EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000002159 (Gene tree)
Gene ID: -
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 9346 bases
Position: chrLZNR01015124.1:60376-69721
Accession: 20992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000002351	Ribonuc_P_40	PF08584.11	1.5e-93	1	1
ENSUAMP00000002378	Ribonuc_P_40	PF08584.11	2.3e-93	1	1
ENSUAMP00000002389	Ribonuc_P_40	PF08584.11	4.6e-76	1	1
ENSUAMP00000002394	Ribonuc_P_40	PF08584.11	4.2e-55	1	2
ENSUAMP00000002394	Ribonuc_P_40	PF08584.11	4.2e-55	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000002685	RPP40-201	1317	-	ENSUAMP00000002351	303 (aa)	-	-
ENSUAMT00000002732	RPP40-204	909	-	ENSUAMP00000002394	302 (aa)	-	-
ENSUAMT00000002727	RPP40-203	1023	-	ENSUAMP00000002389	340 (aa)	-	-
ENSUAMT00000002714	RPP40-202	1092	-	ENSUAMP00000002378	363 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000002159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000002159's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000002159	RPP40	100	86.777	ENSG00000124787	RPP40	100	86.777	Homo_sapiens
ENSUAMG00000002159	RPP40	88	32.107	ENSAPOG00000008660	rpp40	92	32.107	Acanthochromis_polyacanthus
ENSUAMG00000002159	RPP40	100	98.350	ENSAMEG00000012938	RPP40	100	98.347	Ailuropoda_melanoleuca
ENSUAMG00000002159	RPP40	98	37.624	ENSACIG00000003617	rpp40	98	37.293	Amphilophus_citrinellus
ENSUAMG00000002159	RPP40	98	39.262	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSUAMG00000002159	RPP40	98	39.262	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSUAMG00000002159	RPP40	98	40.000	ENSATEG00000006584	rpp40	99	39.335	Anabas_testudineus
ENSUAMG00000002159	RPP40	99	67.667	ENSAPLG00000005691	RPP40	99	67.667	Anas_platyrhynchos
ENSUAMG00000002159	RPP40	99	67.224	ENSACAG00000006550	RPP40	88	65.181	Anolis_carolinensis
ENSUAMG00000002159	RPP40	100	85.399	ENSANAG00000029246	RPP40	100	85.399	Aotus_nancymaae
ENSUAMG00000002159	RPP40	98	38.592	ENSACLG00000015883	rpp40	96	38.592	Astatotilapia_calliptera
ENSUAMG00000002159	RPP40	98	48.322	ENSAMXG00000001755	rpp40	99	47.899	Astyanax_mexicanus
ENSUAMG00000002159	RPP40	100	88.154	ENSBTAG00000003332	RPP40	100	88.154	Bos_taurus
ENSUAMG00000002159	RPP40	100	85.950	ENSCJAG00000021373	RPP40	100	85.950	Callithrix_jacchus
ENSUAMG00000002159	RPP40	100	94.215	ENSCAFG00000009435	RPP40	100	94.215	Canis_familiaris
ENSUAMG00000002159	RPP40	100	94.215	ENSCAFG00020013380	RPP40	100	94.215	Canis_lupus_dingo
ENSUAMG00000002159	RPP40	100	87.052	ENSCHIG00000016849	RPP40	100	87.052	Capra_hircus
ENSUAMG00000002159	RPP40	100	88.705	ENSTSYG00000032857	RPP40	100	88.705	Carlito_syrichta
ENSUAMG00000002159	RPP40	100	79.208	ENSCAPG00000004957	RPP40	98	79.205	Cavia_aperea
ENSUAMG00000002159	RPP40	100	86.777	ENSCPOG00000005855	RPP40	100	86.777	Cavia_porcellus
ENSUAMG00000002159	RPP40	100	85.950	ENSCCAG00000019809	RPP40	100	85.950	Cebus_capucinus
ENSUAMG00000002159	RPP40	100	86.226	ENSCATG00000038787	RPP40	100	86.226	Cercocebus_atys
ENSUAMG00000002159	RPP40	100	86.501	ENSCLAG00000003235	RPP40	100	86.501	Chinchilla_lanigera
ENSUAMG00000002159	RPP40	100	86.501	ENSCSAG00000007307	RPP40	100	86.501	Chlorocebus_sabaeus
ENSUAMG00000002159	RPP40	83	70.400	ENSCHOG00000005856	-	100	70.400	Choloepus_hoffmanni
ENSUAMG00000002159	RPP40	99	71.854	ENSCPBG00000009003	RPP40	99	70.556	Chrysemys_picta_bellii
ENSUAMG00000002159	RPP40	100	86.777	ENSCANG00000033965	RPP40	100	86.777	Colobus_angolensis_palliatus
ENSUAMG00000002159	RPP40	100	81.188	ENSCGRG00001018328	Rpp40	100	80.992	Cricetulus_griseus_chok1gshd
ENSUAMG00000002159	RPP40	100	81.188	ENSCGRG00000011344	Rpp40	100	80.992	Cricetulus_griseus_crigri
ENSUAMG00000002159	RPP40	98	35.112	ENSCSEG00000015006	-	98	35.112	Cynoglossus_semilaevis
ENSUAMG00000002159	RPP40	89	34.559	ENSCVAG00000012169	rpp40	100	34.559	Cyprinodon_variegatus
ENSUAMG00000002159	RPP40	99	49.169	ENSDARG00000017605	rpp40	99	49.441	Danio_rerio
ENSUAMG00000002159	RPP40	82	84.512	ENSDNOG00000048136	RPP40	99	84.512	Dasypus_novemcinctus
ENSUAMG00000002159	RPP40	100	84.848	ENSDORG00000029944	-	100	84.848	Dipodomys_ordii
ENSUAMG00000002159	RPP40	100	64.171	ENSDORG00000011196	-	100	64.171	Dipodomys_ordii
ENSUAMG00000002159	RPP40	100	83.146	ENSETEG00000007458	RPP40	100	69.421	Echinops_telfairi
ENSUAMG00000002159	RPP40	98	44.507	ENSEBUG00000000386	rpp40	99	44.507	Eptatretus_burgeri
ENSUAMG00000002159	RPP40	100	91.460	ENSEASG00005012116	RPP40	80	91.460	Equus_asinus_asinus
ENSUAMG00000002159	RPP40	100	91.736	ENSECAG00000017247	RPP40	80	91.736	Equus_caballus
ENSUAMG00000002159	RPP40	82	70.034	ENSEEUG00000012087	RPP40	100	70.034	Erinaceus_europaeus
ENSUAMG00000002159	RPP40	98	48.161	ENSELUG00000017004	rpp40	99	47.486	Esox_lucius
ENSUAMG00000002159	RPP40	100	92.837	ENSFCAG00000009249	RPP40	100	92.837	Felis_catus
ENSUAMG00000002159	RPP40	99	67.516	ENSFALG00000013166	RPP40	100	65.749	Ficedula_albicollis
ENSUAMG00000002159	RPP40	97	69.153	ENSFDAG00000000265	-	100	69.153	Fukomys_damarensis
ENSUAMG00000002159	RPP40	100	87.328	ENSFDAG00000013001	-	100	87.328	Fukomys_damarensis
ENSUAMG00000002159	RPP40	98	38.936	ENSFHEG00000021429	rpp40	88	38.936	Fundulus_heteroclitus
ENSUAMG00000002159	RPP40	97	39.661	ENSGMOG00000018653	rpp40	100	39.130	Gadus_morhua
ENSUAMG00000002159	RPP40	99	65.563	ENSGALG00000036074	RPP40	99	64.444	Gallus_gallus
ENSUAMG00000002159	RPP40	98	33.893	ENSGAFG00000004189	-	98	33.893	Gambusia_affinis
ENSUAMG00000002159	RPP40	98	38.936	ENSGACG00000002472	rpp40	99	38.936	Gasterosteus_aculeatus
ENSUAMG00000002159	RPP40	99	72.185	ENSGAGG00000012918	RPP40	99	70.833	Gopherus_agassizii
ENSUAMG00000002159	RPP40	100	87.052	ENSGGOG00000013764	RPP40	100	87.052	Gorilla_gorilla
ENSUAMG00000002159	RPP40	98	38.538	ENSHBUG00000009378	rpp40	94	37.838	Haplochromis_burtoni
ENSUAMG00000002159	RPP40	100	87.328	ENSHGLG00000004871	RPP40	100	87.328	Heterocephalus_glaber_female
ENSUAMG00000002159	RPP40	100	87.328	ENSHGLG00100002080	RPP40	100	87.328	Heterocephalus_glaber_male
ENSUAMG00000002159	RPP40	97	32.203	ENSHCOG00000013264	-	93	31.805	Hippocampus_comes
ENSUAMG00000002159	RPP40	99	49.383	ENSIPUG00000008951	RPP40	99	46.111	Ictalurus_punctatus
ENSUAMG00000002159	RPP40	100	88.154	ENSSTOG00000011199	RPP40	100	88.154	Ictidomys_tridecemlineatus
ENSUAMG00000002159	RPP40	100	81.765	ENSJJAG00000020629	Rpp40	100	81.765	Jaculus_jaculus
ENSUAMG00000002159	RPP40	98	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
ENSUAMG00000002159	RPP40	98	38.936	ENSLBEG00000022724	rpp40	99	38.936	Labrus_bergylta
ENSUAMG00000002159	RPP40	99	58.889	ENSLACG00000014848	RPP40	99	58.889	Latimeria_chalumnae
ENSUAMG00000002159	RPP40	100	55.556	ENSLOCG00000011650	rpp40	100	52.342	Lepisosteus_oculatus
ENSUAMG00000002159	RPP40	100	87.789	ENSLAFG00000007530	RPP40	100	87.789	Loxodonta_africana
ENSUAMG00000002159	RPP40	100	86.226	ENSMFAG00000043100	RPP40	100	86.226	Macaca_fascicularis
ENSUAMG00000002159	RPP40	100	86.501	ENSMMUG00000004966	RPP40	100	86.501	Macaca_mulatta
ENSUAMG00000002159	RPP40	100	86.777	ENSMNEG00000041986	RPP40	100	86.777	Macaca_nemestrina
ENSUAMG00000002159	RPP40	98	76.751	ENSMLEG00000040851	RPP40	100	83.523	Mandrillus_leucophaeus
ENSUAMG00000002159	RPP40	98	39.597	ENSMAMG00000019551	rpp40	98	39.496	Mastacembelus_armatus
ENSUAMG00000002159	RPP40	98	40.268	ENSMZEG00005019475	rpp40	99	39.058	Maylandia_zebra
ENSUAMG00000002159	RPP40	99	66.556	ENSMGAG00000004009	RPP40	99	61.667	Meleagris_gallopavo
ENSUAMG00000002159	RPP40	100	86.471	ENSMAUG00000010268	Rpp40	100	86.471	Mesocricetus_auratus
ENSUAMG00000002159	RPP40	100	87.879	ENSMICG00000003297	RPP40	100	87.353	Microcebus_murinus
ENSUAMG00000002159	RPP40	100	84.706	ENSMOCG00000000305	Rpp40	100	84.706	Microtus_ochrogaster
ENSUAMG00000002159	RPP40	98	34.174	ENSMMOG00000020591	-	99	34.174	Mola_mola
ENSUAMG00000002159	RPP40	100	81.044	ENSMODG00000009826	RPP40	100	81.044	Monodelphis_domestica
ENSUAMG00000002159	RPP40	98	38.591	ENSMALG00000020133	rpp40	99	38.375	Monopterus_albus
ENSUAMG00000002159	RPP40	100	85.950	MGP_CAROLIEiJ_G0018429	Rpp40	100	85.950	Mus_caroli
ENSUAMG00000002159	RPP40	100	86.777	ENSMUSG00000021418	Rpp40	100	86.777	Mus_musculus
ENSUAMG00000002159	RPP40	100	86.471	MGP_PahariEiJ_G0019497	Rpp40	100	86.471	Mus_pahari
ENSUAMG00000002159	RPP40	100	86.501	MGP_SPRETEiJ_G0019309	Rpp40	100	86.501	Mus_spretus
ENSUAMG00000002159	RPP40	100	95.041	ENSMPUG00000000530	RPP40	93	95.041	Mustela_putorius_furo
ENSUAMG00000002159	RPP40	100	89.532	ENSMLUG00000000501	RPP40	100	89.532	Myotis_lucifugus
ENSUAMG00000002159	RPP40	95	76.590	ENSNGAG00000022529	-	100	76.590	Nannospalax_galili
ENSUAMG00000002159	RPP40	100	87.328	ENSNGAG00000023955	-	100	87.328	Nannospalax_galili
ENSUAMG00000002159	RPP40	98	35.762	ENSNBRG00000017465	rpp40	86	37.500	Neolamprologus_brichardi
ENSUAMG00000002159	RPP40	100	85.950	ENSNLEG00000034397	RPP40	100	85.950	Nomascus_leucogenys
ENSUAMG00000002159	RPP40	100	75.482	ENSMEUG00000005300	RPP40	100	75.482	Notamacropus_eugenii
ENSUAMG00000002159	RPP40	100	79.890	ENSODEG00000018153	-	100	79.890	Octodon_degus
ENSUAMG00000002159	RPP40	100	75.908	ENSODEG00000006170	-	100	82.609	Octodon_degus
ENSUAMG00000002159	RPP40	100	83.747	ENSODEG00000007255	-	100	83.747	Octodon_degus
ENSUAMG00000002159	RPP40	98	39.262	ENSONIG00000014016	rpp40	99	38.227	Oreochromis_niloticus
ENSUAMG00000002159	RPP40	99	75.248	ENSOANG00000001200	RPP40	99	75.248	Ornithorhynchus_anatinus
ENSUAMG00000002159	RPP40	99	78.667	ENSOCUG00000000354	RPP40	99	76.731	Oryctolagus_cuniculus
ENSUAMG00000002159	RPP40	99	36.667	ENSORLG00000008242	-	100	36.667	Oryzias_latipes
ENSUAMG00000002159	RPP40	99	36.389	ENSORLG00020013745	-	91	36.389	Oryzias_latipes_hni
ENSUAMG00000002159	RPP40	99	36.944	ENSORLG00015000887	-	100	36.944	Oryzias_latipes_hsok
ENSUAMG00000002159	RPP40	99	36.944	ENSOMEG00000002747	rpp40	100	36.944	Oryzias_melastigma
ENSUAMG00000002159	RPP40	100	88.705	ENSOGAG00000006055	RPP40	100	88.705	Otolemur_garnettii
ENSUAMG00000002159	RPP40	100	86.139	ENSOARG00000018783	RPP40	100	86.139	Ovis_aries
ENSUAMG00000002159	RPP40	100	86.777	ENSPPAG00000023703	RPP40	100	86.777	Pan_paniscus
ENSUAMG00000002159	RPP40	100	92.562	ENSPPRG00000005612	RPP40	100	92.562	Panthera_pardus
ENSUAMG00000002159	RPP40	100	84.573	ENSPTIG00000018847	RPP40	100	84.573	Panthera_tigris_altaica
ENSUAMG00000002159	RPP40	100	87.052	ENSPTRG00000017690	RPP40	100	87.052	Pan_troglodytes
ENSUAMG00000002159	RPP40	100	86.777	ENSPANG00000017865	RPP40	100	86.777	Papio_anubis
ENSUAMG00000002159	RPP40	98	50.838	ENSPKIG00000006311	rpp40	99	50.838	Paramormyrops_kingsleyae
ENSUAMG00000002159	RPP40	73	69.369	ENSPSIG00000007854	RPP40	100	69.369	Pelodiscus_sinensis
ENSUAMG00000002159	RPP40	97	80.887	ENSPEMG00000020809	Rpp40	91	81.210	Peromyscus_maniculatus_bairdii
ENSUAMG00000002159	RPP40	90	46.350	ENSPMAG00000008412	rpp40	99	46.350	Petromyzon_marinus
ENSUAMG00000002159	RPP40	100	81.818	ENSPCIG00000010682	RPP40	100	81.818	Phascolarctos_cinereus
ENSUAMG00000002159	RPP40	98	36.000	ENSPFOG00000011460	rpp40	98	35.655	Poecilia_formosa
ENSUAMG00000002159	RPP40	98	35.906	ENSPLAG00000001334	rpp40	99	35.854	Poecilia_latipinna
ENSUAMG00000002159	RPP40	98	36.242	ENSPMEG00000007721	rpp40	99	35.854	Poecilia_mexicana
ENSUAMG00000002159	RPP40	98	36.975	ENSPREG00000009215	rpp40	99	36.975	Poecilia_reticulata
ENSUAMG00000002159	RPP40	100	86.501	ENSPPYG00000016194	RPP40	100	86.501	Pongo_abelii
ENSUAMG00000002159	RPP40	51	85.870	ENSPCAG00000002700	-	99	85.870	Procavia_capensis
ENSUAMG00000002159	RPP40	100	89.256	ENSPCOG00000003907	RPP40	100	89.256	Propithecus_coquereli
ENSUAMG00000002159	RPP40	100	93.388	ENSPVAG00000011325	RPP40	100	93.388	Pteropus_vampyrus
ENSUAMG00000002159	RPP40	98	38.926	ENSPNYG00000004432	rpp40	98	38.926	Pundamilia_nyererei
ENSUAMG00000002159	RPP40	98	48.495	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSUAMG00000002159	RPP40	100	85.124	ENSRNOG00000016226	Rpp40	100	85.124	Rattus_norvegicus
ENSUAMG00000002159	RPP40	100	87.052	ENSRBIG00000035800	RPP40	100	87.052	Rhinopithecus_bieti
ENSUAMG00000002159	RPP40	100	87.052	ENSRROG00000039116	RPP40	100	87.052	Rhinopithecus_roxellana
ENSUAMG00000002159	RPP40	100	85.675	ENSSBOG00000020297	RPP40	100	85.675	Saimiri_boliviensis_boliviensis
ENSUAMG00000002159	RPP40	92	78.777	ENSSHAG00000002102	RPP40	100	78.777	Sarcophilus_harrisii
ENSUAMG00000002159	RPP40	98	50.836	ENSSFOG00015001142	rpp40	81	49.036	Scleropages_formosus
ENSUAMG00000002159	RPP40	98	38.095	ENSSDUG00000007202	rpp40	99	38.095	Seriola_dumerili
ENSUAMG00000002159	RPP40	98	38.375	ENSSLDG00000017563	rpp40	99	38.375	Seriola_lalandi_dorsalis
ENSUAMG00000002159	RPP40	99	70.530	ENSSPUG00000017487	-	99	68.889	Sphenodon_punctatus
ENSUAMG00000002159	RPP40	97	68.136	ENSSPUG00000018950	-	100	68.136	Sphenodon_punctatus
ENSUAMG00000002159	RPP40	98	39.394	ENSSPAG00000022716	rpp40	99	38.375	Stegastes_partitus
ENSUAMG00000002159	RPP40	100	87.603	ENSSSCG00000000998	RPP40	100	87.603	Sus_scrofa
ENSUAMG00000002159	RPP40	58	68.927	ENSTGUG00000015246	-	100	68.927	Taeniopygia_guttata
ENSUAMG00000002159	RPP40	99	68.874	ENSTGUG00000002258	-	100	65.922	Taeniopygia_guttata
ENSUAMG00000002159	RPP40	98	40.268	ENSTRUG00000003755	rpp40	98	39.943	Takifugu_rubripes
ENSUAMG00000002159	RPP40	98	37.584	ENSTNIG00000003077	rpp40	98	37.677	Tetraodon_nigroviridis
ENSUAMG00000002159	RPP40	83	60.000	ENSTBEG00000014467	-	73	60.000	Tupaia_belangeri
ENSUAMG00000002159	RPP40	99	82.597	ENSTTRG00000007319	RPP40	100	82.597	Tursiops_truncatus
ENSUAMG00000002159	RPP40	100	100.000	ENSUMAG00000018639	RPP40	94	100.000	Ursus_maritimus
ENSUAMG00000002159	RPP40	78	69.198	ENSVPAG00000004652	-	99	65.986	Vicugna_pacos
ENSUAMG00000002159	RPP40	100	94.490	ENSVVUG00000005451	RPP40	100	94.490	Vulpes_vulpes
ENSUAMG00000002159	RPP40	99	61.538	ENSXETG00000017617	rpp40	100	53.699	Xenopus_tropicalis
ENSUAMG00000002159	RPP40	54	50.617	ENSXCOG00000019991	-	87	31.232	Xiphophorus_couchianus
ENSUAMG00000002159	RPP40	98	31.339	ENSXMAG00000024940	rpp40	98	31.054	Xiphophorus_maculatus