EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000001919 (Gene tree)
Gene ID: -
Gene Symbol: AFF1
Alias: AF-4|AF4|MLLT2|PBM1
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 186107 bases
Position: chrLZNR01001674.1:61072-247178
Accession: 7135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000002077	AF-4	PF05110.13	0	1	1
ENSUAMP00000002068	AF-4	PF05110.13	0	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000002373	AFF1-202	4579	-	ENSUAMP00000002077	1009 (aa)	-	-
ENSUAMT00000002364	AFF1-201	4359	-	ENSUAMP00000002068	1016 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000001919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000001919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000001919	AFF1	99	80.378	ENSG00000172493	AFF1	100	86.715	Homo_sapiens
ENSUAMG00000001919	AFF1	99	96.693	ENSAMEG00000003337	AFF1	82	96.693	Ailuropoda_melanoleuca
ENSUAMG00000001919	AFF1	72	35.867	ENSAOCG00000008476	aff4	59	36.892	Amphiprion_ocellaris
ENSUAMG00000001919	AFF1	72	35.867	ENSAPEG00000018275	aff4	59	36.892	Amphiprion_percula
ENSUAMG00000001919	AFF1	99	51.779	ENSAPLG00000004059	AFF1	81	51.087	Anas_platyrhynchos
ENSUAMG00000001919	AFF1	99	48.638	ENSACAG00000012192	AFF1	80	47.801	Anolis_carolinensis
ENSUAMG00000001919	AFF1	99	79.345	ENSANAG00000017095	AFF1	81	80.437	Aotus_nancymaae
ENSUAMG00000001919	AFF1	58	37.785	ENSAMXG00000020137	aff4	57	32.846	Astyanax_mexicanus
ENSUAMG00000001919	AFF1	99	79.961	ENSBTAG00000018488	AFF1	81	80.157	Bos_taurus
ENSUAMG00000001919	AFF1	99	79.146	ENSCJAG00000006047	AFF1	81	79.245	Callithrix_jacchus
ENSUAMG00000001919	AFF1	99	89.731	ENSCAFG00000009476	AFF1	82	90.030	Canis_familiaris
ENSUAMG00000001919	AFF1	99	79.901	ENSCHIG00000008450	AFF1	81	80.396	Capra_hircus
ENSUAMG00000001919	AFF1	81	74.848	ENSTSYG00000002039	AFF1	100	74.241	Carlito_syrichta
ENSUAMG00000001919	AFF1	99	62.550	ENSCPOG00000034568	AFF1	81	64.044	Cavia_porcellus
ENSUAMG00000001919	AFF1	57	54.054	ENSCPOG00000006346	AFF3	74	54.667	Cavia_porcellus
ENSUAMG00000001919	AFF1	99	75.673	ENSCCAG00000027623	AFF1	99	83.704	Cebus_capucinus
ENSUAMG00000001919	AFF1	99	80.735	ENSCATG00000039501	AFF1	81	81.033	Cercocebus_atys
ENSUAMG00000001919	AFF1	99	64.554	ENSCLAG00000005537	AFF1	82	64.349	Chinchilla_lanigera
ENSUAMG00000001919	AFF1	57	56.757	ENSCLAG00000017100	AFF3	74	57.333	Chinchilla_lanigera
ENSUAMG00000001919	AFF1	99	80.437	ENSCSAG00000004333	AFF1	81	80.636	Chlorocebus_sabaeus
ENSUAMG00000001919	AFF1	74	82.126	ENSCHOG00000000041	AFF1	61	82.090	Choloepus_hoffmanni
ENSUAMG00000001919	AFF1	99	55.512	ENSCPBG00000005382	AFF1	81	54.867	Chrysemys_picta_bellii
ENSUAMG00000001919	AFF1	72	33.705	ENSCPBG00000020831	AFF2	60	34.689	Chrysemys_picta_bellii
ENSUAMG00000001919	AFF1	99	80.178	ENSCANG00000037514	AFF1	81	80.476	Colobus_angolensis_palliatus
ENSUAMG00000001919	AFF1	99	67.544	ENSCGRG00001015769	Aff1	82	66.894	Cricetulus_griseus_chok1gshd
ENSUAMG00000001919	AFF1	50	45.455	ENSCGRG00000003408	Aff3	74	54.667	Cricetulus_griseus_crigri
ENSUAMG00000001919	AFF1	65	62.891	ENSCGRG00000004837	Aff1	73	61.642	Cricetulus_griseus_crigri
ENSUAMG00000001919	AFF1	74	36.903	ENSCSEG00000017002	aff4	80	34.226	Cynoglossus_semilaevis
ENSUAMG00000001919	AFF1	64	77.419	ENSDNOG00000048783	-	74	78.034	Dasypus_novemcinctus
ENSUAMG00000001919	AFF1	57	55.405	ENSDORG00000007294	Aff3	74	56.000	Dipodomys_ordii
ENSUAMG00000001919	AFF1	98	71.156	ENSDORG00000013881	Aff1	81	70.955	Dipodomys_ordii
ENSUAMG00000001919	AFF1	99	72.619	ENSETEG00000014905	AFF1	81	73.214	Echinops_telfairi
ENSUAMG00000001919	AFF1	99	81.746	ENSEASG00005012760	AFF1	81	81.845	Equus_asinus_asinus
ENSUAMG00000001919	AFF1	99	81.151	ENSECAG00000003619	AFF1	88	80.788	Equus_caballus
ENSUAMG00000001919	AFF1	63	95.000	ENSEEUG00000013664	-	51	95.000	Erinaceus_europaeus
ENSUAMG00000001919	AFF1	99	85.079	ENSFCAG00000029806	AFF1	82	85.277	Felis_catus
ENSUAMG00000001919	AFF1	99	44.780	ENSFALG00000005554	AFF1	80	43.888	Ficedula_albicollis
ENSUAMG00000001919	AFF1	99	64.136	ENSFDAG00000018846	AFF1	81	64.075	Fukomys_damarensis
ENSUAMG00000001919	AFF1	89	57.143	ENSGALG00000043935	AFF1	76	57.143	Gallus_gallus
ENSUAMG00000001919	AFF1	78	59.701	ENSGACG00000020734	aff4	60	38.977	Gasterosteus_aculeatus
ENSUAMG00000001919	AFF1	99	80.199	ENSGGOG00000008497	AFF1	81	80.299	Gorilla_gorilla
ENSUAMG00000001919	AFF1	99	63.972	ENSHGLG00000001384	AFF1	81	65.269	Heterocephalus_glaber_female
ENSUAMG00000001919	AFF1	99	80.100	ENSSTOG00000006530	AFF1	81	80.400	Ictidomys_tridecemlineatus
ENSUAMG00000001919	AFF1	99	68.979	ENSJJAG00000022877	Aff1	80	69.772	Jaculus_jaculus
ENSUAMG00000001919	AFF1	72	35.629	ENSLBEG00000017778	aff4	59	35.223	Labrus_bergylta
ENSUAMG00000001919	AFF1	99	46.784	ENSLACG00000007303	AFF1	99	45.684	Latimeria_chalumnae
ENSUAMG00000001919	AFF1	99	80.933	ENSMFAG00000037700	AFF1	81	81.231	Macaca_fascicularis
ENSUAMG00000001919	AFF1	99	80.735	ENSMMUG00000014076	AFF1	100	80.617	Macaca_mulatta
ENSUAMG00000001919	AFF1	99	80.834	ENSMNEG00000031536	AFF1	81	81.132	Macaca_nemestrina
ENSUAMG00000001919	AFF1	99	80.735	ENSMLEG00000039099	AFF1	82	80.938	Mandrillus_leucophaeus
ENSUAMG00000001919	AFF1	99	45.248	ENSMGAG00000007646	AFF1	81	44.608	Meleagris_gallopavo
ENSUAMG00000001919	AFF1	72	47.887	ENSMAUG00000013669	Aff4	55	47.887	Mesocricetus_auratus
ENSUAMG00000001919	AFF1	99	65.585	ENSMAUG00000010241	Aff1	81	64.217	Mesocricetus_auratus
ENSUAMG00000001919	AFF1	99	54.410	ENSMODG00000020745	AFF1	79	54.014	Monodelphis_domestica
ENSUAMG00000001919	AFF1	72	37.003	ENSMALG00000017690	aff4	59	35.247	Monopterus_albus
ENSUAMG00000001919	AFF1	71	38.356	MGP_CAROLIEiJ_G0016331	Aff4	57	59.420	Mus_caroli
ENSUAMG00000001919	AFF1	99	62.877	MGP_CAROLIEiJ_G0027469	Aff1	96	63.531	Mus_caroli
ENSUAMG00000001919	AFF1	99	64.334	ENSMUSG00000029313	Aff1	96	63.931	Mus_musculus
ENSUAMG00000001919	AFF1	56	40.806	ENSMUSG00000049470	Aff4	57	59.420	Mus_musculus
ENSUAMG00000001919	AFF1	99	64.300	MGP_PahariEiJ_G0017247	Aff1	96	64.079	Mus_pahari
ENSUAMG00000001919	AFF1	56	40.630	MGP_PahariEiJ_G0017466	Aff4	57	59.420	Mus_pahari
ENSUAMG00000001919	AFF1	99	65.073	MGP_SPRETEiJ_G0028466	Aff1	96	64.352	Mus_spretus
ENSUAMG00000001919	AFF1	56	40.806	MGP_SPRETEiJ_G0017175	Aff4	57	59.420	Mus_spretus
ENSUAMG00000001919	AFF1	99	91.171	ENSMPUG00000002270	AFF1	82	91.071	Mustela_putorius_furo
ENSUAMG00000001919	AFF1	99	80.259	ENSMLUG00000000293	AFF1	81	79.761	Myotis_lucifugus
ENSUAMG00000001919	AFF1	99	75.724	ENSNLEG00000009429	AFF1	81	75.272	Nomascus_leucogenys
ENSUAMG00000001919	AFF1	99	69.444	ENSOPRG00000017154	-	82	71.032	Ochotona_princeps
ENSUAMG00000001919	AFF1	99	62.192	ENSODEG00000007407	AFF1	88	62.093	Octodon_degus
ENSUAMG00000001919	AFF1	99	56.458	ENSOANG00000013624	AFF1	80	56.500	Ornithorhynchus_anatinus
ENSUAMG00000001919	AFF1	99	75.576	ENSOCUG00000002105	AFF1	79	74.876	Oryctolagus_cuniculus
ENSUAMG00000001919	AFF1	64	57.450	ENSOGAG00000031211	-	71	57.781	Otolemur_garnettii
ENSUAMG00000001919	AFF1	99	78.728	ENSOARG00000004522	AFF1	81	79.125	Ovis_aries
ENSUAMG00000001919	AFF1	99	80.777	ENSPPAG00000029196	AFF1	81	80.876	Pan_paniscus
ENSUAMG00000001919	AFF1	99	85.842	ENSPPRG00000023590	AFF1	82	85.842	Panthera_pardus
ENSUAMG00000001919	AFF1	80	85.348	ENSPTIG00000011838	AFF1	78	85.348	Panthera_tigris_altaica
ENSUAMG00000001919	AFF1	99	80.677	ENSPTRG00000016255	AFF1	78	88.421	Pan_troglodytes
ENSUAMG00000001919	AFF1	99	77.734	ENSPANG00000016722	AFF1	82	78.109	Papio_anubis
ENSUAMG00000001919	AFF1	99	51.181	ENSPSIG00000003759	AFF1	81	50.541	Pelodiscus_sinensis
ENSUAMG00000001919	AFF1	72	33.540	ENSPSIG00000010309	AFF2	67	34.293	Pelodiscus_sinensis
ENSUAMG00000001919	AFF1	99	63.857	ENSPEMG00000000785	Aff1	83	64.763	Peromyscus_maniculatus_bairdii
ENSUAMG00000001919	AFF1	57	52.703	ENSPEMG00000014802	Aff3	74	53.333	Peromyscus_maniculatus_bairdii
ENSUAMG00000001919	AFF1	92	80.645	ENSPCIG00000011395	AFF1	80	80.645	Phascolarctos_cinereus
ENSUAMG00000001919	AFF1	99	77.413	ENSPPYG00000014910	AFF1	81	77.811	Pongo_abelii
ENSUAMG00000001919	AFF1	68	93.478	ENSPCAG00000005658	AFF1	55	93.478	Procavia_capensis
ENSUAMG00000001919	AFF1	94	85.214	ENSPVAG00000014455	AFF1	82	77.767	Pteropus_vampyrus
ENSUAMG00000001919	AFF1	99	65.916	ENSRNOG00000002232	Aff1	84	65.524	Rattus_norvegicus
ENSUAMG00000001919	AFF1	99	80.040	ENSRBIG00000032242	AFF1	81	80.338	Rhinopithecus_bieti
ENSUAMG00000001919	AFF1	93	86.802	ENSRROG00000045716	AFF1	81	80.437	Rhinopithecus_roxellana
ENSUAMG00000001919	AFF1	99	78.607	ENSSBOG00000035401	AFF1	81	79.303	Saimiri_boliviensis_boliviensis
ENSUAMG00000001919	AFF1	99	55.862	ENSSHAG00000004203	AFF1	81	54.975	Sarcophilus_harrisii
ENSUAMG00000001919	AFF1	79	59.155	ENSSFOG00015018646	aff4	66	58.904	Scleropages_formosus
ENSUAMG00000001919	AFF1	72	31.100	ENSSMAG00000007062	-	93	35.366	Scophthalmus_maximus
ENSUAMG00000001919	AFF1	72	35.638	ENSSDUG00000019498	aff4	59	35.333	Seriola_dumerili
ENSUAMG00000001919	AFF1	72	35.638	ENSSLDG00000007683	aff4	59	35.215	Seriola_lalandi_dorsalis
ENSUAMG00000001919	AFF1	65	51.297	ENSSARG00000013296	-	77	52.161	Sorex_araneus
ENSUAMG00000001919	AFF1	99	53.680	ENSSPUG00000001574	AFF1	81	52.519	Sphenodon_punctatus
ENSUAMG00000001919	AFF1	57	33.333	ENSSPAG00000012370	aff4	70	32.363	Stegastes_partitus
ENSUAMG00000001919	AFF1	99	45.776	ENSTGUG00000002726	AFF1	80	44.401	Taeniopygia_guttata
ENSUAMG00000001919	AFF1	72	36.063	ENSTRUG00000008087	aff4	59	36.631	Takifugu_rubripes
ENSUAMG00000001919	AFF1	72	36.745	ENSTNIG00000018201	aff4	60	36.631	Tetraodon_nigroviridis
ENSUAMG00000001919	AFF1	97	75.025	ENSTBEG00000007536	AFF1	81	75.375	Tupaia_belangeri
ENSUAMG00000001919	AFF1	99	80.539	ENSTTRG00000005595	AFF1	81	82.136	Tursiops_truncatus
ENSUAMG00000001919	AFF1	81	98.095	ENSUMAG00000025433	AFF1	65	98.095	Ursus_maritimus
ENSUAMG00000001919	AFF1	99	90.208	ENSVVUG00000009263	AFF1	82	90.504	Vulpes_vulpes
ENSUAMG00000001919	AFF1	79	58.209	ENSXMAG00000001642	aff4	51	58.209	Xiphophorus_maculatus