EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000002067 (Gene tree)
Gene ID: -
Gene Symbol: TRMT12
Alias: FLJ20772|TYW2|Trm12
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 1311 bases
Position: chrLZNR01009169.1:8060-9370
Accession: 26091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000002240	Met_10	PF02475.16	7.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000002554	TRMT12-201	1311	-	ENSUAMP00000002240	436 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000002067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000002067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000002067	TRMT12	99	86.636	ENSG00000183665	TRMT12	97	86.636	Homo_sapiens
ENSUAMG00000002067	TRMT12	95	50.605	ENSAPOG00000011979	trmt12	96	50.605	Acanthochromis_polyacanthus
ENSUAMG00000002067	TRMT12	99	97.235	ENSAMEG00000019612	TRMT12	97	97.235	Ailuropoda_melanoleuca
ENSUAMG00000002067	TRMT12	93	50.369	ENSACIG00000012982	trmt12	99	50.369	Amphilophus_citrinellus
ENSUAMG00000002067	TRMT12	92	52.120	ENSAOCG00000020570	trmt12	98	52.120	Amphiprion_ocellaris
ENSUAMG00000002067	TRMT12	93	51.106	ENSAPEG00000006335	trmt12	98	51.870	Amphiprion_percula
ENSUAMG00000002067	TRMT12	95	51.208	ENSATEG00000018316	trmt12	97	51.208	Anabas_testudineus
ENSUAMG00000002067	TRMT12	95	50.847	ENSACLG00000001008	trmt12	96	50.847	Astatotilapia_calliptera
ENSUAMG00000002067	TRMT12	96	51.643	ENSAMXG00000040366	trmt12	97	51.643	Astyanax_mexicanus
ENSUAMG00000002067	TRMT12	99	85.945	ENSBTAG00000020398	TRMT12	94	85.945	Bos_taurus
ENSUAMG00000002067	TRMT12	50	40.092	WBGene00009586	F40F9.10	50	38.889	Caenorhabditis_elegans
ENSUAMG00000002067	TRMT12	99	85.023	ENSCJAG00000022174	TRMT12	97	85.023	Callithrix_jacchus
ENSUAMG00000002067	TRMT12	99	90.323	ENSCAFG00000001040	TRMT12	99	90.323	Canis_familiaris
ENSUAMG00000002067	TRMT12	99	90.323	ENSCAFG00020006500	TRMT12	99	90.323	Canis_lupus_dingo
ENSUAMG00000002067	TRMT12	99	86.279	ENSCHIG00000016574	TRMT12	98	86.279	Capra_hircus
ENSUAMG00000002067	TRMT12	99	80.876	ENSCPOG00000026520	TRMT12	98	80.876	Cavia_porcellus
ENSUAMG00000002067	TRMT12	99	85.945	ENSCSAG00000018615	TRMT12	97	85.945	Chlorocebus_sabaeus
ENSUAMG00000002067	TRMT12	99	62.500	ENSCPBG00000014290	TRMT12	98	62.500	Chrysemys_picta_bellii
ENSUAMG00000002067	TRMT12	71	44.937	ENSCING00000019633	-	97	44.937	Ciona_intestinalis
ENSUAMG00000002067	TRMT12	73	46.417	ENSCSAVG00000000415	-	93	46.417	Ciona_savignyi
ENSUAMG00000002067	TRMT12	100	63.348	ENSCGRG00001014834	Trmt12	100	63.348	Cricetulus_griseus_chok1gshd
ENSUAMG00000002067	TRMT12	95	49.879	ENSCSEG00000002675	trmt12	92	49.879	Cynoglossus_semilaevis
ENSUAMG00000002067	TRMT12	96	50.358	ENSCVAG00000005590	trmt12	98	50.358	Cyprinodon_variegatus
ENSUAMG00000002067	TRMT12	96	50.831	ENSDARG00000060338	trmt12	96	53.846	Danio_rerio
ENSUAMG00000002067	TRMT12	99	78.111	ENSETEG00000009373	TRMT12	97	78.111	Echinops_telfairi
ENSUAMG00000002067	TRMT12	99	87.558	ENSEASG00005022441	TRMT12	99	87.558	Equus_asinus_asinus
ENSUAMG00000002067	TRMT12	99	80.184	ENSEEUG00000004844	TRMT12	97	80.184	Erinaceus_europaeus
ENSUAMG00000002067	TRMT12	96	50.120	ENSELUG00000004240	trmt12	100	50.758	Esox_lucius
ENSUAMG00000002067	TRMT12	66	65.035	ENSFALG00000003825	TRMT12	99	69.545	Ficedula_albicollis
ENSUAMG00000002067	TRMT12	99	83.180	ENSFDAG00000016647	TRMT12	99	83.180	Fukomys_damarensis
ENSUAMG00000002067	TRMT12	92	43.035	ENSFHEG00000017338	trmt12	96	43.035	Fundulus_heteroclitus
ENSUAMG00000002067	TRMT12	81	62.994	ENSGALG00000006773	TRMT12	77	62.994	Gallus_gallus
ENSUAMG00000002067	TRMT12	95	49.398	ENSGAFG00000020056	trmt12	96	49.398	Gambusia_affinis
ENSUAMG00000002067	TRMT12	89	52.062	ENSGACG00000017351	trmt12	100	50.852	Gasterosteus_aculeatus
ENSUAMG00000002067	TRMT12	97	64.516	ENSGAGG00000006032	TRMT12	98	64.516	Gopherus_agassizii
ENSUAMG00000002067	TRMT12	95	51.090	ENSHBUG00000016412	trmt12	96	51.090	Haplochromis_burtoni
ENSUAMG00000002067	TRMT12	99	82.719	ENSHGLG00000020498	TRMT12	99	82.719	Heterocephalus_glaber_female
ENSUAMG00000002067	TRMT12	99	82.719	ENSHGLG00100020132	TRMT12	99	82.719	Heterocephalus_glaber_male
ENSUAMG00000002067	TRMT12	95	49.517	ENSHCOG00000005050	trmt12	94	52.571	Hippocampus_comes
ENSUAMG00000002067	TRMT12	97	51.408	ENSIPUG00000018011	trmt12	91	51.408	Ictalurus_punctatus
ENSUAMG00000002067	TRMT12	99	85.023	ENSSTOG00000030617	TRMT12	98	85.023	Ictidomys_tridecemlineatus
ENSUAMG00000002067	TRMT12	95	50.962	ENSKMAG00000000891	trmt12	96	50.962	Kryptolebias_marmoratus
ENSUAMG00000002067	TRMT12	55	56.017	ENSLBEG00000017456	-	88	57.322	Labrus_bergylta
ENSUAMG00000002067	TRMT12	95	48.193	ENSLBEG00000028712	trmt12	96	48.193	Labrus_bergylta
ENSUAMG00000002067	TRMT12	99	57.494	ENSLACG00000015869	TRMT12	98	57.494	Latimeria_chalumnae
ENSUAMG00000002067	TRMT12	97	54.588	ENSLOCG00000015290	trmt12	99	54.588	Lepisosteus_oculatus
ENSUAMG00000002067	TRMT12	99	83.871	ENSLAFG00000012519	TRMT12	99	83.871	Loxodonta_africana
ENSUAMG00000002067	TRMT12	99	86.866	ENSMMUG00000015490	TRMT12	98	86.866	Macaca_mulatta
ENSUAMG00000002067	TRMT12	95	50.847	ENSMAMG00000020311	trmt12	96	50.847	Mastacembelus_armatus
ENSUAMG00000002067	TRMT12	95	51.332	ENSMZEG00005007349	trmt12	96	51.332	Maylandia_zebra
ENSUAMG00000002067	TRMT12	98	59.485	ENSMGAG00000004174	TRMT12	95	59.765	Meleagris_gallopavo
ENSUAMG00000002067	TRMT12	93	50.860	ENSMMOG00000000412	trmt12	95	50.860	Mola_mola
ENSUAMG00000002067	TRMT12	99	67.356	ENSMODG00000021403	-	97	67.356	Monodelphis_domestica
ENSUAMG00000002067	TRMT12	99	67.517	ENSMODG00000011798	-	88	67.517	Monodelphis_domestica
ENSUAMG00000002067	TRMT12	95	51.332	ENSMALG00000008668	trmt12	96	51.332	Monopterus_albus
ENSUAMG00000002067	TRMT12	99	79.493	MGP_CAROLIEiJ_G0019820	Trmt12	97	79.493	Mus_caroli
ENSUAMG00000002067	TRMT12	99	79.310	ENSMUSG00000037085	Trmt12	97	79.310	Mus_musculus
ENSUAMG00000002067	TRMT12	99	79.724	MGP_PahariEiJ_G0019829	Trmt12	97	79.724	Mus_pahari
ENSUAMG00000002067	TRMT12	99	78.851	MGP_SPRETEiJ_G0020717	Trmt12	97	78.851	Mus_spretus
ENSUAMG00000002067	TRMT12	99	92.166	ENSMPUG00000019150	TRMT12	97	92.166	Mustela_putorius_furo
ENSUAMG00000002067	TRMT12	99	85.484	ENSMLUG00000003753	TRMT12	99	85.484	Myotis_lucifugus
ENSUAMG00000002067	TRMT12	99	81.106	ENSNGAG00000014548	Trmt12	99	81.106	Nannospalax_galili
ENSUAMG00000002067	TRMT12	94	50.608	ENSNBRG00000021510	trmt12	96	50.608	Neolamprologus_brichardi
ENSUAMG00000002067	TRMT12	99	71.494	ENSOPRG00000008067	TRMT12	98	71.494	Ochotona_princeps
ENSUAMG00000002067	TRMT12	99	81.797	ENSODEG00000018933	TRMT12	99	81.797	Octodon_degus
ENSUAMG00000002067	TRMT12	95	51.332	ENSONIG00000002614	trmt12	96	51.332	Oreochromis_niloticus
ENSUAMG00000002067	TRMT12	99	63.532	ENSOANG00000009987	TRMT12	99	63.532	Ornithorhynchus_anatinus
ENSUAMG00000002067	TRMT12	100	79.405	ENSOCUG00000026379	TRMT12	97	79.405	Oryctolagus_cuniculus
ENSUAMG00000002067	TRMT12	95	52.058	ENSORLG00000001280	trmt12	96	52.300	Oryzias_latipes
ENSUAMG00000002067	TRMT12	95	51.574	ENSORLG00020000708	trmt12	96	51.816	Oryzias_latipes_hni
ENSUAMG00000002067	TRMT12	95	51.574	ENSORLG00015012344	trmt12	96	51.816	Oryzias_latipes_hsok
ENSUAMG00000002067	TRMT12	95	51.332	ENSOMEG00000015267	trmt12	95	51.332	Oryzias_melastigma
ENSUAMG00000002067	TRMT12	99	84.793	ENSOGAG00000015845	TRMT12	99	84.793	Otolemur_garnettii
ENSUAMG00000002067	TRMT12	97	54.824	ENSPKIG00000004640	trmt12	99	55.206	Paramormyrops_kingsleyae
ENSUAMG00000002067	TRMT12	60	69.888	ENSPSIG00000003476	TRMT12	99	69.888	Pelodiscus_sinensis
ENSUAMG00000002067	TRMT12	96	46.763	ENSPMGG00000016356	trmt12	94	46.763	Periophthalmus_magnuspinnatus
ENSUAMG00000002067	TRMT12	99	68.506	ENSPCIG00000002967	TRMT12	89	68.506	Phascolarctos_cinereus
ENSUAMG00000002067	TRMT12	97	48.122	ENSPFOG00000016931	trmt12	98	48.122	Poecilia_formosa
ENSUAMG00000002067	TRMT12	95	48.441	ENSPLAG00000020621	trmt12	96	48.441	Poecilia_latipinna
ENSUAMG00000002067	TRMT12	95	50.120	ENSPMEG00000000818	trmt12	96	50.120	Poecilia_mexicana
ENSUAMG00000002067	TRMT12	95	48.193	ENSPREG00000011621	trmt12	96	48.426	Poecilia_reticulata
ENSUAMG00000002067	TRMT12	99	86.636	ENSPPYG00000018866	TRMT12	97	86.636	Pongo_abelii
ENSUAMG00000002067	TRMT12	99	81.336	ENSPCAG00000000556	TRMT12	97	81.336	Procavia_capensis
ENSUAMG00000002067	TRMT12	99	86.175	ENSPVAG00000009149	TRMT12	98	86.175	Pteropus_vampyrus
ENSUAMG00000002067	TRMT12	93	50.614	ENSPNYG00000010696	trmt12	99	50.614	Pundamilia_nyererei
ENSUAMG00000002067	TRMT12	96	49.882	ENSPNAG00000019028	trmt12	97	49.882	Pygocentrus_nattereri
ENSUAMG00000002067	TRMT12	99	82.488	ENSRNOG00000008978	Trmt12	99	82.488	Rattus_norvegicus
ENSUAMG00000002067	TRMT12	99	67.051	ENSSHAG00000003345	TRMT12	97	67.051	Sarcophilus_harrisii
ENSUAMG00000002067	TRMT12	97	51.636	ENSSFOG00015006090	trmt12	99	51.636	Scleropages_formosus
ENSUAMG00000002067	TRMT12	95	50.966	ENSSMAG00000013247	trmt12	96	50.966	Scophthalmus_maximus
ENSUAMG00000002067	TRMT12	93	51.351	ENSSDUG00000006168	trmt12	96	51.351	Seriola_dumerili
ENSUAMG00000002067	TRMT12	95	50.847	ENSSLDG00000025007	trmt12	96	50.847	Seriola_lalandi_dorsalis
ENSUAMG00000002067	TRMT12	99	59.050	ENSSPUG00000005321	TRMT12	98	59.050	Sphenodon_punctatus
ENSUAMG00000002067	TRMT12	95	50.605	ENSSPAG00000009435	trmt12	93	50.605	Stegastes_partitus
ENSUAMG00000002067	TRMT12	97	57.009	ENSTGUG00000002280	TRMT12	99	57.077	Taeniopygia_guttata
ENSUAMG00000002067	TRMT12	96	49.881	ENSTRUG00000011548	trmt12	95	49.760	Takifugu_rubripes
ENSUAMG00000002067	TRMT12	95	49.289	ENSTNIG00000016866	trmt12	97	49.289	Tetraodon_nigroviridis
ENSUAMG00000002067	TRMT12	99	87.097	ENSVPAG00000006519	TRMT12	98	87.097	Vicugna_pacos
ENSUAMG00000002067	TRMT12	98	89.930	ENSVVUG00000016790	TRMT12	96	89.930	Vulpes_vulpes
ENSUAMG00000002067	TRMT12	99	55.023	ENSXETG00000009641	trmt12	98	55.023	Xenopus_tropicalis
ENSUAMG00000002067	TRMT12	95	49.761	ENSXCOG00000016505	trmt12	99	46.838	Xiphophorus_couchianus
ENSUAMG00000002067	TRMT12	95	49.519	ENSXMAG00000025318	trmt12	96	49.519	Xiphophorus_maculatus