486	Mesocricetus_auratus
ENSUAMG00000001101	-	88	84.000	ENSMAUG00000008799	-	100	82.558	Mesocricetus_auratus
ENSUAMG00000001101	-	71	85.000	ENSMAUG00000010289	-	76	85.000	Mesocricetus_auratus
ENSUAMG00000001101	-	88	89.333	ENSMICG00000012153	-	100	87.209	Microcebus_murinus
ENSUAMG00000001101	-	88	82.667	ENSMICG00000030494	-	69	81.395	Microcebus_murinus
ENSUAMG00000001101	-	88	74.667	ENSMOCG00000022166	-	90	74.390	Microtus_ochrogaster
ENSUAMG00000001101	-	88	89.333	ENSMOCG00000020437	Snrpf	100	87.209	Microtus_ochrogaster
ENSUAMG00000001101	-	80	77.941	ENSMOCG00000020220	-	100	76.923	Microtus_ochrogaster
ENSUAMG00000001101	-	87	85.135	ENSMMOG00000007127	snrpf	100	83.529	Mola_mola
ENSUAMG00000001101	-	88	89.333	ENSMODG00000008091	SNRPF	75	87.209	Monodelphis_domestica
ENSUAMG00000001101	-	86	86.301	ENSMALG00000012328	snrpf	99	84.524	Monopterus_albus
ENSUAMG00000001101	-	88	89.333	MGP_CAROLIEiJ_G0015735	-	100	87.209	Mus_caroli
ENSUAMG00000001101	-	88	89.333	ENSMUSG00000020018	Snrpf	100	87.209	Mus_musculus
ENSUAMG00000001101	-	88	89.333	MGP_PahariEiJ_G0031350	Snrpf	100	87.209	Mus_pahari
ENSUAMG00000001101	-	88	89.333	MGP_SPRETEiJ_G0016553	Snrpf	100	87.209	Mus_spretus
ENSUAMG00000001101	-	88	89.333	ENSMPUG00000007176	-	77	87.209	Mustela_putorius_furo
ENSUAMG00000001101	-	88	89.333	ENSMLUG00000026149	-	81	87.209	Myotis_lucifugus
ENSUAMG00000001101	-	88	89.333	ENSMLUG00000029201	-	81	87.209	Myotis_lucifugus
ENSUAMG00000001101	-	88	89.333	ENSMLUG00000027932	-	81	87.209	Myotis_lucifugus
ENSUAMG00000001101	-	87	89.189	ENSMLUG00000013577	-	100	87.059	Myotis_lucifugus
ENSUAMG00000001101	-	100	70.930	ENSMLUG00000026269	-	81	72.093	Myotis_lucifugus
ENSUAMG00000001101	-	74	77.778	ENSNGAG00000005851	-	74	77.778	Nannospalax_galili
ENSUAMG00000001101	-	88	89.333	ENSNGAG00000024292	-	100	87.209	Nannospalax_galili
ENSUAMG00000001101	-	87	86.486	ENSNBRG00000011682	snrpf	87	84.706	Neolamprologus_brichardi
ENSUAMG00000001101	-	87	63.514	ENSMEUG00000000671	SNRPF	100	64.706	Notamacropus_eugenii
ENSUAMG00000001101	-	88	89.333	ENSODEG00000010328	-	100	87.209	Octodon_degus
ENSUAMG00000001101	-	88	88.000	ENSOCUG00000010925	SNRPF	76	86.047	Oryctolagus_cuniculus
ENSUAMG00000001101	-	87	83.784	ENSORLG00020008216	snrpf	100	82.353	Oryzias_latipes_hni
ENSUAMG00000001101	-	87	83.784	ENSORLG00015007418	snrpf	100	82.353	Oryzias_latipes_hsok
ENSUAMG00000001101	-	86	84.932	ENSOMEG00000003018	snrpf	99	83.333	Oryzias_melastigma
ENSUAMG00000001101	-	88	88.000	ENSOGAG00000030323	-	100	84.884	Otolemur_garnettii
ENSUAMG00000001101	-	88	89.333	ENSOARG00000011853	-	75	87.209	Ovis_aries
ENSUAMG00000001101	-	96	65.854	ENSPPAG00000037479	-	100	65.854	Pan_paniscus
ENSUAMG00000001101	-	98	72.619	ENSPPAG00000037544	-	95	73.810	Pan_paniscus
ENSUAMG00000001101	-	88	89.333	ENSPPRG00000005875	-	100	87.209	Panthera_pardus
ENSUAMG00000001101	-	94	71.250	ENSPPRG00000007449	-	82	71.250	Panthera_pardus
ENSUAMG00000001101	-	88	89.333	ENSPTIG00000007520	SNRPF	100	87.209	Panthera_tigris_altaica
ENSUAMG00000001101	-	98	69.048	ENSPTIG00000005117	-	100	70.238	Panthera_tigris_altaica
ENSUAMG00000001101	-	98	72.619	ENSPTRG00000043814	-	95	73.810	Pan_troglodytes
ENSUAMG00000001101	-	96	65.854	ENSPTRG00000047717	-	100	65.854	Pan_troglodytes
ENSUAMG00000001101	-	87	86.486	ENSPKIG00000014784	snrpf	93	84.706	Paramormyrops_kingsleyae
ENSUAMG00000001101	-	87	89.189	ENSPSIG00000016462	SNRPF	99	87.059	Pelodiscus_sinensis
ENSUAMG00000001101	-	87	85.135	ENSPMGG00000023548	snrpf	100	83.529	Periophthalmus_magnuspinnatus
ENSUAMG00000001101	-	88	89.333	ENSPEMG00000023326	Snrpf	100	87.209	Peromyscus_maniculatus_bairdii
ENSUAMG00000001101	-	86	86.301	ENSPLAG00000023932	snrpf	99	84.524	Poecilia_latipinna
ENSUAMG00000001101	-	86	86.301	ENSPMEG00000003377	snrpf	99	84.524	Poecilia_mexicana
ENSUAMG00000001101	-	88	86.842	ENSPREG00000022635	snrpf	100	85.057	Poecilia_reticulata
ENSUAMG00000001101	-	88	89.333	ENSPPYG00000004847	-	100	87.209	Pongo_abelii
ENSUAMG00000001101	-	88	89.333	ENSPCOG00000023833	-	100	87.209	Propithecus_coquereli
ENSUAMG00000001101	-	88	89.333	ENSPVAG00000009036	SNRPF	100	87.209	Pteropus_vampyrus
ENSUAMG00000001101	-	86	86.301	ENSPNYG00000021712	snrpf	99	84.524	Pundamilia_nyererei
ENSUAMG00000001101	-	86	84.932	ENSPNAG00000019117	snrpf	99	83.333	Pygocentrus_nattereri
ENSUAMG00000001101	-	88	89.333	ENSRNOG00000005556	Snrpf	100	87.209	Rattus_norvegicus
ENSUAMG00000001101	-	88	86.667	ENSRBIG00000030414	-	100	83.721	Rhinopithecus_bieti
ENSUAMG00000001101	-	88	86.667	ENSRROG00000021975	-	95	85.366	Rhinopithecus_roxellana
ENSUAMG00000001101	-	81	51.429	YPR182W	SMX3	81	51.429	Saccharomyces_cerevisiae
ENSUAMG00000001101	-	88	89.333	ENSSBOG00000036179	-	100	87.209	Saimiri_boliviensis_boliviensis
ENSUAMG00000001101	-	88	74.667	ENSSBOG00000032297	-	100	73.256	Saimiri_boliviensis_boliviensis
ENSUAMG00000001101	-	88	89.333	ENSSBOG00000012868	-	100	86.047	Saimiri_boliviensis_boliviensis
ENSUAMG00000001101	-	84	73.239	ENSSBOG00000027638	-	100	71.910	Saimiri_boliviensis_boliviensis
ENSUAMG00000001101	-	87	89.189	ENSSHAG00000012294	SNRPF	77	87.059	Sarcophilus_harrisii
ENSUAMG00000001101	-	75	85.938	ENSSFOG00015021523	snrpf	96	85.938	Scleropages_formosus
ENSUAMG00000001101	-	88	84.000	ENSSMAG00000005533	snrpf	99	82.558	Scophthalmus_maximus
ENSUAMG00000001101	-	78	86.364	ENSSDUG00000016283	snrpf	79	86.364	Seriola_dumerili
ENSUAMG00000001101	-	88	85.333	ENSSLDG00000005119	snrpf	100	83.721	Seriola_lalandi_dorsalis
ENSUAMG00000001101	-	93	68.354	ENSSLDG00000003885	-	96	68.354	Seriola_lalandi_dorsalis
ENSUAMG00000001101	-	86	89.041	ENSSPUG00000014590	-	99	86.905	Sphenodon_punctatus
ENSUAMG00000001101	-	87	86.486	ENSSPAG00000003283	snrpf	97	84.706	Stegastes_partitus
ENSUAMG00000001101	-	88	89.333	ENSSSCG00000000895	SNRPF	100	87.209	Sus_scrofa
ENSUAMG00000001101	-	68	84.483	ENSTRUG00000014956	snrpf	100	82.609	Takifugu_rubripes
ENSUAMG00000001101	-	88	86.667	ENSTNIG00000012672	snrpf	100	84.884	Tetraodon_nigroviridis
ENSUAMG00000001101	-	88	64.000	ENSTTRG00000006070	SNRPF	100	65.116	Tursiops_truncatus
ENSUAMG00000001101	-	100	98.824	ENSUMAG00000006177	-	100	98.824	Ursus_maritimus
ENSUAMG00000001101	-	88	89.333	ENSUMAG00000003528	-	100	87.209	Ursus_maritimus
ENSUAMG00000001101	-	88	89.333	ENSVPAG00000008712	-	100	87.209	Vicugna_pacos
ENSUAMG00000001101	-	92	80.769	ENSVVUG00000023821	-	100	80.769	Vulpes_vulpes
ENSUAMG00000001101	-	87	65.789	ENSXETG00000021630	snrpf	100	66.667	Xenopus_tropicalis
ENSUAMG00000001101	-	88	85.526	ENSXCOG00000013860	snrpf	100	83.908	Xiphophorus_couchianus
ENSUAMG00000001101	-	86	86.301	ENSXMAG00000015448	snrpf	99	84.524	Xiphophorus_maculatus