EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000001127 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 13965 bases
Position: chrLZNR01014227.1:506-14470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000001487	eIF-3c_N	PF05470.12	1.3e-205	1	1
ENSUAMP00000001499	eIF-3c_N	PF05470.12	7.1e-181	1	2
ENSUAMP00000001499	eIF-3c_N	PF05470.12	7.1e-181	2	2
ENSUAMP00000001523	eIF-3c_N	PF05470.12	7.5e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000001753	-	1035	-	ENSUAMP00000001523	344 (aa)	-	-
ENSUAMT00000001714	-	2196	-	ENSUAMP00000001487	731 (aa)	-	-
ENSUAMT00000001728	-	2010	-	ENSUAMP00000001499	669 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000001127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000001127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000001127	-	91	100.000	ENSG00000205609	EIF3CL	72	98.628	Homo_sapiens
ENSUAMG00000001127	-	91	100.000	ENSG00000184110	EIF3C	73	98.779	Homo_sapiens
ENSUAMG00000001127	-	91	92.038	ENSAPOG00000024092	eif3c	73	84.339	Acanthochromis_polyacanthus
ENSUAMG00000001127	-	91	100.000	ENSAMEG00000015454	-	72	99.847	Ailuropoda_melanoleuca
ENSUAMG00000001127	-	91	92.675	ENSACIG00000015082	eif3c	69	84.219	Amphilophus_citrinellus
ENSUAMG00000001127	-	91	92.357	ENSAOCG00000021466	eif3c	69	84.158	Amphiprion_ocellaris
ENSUAMG00000001127	-	91	92.357	ENSAPEG00000010521	eif3c	70	84.158	Amphiprion_percula
ENSUAMG00000001127	-	91	92.357	ENSATEG00000019001	eif3c	66	84.615	Anabas_testudineus
ENSUAMG00000001127	-	91	94.586	ENSACAG00000005937	-	71	88.804	Anolis_carolinensis
ENSUAMG00000001127	-	91	100.000	ENSANAG00000020640	-	72	98.779	Aotus_nancymaae
ENSUAMG00000001127	-	91	92.357	ENSACLG00000009347	eif3c	70	84.193	Astatotilapia_calliptera
ENSUAMG00000001127	-	91	91.401	ENSACLG00000009322	eif3c	72	81.311	Astatotilapia_calliptera
ENSUAMG00000001127	-	91	92.675	ENSAMXG00000020949	eif3c	66	83.824	Astyanax_mexicanus
ENSUAMG00000001127	-	83	79.791	ENSBTAG00000054577	-	86	79.791	Bos_taurus
ENSUAMG00000001127	-	91	100.000	ENSBTAG00000006543	EIF3CL	72	99.084	Bos_taurus
ENSUAMG00000001127	-	98	54.839	WBGene00001226	eif-3.C	66	46.916	Caenorhabditis_elegans
ENSUAMG00000001127	-	91	100.000	ENSCJAG00000006341	-	100	88.798	Callithrix_jacchus
ENSUAMG00000001127	-	91	100.000	ENSCAFG00000017143	-	72	99.695	Canis_familiaris
ENSUAMG00000001127	-	91	100.000	ENSCAFG00020017587	-	72	99.695	Canis_lupus_dingo
ENSUAMG00000001127	-	91	100.000	ENSCHIG00000024795	-	72	99.389	Capra_hircus
ENSUAMG00000001127	-	91	99.363	ENSTSYG00000003486	-	72	98.473	Carlito_syrichta
ENSUAMG00000001127	-	96	84.219	ENSCAPG00000015887	-	75	88.923	Cavia_aperea
ENSUAMG00000001127	-	91	99.682	ENSCPOG00000007533	-	72	98.779	Cavia_porcellus
ENSUAMG00000001127	-	91	100.000	ENSCCAG00000034928	-	74	98.931	Cebus_capucinus
ENSUAMG00000001127	-	95	82.154	ENSCCAG00000029099	-	73	84.356	Cebus_capucinus
ENSUAMG00000001127	-	96	87.939	ENSCCAG00000027724	-	71	92.672	Cebus_capucinus
ENSUAMG00000001127	-	91	100.000	ENSCATG00000032673	-	72	98.626	Cercocebus_atys
ENSUAMG00000001127	-	91	100.000	ENSCLAG00000011094	-	72	98.626	Chinchilla_lanigera
ENSUAMG00000001127	-	91	100.000	ENSCSAG00000006297	-	72	98.626	Chlorocebus_sabaeus
ENSUAMG00000001127	-	72	100.000	ENSCHOG00000003120	-	88	83.012	Choloepus_hoffmanni
ENSUAMG00000001127	-	74	95.312	ENSCPBG00000012407	-	72	79.079	Chrysemys_picta_bellii
ENSUAMG00000001127	-	97	68.155	ENSCSAVG00000006744	-	75	56.842	Ciona_savignyi
ENSUAMG00000001127	-	91	100.000	ENSCANG00000033626	-	72	98.626	Colobus_angolensis_palliatus
ENSUAMG00000001127	-	91	100.000	ENSCGRG00001015265	EIF3C	72	98.626	Cricetulus_griseus_chok1gshd
ENSUAMG00000001127	-	91	90.764	ENSCSEG00000017770	eif3c	67	82.843	Cynoglossus_semilaevis
ENSUAMG00000001127	-	91	92.357	ENSCVAG00000005402	eif3c	72	81.981	Cyprinodon_variegatus
ENSUAMG00000001127	-	91	92.994	ENSDARG00000016443	eif3c	66	84.452	Danio_rerio
ENSUAMG00000001127	-	91	100.000	ENSDNOG00000031497	-	72	99.695	Dasypus_novemcinctus
ENSUAMG00000001127	-	91	100.000	ENSDORG00000016471	Eif3c	74	98.779	Dipodomys_ordii
ENSUAMG00000001127	-	91	69.427	FBgn0034258	eIF3c	63	57.288	Drosophila_melanogaster
ENSUAMG00000001127	-	84	98.624	ENSETEG00000013527	-	65	98.624	Echinops_telfairi
ENSUAMG00000001127	-	97	80.896	ENSEBUG00000001629	eif3c	69	71.292	Eptatretus_burgeri
ENSUAMG00000001127	-	93	97.531	ENSEASG00005014845	-	94	99.683	Equus_asinus_asinus
ENSUAMG00000001127	-	91	100.000	ENSECAG00000008746	-	72	99.542	Equus_caballus
ENSUAMG00000001127	-	83	99.649	ENSEEUG00000006148	-	72	97.387	Erinaceus_europaeus
ENSUAMG00000001127	-	90	62.783	ENSEEUG00000000726	-	64	64.456	Erinaceus_europaeus
ENSUAMG00000001127	-	91	92.675	ENSELUG00000022257	eif3c	73	83.914	Esox_lucius
ENSUAMG00000001127	-	91	100.000	ENSFCAG00000015782	-	72	99.542	Felis_catus
ENSUAMG00000001127	-	91	100.000	ENSFDAG00000003588	-	74	98.931	Fukomys_damarensis
ENSUAMG00000001127	-	91	92.038	ENSFHEG00000014154	EIF3C	69	84.150	Fundulus_heteroclitus
ENSUAMG00000001127	-	91	91.720	ENSGMOG00000016885	eif3c	66	84.391	Gadus_morhua
ENSUAMG00000001127	-	57	88.945	ENSGAFG00000019324	-	79	91.371	Gambusia_affinis
ENSUAMG00000001127	-	91	92.038	ENSGACG00000007652	eif3c	67	83.797	Gasterosteus_aculeatus
ENSUAMG00000001127	-	91	92.994	ENSGAGG00000006666	-	77	87.097	Gopherus_agassizii
ENSUAMG00000001127	-	91	100.000	ENSGGOG00000026919	EIF3C	75	98.626	Gorilla_gorilla
ENSUAMG00000001127	-	92	89.623	ENSHBUG00000008471	eif3c	98	88.615	Haplochromis_burtoni
ENSUAMG00000001127	-	85	71.575	ENSHGLG00000014986	-	100	71.575	Heterocephalus_glaber_female
ENSUAMG00000001127	-	91	100.000	ENSHGLG00000011445	EIF3C	72	99.237	Heterocephalus_glaber_female
ENSUAMG00000001127	-	91	100.000	ENSHGLG00100000217	EIF3C	72	99.237	Heterocephalus_glaber_male
ENSUAMG00000001127	-	85	71.575	ENSHGLG00100004115	-	100	71.575	Heterocephalus_glaber_male
ENSUAMG00000001127	-	91	92.038	ENSHCOG00000019694	eif3c	66	82.815	Hippocampus_comes
ENSUAMG00000001127	-	91	92.357	ENSIPUG00000016878	eif3c	71	84.666	Ictalurus_punctatus
ENSUAMG00000001127	-	91	100.000	ENSSTOG00000021278	-	72	99.237	Ictidomys_tridecemlineatus
ENSUAMG00000001127	-	91	100.000	ENSJJAG00000012722	Eif3c	72	97.710	Jaculus_jaculus
ENSUAMG00000001127	-	91	92.038	ENSKMAG00000021662	eif3c	65	83.633	Kryptolebias_marmoratus
ENSUAMG00000001127	-	92	91.746	ENSLBEG00000008977	-	93	92.012	Labrus_bergylta
ENSUAMG00000001127	-	91	91.720	ENSLBEG00000023370	eif3c	68	84.655	Labrus_bergylta
ENSUAMG00000001127	-	91	90.764	ENSLACG00000000770	eif3c	72	83.156	Latimeria_chalumnae
ENSUAMG00000001127	-	91	100.000	ENSLAFG00000027426	-	73	98.051	Loxodonta_africana
ENSUAMG00000001127	-	91	100.000	ENSMFAG00000041930	-	72	98.626	Macaca_fascicularis
ENSUAMG00000001127	-	91	100.000	ENSMMUG00000011798	-	72	98.626	Macaca_mulatta
ENSUAMG00000001127	-	91	100.000	ENSMNEG00000023915	-	72	98.626	Macaca_nemestrina
ENSUAMG00000001127	-	91	100.000	ENSMLEG00000027529	-	72	98.626	Mandrillus_leucophaeus
ENSUAMG00000001127	-	91	92.357	ENSMAMG00000012512	eif3c	73	84.245	Mastacembelus_armatus
ENSUAMG00000001127	-	91	92.357	ENSMZEG00005013699	eif3c	70	84.193	Maylandia_zebra
ENSUAMG00000001127	-	91	91.720	ENSMZEG00005013685	eif3c	72	81.475	Maylandia_zebra
ENSUAMG00000001127	-	91	100.000	ENSMAUG00000010621	Eif3c	72	98.626	Mesocricetus_auratus
ENSUAMG00000001127	-	91	100.000	ENSMICG00000036748	-	72	99.695	Microcebus_murinus
ENSUAMG00000001127	-	91	100.000	ENSMOCG00000004204	Eif3c	72	98.168	Microtus_ochrogaster
ENSUAMG00000001127	-	91	92.038	ENSMMOG00000001572	eif3c	72	82.838	Mola_mola
ENSUAMG00000001127	-	86	91.186	ENSMODG00000013781	-	100	91.379	Monodelphis_domestica
ENSUAMG00000001127	-	91	99.045	ENSMODG00000015579	-	71	97.381	Monodelphis_domestica
ENSUAMG00000001127	-	91	91.720	ENSMALG00000008907	eif3c	73	84.437	Monopterus_albus
ENSUAMG00000001127	-	91	100.000	MGP_CAROLIEiJ_G0030451	Eif3c	72	98.015	Mus_caroli
ENSUAMG00000001127	-	91	100.000	ENSMUSG00000030738	Eif3c	72	98.015	Mus_musculus
ENSUAMG00000001127	-	91	98.726	MGP_PahariEiJ_G0013661	Eif3c	72	97.252	Mus_pahari
ENSUAMG00000001127	-	91	100.000	MGP_SPRETEiJ_G0031565	Eif3c	72	98.015	Mus_spretus
ENSUAMG00000001127	-	91	99.682	ENSMPUG00000012732	-	74	99.084	Mustela_putorius_furo
ENSUAMG00000001127	-	91	100.000	ENSMLUG00000015558	-	72	98.473	Myotis_lucifugus
ENSUAMG00000001127	-	91	100.000	ENSNGAG00000007177	-	72	98.779	Nannospalax_galili
ENSUAMG00000001127	-	96	71.495	ENSNGAG00000010901	-	81	74.962	Nannospalax_galili
ENSUAMG00000001127	-	91	89.329	ENSNLEG00000001425	-	75	83.259	Nomascus_leucogenys
ENSUAMG00000001127	-	90	61.093	ENSMEUG00000005317	-	78	58.000	Notamacropus_eugenii
ENSUAMG00000001127	-	92	81.905	ENSMEUG00000009939	-	72	78.955	Notamacropus_eugenii
ENSUAMG00000001127	-	91	99.682	ENSOPRG00000000931	-	72	99.237	Ochotona_princeps
ENSUAMG00000001127	-	91	100.000	ENSODEG00000013508	-	72	98.626	Octodon_degus
ENSUAMG00000001127	-	87	60.231	ENSONIG00000011434	eif3c	99	63.531	Oreochromis_niloticus
ENSUAMG00000001127	-	96	92.035	ENSOANG00000011410	-	72	91.791	Ornithorhynchus_anatinus
ENSUAMG00000001127	-	91	100.000	ENSOCUG00000022489	-	72	99.695	Oryctolagus_cuniculus
ENSUAMG00000001127	-	91	91.083	ENSORLG00000006318	eif3c	68	84.734	Oryzias_latipes
ENSUAMG00000001127	-	91	91.083	ENSORLG00020015713	eif3c	69	83.220	Oryzias_latipes_hni
ENSUAMG00000001127	-	91	91.083	ENSORLG00015013772	eif3c	65	83.444	Oryzias_latipes_hsok
ENSUAMG00000001127	-	91	91.720	ENSOMEG00000020450	eif3c	68	82.109	Oryzias_melastigma
ENSUAMG00000001127	-	91	100.000	ENSOGAG00000012737	-	72	99.084	Otolemur_garnettii
ENSUAMG00000001127	-	91	100.000	ENSOARG00000002892	-	72	99.389	Ovis_aries
ENSUAMG00000001127	-	91	100.000	ENSPPRG00000012336	-	72	99.542	Panthera_pardus
ENSUAMG00000001127	-	91	100.000	ENSPTIG00000011712	-	72	99.542	Panthera_tigris_altaica
ENSUAMG00000001127	-	95	82.622	ENSPTRG00000007935	-	96	82.622	Pan_troglodytes
ENSUAMG00000001127	-	91	100.000	ENSPANG00000021151	-	72	98.626	Papio_anubis
ENSUAMG00000001127	-	91	92.675	ENSPKIG00000002049	eif3c	66	84.262	Paramormyrops_kingsleyae
ENSUAMG00000001127	-	91	92.357	ENSPMGG00000005409	eif3c	70	85.075	Periophthalmus_magnuspinnatus
ENSUAMG00000001127	-	91	100.000	ENSPEMG00000010899	Eif3c	72	98.473	Peromyscus_maniculatus_bairdii
ENSUAMG00000001127	-	91	99.045	ENSPCIG00000025206	-	71	96.918	Phascolarctos_cinereus
ENSUAMG00000001127	-	91	92.357	ENSPFOG00000004476	eif3c	66	83.934	Poecilia_formosa
ENSUAMG00000001127	-	91	92.357	ENSPLAG00000017480	eif3c	71	83.934	Poecilia_latipinna
ENSUAMG00000001127	-	91	92.357	ENSPMEG00000019512	eif3c	71	84.219	Poecilia_mexicana
ENSUAMG00000001127	-	91	92.357	ENSPREG00000023139	eif3c	70	83.914	Poecilia_reticulata
ENSUAMG00000001127	-	91	100.000	ENSPPYG00000007227	-	72	94.351	Pongo_abelii
ENSUAMG00000001127	-	91	99.363	ENSPCAG00000012710	-	100	99.168	Procavia_capensis
ENSUAMG00000001127	-	91	100.000	ENSPCOG00000019289	-	77	96.210	Propithecus_coquereli
ENSUAMG00000001127	-	91	100.000	ENSPVAG00000005804	-	72	98.779	Pteropus_vampyrus
ENSUAMG00000001127	-	78	91.822	ENSPNYG00000004636	-	96	91.822	Pundamilia_nyererei
ENSUAMG00000001127	-	91	92.357	ENSPNAG00000024040	eif3c	70	85.592	Pygocentrus_nattereri
ENSUAMG00000001127	-	91	100.000	ENSRNOG00000018761	Eif3c	72	98.015	Rattus_norvegicus
ENSUAMG00000001127	-	91	100.000	ENSRBIG00000044009	-	70	97.802	Rhinopithecus_bieti
ENSUAMG00000001127	-	91	100.000	ENSRROG00000043626	-	72	98.626	Rhinopithecus_roxellana
ENSUAMG00000001127	-	93	33.025	YMR309C	-	65	31.148	Saccharomyces_cerevisiae
ENSUAMG00000001127	-	91	100.000	ENSSBOG00000032155	-	72	98.779	Saimiri_boliviensis_boliviensis
ENSUAMG00000001127	-	91	98.418	ENSSHAG00000011808	-	74	96.928	Sarcophilus_harrisii
ENSUAMG00000001127	-	91	92.038	ENSSFOG00015021823	eif3c	66	84.565	Scleropages_formosus
ENSUAMG00000001127	-	91	91.720	ENSSMAG00000016638	eif3c	64	85.249	Scophthalmus_maximus
ENSUAMG00000001127	-	91	92.357	ENSSDUG00000023117	eif3c	70	84.150	Seriola_dumerili
ENSUAMG00000001127	-	91	92.357	ENSSLDG00000009706	eif3c	73	83.660	Seriola_lalandi_dorsalis
ENSUAMG00000001127	-	91	95.223	ENSSPUG00000016470	-	74	87.270	Sphenodon_punctatus
ENSUAMG00000001127	-	91	92.357	ENSSPAG00000000426	eif3c	67	83.987	Stegastes_partitus
ENSUAMG00000001127	-	91	99.682	ENSSSCG00000034927	-	72	99.084	Sus_scrofa
ENSUAMG00000001127	-	91	91.401	ENSTRUG00000008951	eif3c	67	82.080	Takifugu_rubripes
ENSUAMG00000001127	-	91	90.446	ENSTNIG00000015210	eif3c	67	84.046	Tetraodon_nigroviridis
ENSUAMG00000001127	-	91	99.682	ENSTTRG00000005880	-	72	98.931	Tursiops_truncatus
ENSUAMG00000001127	-	91	100.000	ENSUMAG00000010927	-	72	99.847	Ursus_maritimus
ENSUAMG00000001127	-	96	92.672	ENSVVUG00000025970	-	71	97.557	Vulpes_vulpes
ENSUAMG00000001127	-	91	89.809	ENSXETG00000002941	eif3c	72	80.689	Xenopus_tropicalis
ENSUAMG00000001127	-	91	91.720	ENSXMAG00000013796	eif3c	67	83.824	Xiphophorus_maculatus