EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000002401 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H6
Alias: FLJ41410|FLJ45877|KIAA2035|ZC3HDC6
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 28024 bases
Position: chrLZNR01003421.1:25046-53069
Accession: 24762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000002635	zf-CCCH	PF00642.24	6.9e-12	1	2
ENSUAMP00000002635	zf-CCCH	PF00642.24	6.9e-12	2	2
ENSUAMP00000002635	zf-CCCH_2	PF14608.6	1.4e-05	1	2
ENSUAMP00000002635	zf-CCCH_2	PF14608.6	1.4e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000003001	ZC3H6-201	3616	-	ENSUAMP00000002635	1049 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000002401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000002401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000002401	ZC3H6	100	85.171	ENSG00000188177	ZC3H6	90	86.623	Homo_sapiens
ENSUAMG00000002401	ZC3H6	100	98.381	ENSAMEG00000016194	ZC3H6	90	98.381	Ailuropoda_melanoleuca
ENSUAMG00000002401	ZC3H6	74	68.912	ENSACIG00000021843	zc3h6	71	62.821	Amphilophus_citrinellus
ENSUAMG00000002401	ZC3H6	89	41.717	ENSATEG00000019063	zc3h6	86	41.070	Anabas_testudineus
ENSUAMG00000002401	ZC3H6	100	65.431	ENSAPLG00000014287	ZC3H6	90	65.802	Anas_platyrhynchos
ENSUAMG00000002401	ZC3H6	100	85.741	ENSANAG00000024229	ZC3H6	90	87.196	Aotus_nancymaae
ENSUAMG00000002401	ZC3H6	69	66.827	ENSACLG00000026343	zc3h6	73	56.013	Astatotilapia_calliptera
ENSUAMG00000002401	ZC3H6	100	85.741	ENSCJAG00000016479	ZC3H6	90	87.196	Callithrix_jacchus
ENSUAMG00000002401	ZC3H6	100	93.804	ENSCAFG00000007160	ZC3H6	90	94.381	Canis_familiaris
ENSUAMG00000002401	ZC3H6	100	92.755	ENSCAFG00020017525	ZC3H6	90	93.333	Canis_lupus_dingo
ENSUAMG00000002401	ZC3H6	89	82.359	ENSCHIG00000019719	-	95	83.047	Capra_hircus
ENSUAMG00000002401	ZC3H6	100	85.688	ENSTSYG00000031857	ZC3H6	90	87.242	Carlito_syrichta
ENSUAMG00000002401	ZC3H6	100	76.239	ENSCPOG00000003445	ZC3H6	90	77.362	Cavia_porcellus
ENSUAMG00000002401	ZC3H6	100	85.635	ENSCATG00000036595	ZC3H6	100	87.091	Cercocebus_atys
ENSUAMG00000002401	ZC3H6	100	80.908	ENSCLAG00000006605	ZC3H6	100	82.320	Chinchilla_lanigera
ENSUAMG00000002401	ZC3H6	100	85.635	ENSCSAG00000016793	ZC3H6	100	87.091	Chlorocebus_sabaeus
ENSUAMG00000002401	ZC3H6	100	85.542	ENSCANG00000041036	ZC3H6	91	86.997	Colobus_angolensis_palliatus
ENSUAMG00000002401	ZC3H6	100	73.271	ENSCGRG00001022022	Zc3h6	91	73.925	Cricetulus_griseus_chok1gshd
ENSUAMG00000002401	ZC3H6	100	73.901	ENSCGRG00000016162	Zc3h6	91	74.556	Cricetulus_griseus_crigri
ENSUAMG00000002401	ZC3H6	77	55.439	ENSCSEG00000012267	zc3h6	82	60.784	Cynoglossus_semilaevis
ENSUAMG00000002401	ZC3H6	100	77.936	ENSDNOG00000044811	ZC3H6	90	78.314	Dasypus_novemcinctus
ENSUAMG00000002401	ZC3H6	100	80.168	ENSDORG00000013967	Zc3h6	91	79.607	Dipodomys_ordii
ENSUAMG00000002401	ZC3H6	93	89.013	ENSEASG00005006493	ZC3H6	99	88.403	Equus_asinus_asinus
ENSUAMG00000002401	ZC3H6	100	88.910	ENSECAG00000023620	ZC3H6	90	88.346	Equus_caballus
ENSUAMG00000002401	ZC3H6	81	76.822	ENSEEUG00000013883	-	75	77.570	Erinaceus_europaeus
ENSUAMG00000002401	ZC3H6	100	93.429	ENSFCAG00000008089	ZC3H6	90	93.429	Felis_catus
ENSUAMG00000002401	ZC3H6	100	64.405	ENSFALG00000011589	ZC3H6	90	64.684	Ficedula_albicollis
ENSUAMG00000002401	ZC3H6	100	82.039	ENSFDAG00000002521	ZC3H6	90	82.320	Fukomys_damarensis
ENSUAMG00000002401	ZC3H6	100	64.212	ENSGALG00000008269	ZC3H6	88	64.492	Gallus_gallus
ENSUAMG00000002401	ZC3H6	88	41.379	ENSGAFG00000006771	zc3h6	86	39.644	Gambusia_affinis
ENSUAMG00000002401	ZC3H6	56	38.852	ENSGACG00000005343	zc3h6	89	39.369	Gasterosteus_aculeatus
ENSUAMG00000002401	ZC3H6	100	68.123	ENSGAGG00000010857	ZC3H6	91	68.216	Gopherus_agassizii
ENSUAMG00000002401	ZC3H6	100	85.635	ENSGGOG00000001665	ZC3H6	91	86.342	Gorilla_gorilla
ENSUAMG00000002401	ZC3H6	69	66.827	ENSHBUG00000010088	zc3h6	73	56.013	Haplochromis_burtoni
ENSUAMG00000002401	ZC3H6	100	80.798	ENSHGLG00000011882	ZC3H6	87	82.584	Heterocephalus_glaber_female
ENSUAMG00000002401	ZC3H6	100	78.108	ENSHGLG00100002559	ZC3H6	90	79.869	Heterocephalus_glaber_male
ENSUAMG00000002401	ZC3H6	88	41.232	ENSHCOG00000012519	zc3h6	78	52.308	Hippocampus_comes
ENSUAMG00000002401	ZC3H6	100	82.126	ENSSTOG00000008120	-	100	81.844	Ictidomys_tridecemlineatus
ENSUAMG00000002401	ZC3H6	99	79.906	ENSJJAG00000013206	Zc3h6	90	79.906	Jaculus_jaculus
ENSUAMG00000002401	ZC3H6	88	41.556	ENSKMAG00000016252	zc3h6	75	53.153	Kryptolebias_marmoratus
ENSUAMG00000002401	ZC3H6	65	66.839	ENSLBEG00000003054	zc3h6	91	41.463	Labrus_bergylta
ENSUAMG00000002401	ZC3H6	97	51.718	ENSLACG00000012014	ZC3H6	89	52.011	Latimeria_chalumnae
ENSUAMG00000002401	ZC3H6	99	46.918	ENSLOCG00000016548	zc3h6	88	47.702	Lepisosteus_oculatus
ENSUAMG00000002401	ZC3H6	100	80.433	ENSLAFG00000001151	ZC3H6	96	79.962	Loxodonta_africana
ENSUAMG00000002401	ZC3H6	100	85.449	ENSMFAG00000036963	ZC3H6	90	86.904	Macaca_fascicularis
ENSUAMG00000002401	ZC3H6	100	85.542	ENSMMUG00000016430	ZC3H6	90	86.997	Macaca_mulatta
ENSUAMG00000002401	ZC3H6	100	85.357	ENSMNEG00000031225	ZC3H6	100	86.810	Macaca_nemestrina
ENSUAMG00000002401	ZC3H6	100	85.728	ENSMLEG00000038821	ZC3H6	90	87.184	Mandrillus_leucophaeus
ENSUAMG00000002401	ZC3H6	69	66.827	ENSMZEG00005006828	zc3h6	73	56.013	Maylandia_zebra
ENSUAMG00000002401	ZC3H6	100	64.399	ENSMGAG00000003025	ZC3H6	90	64.678	Meleagris_gallopavo
ENSUAMG00000002401	ZC3H6	100	73.901	ENSMAUG00000017009	Zc3h6	90	74.556	Mesocricetus_auratus
ENSUAMG00000002401	ZC3H6	100	86.006	ENSMICG00000036353	ZC3H6	90	87.371	Microcebus_murinus
ENSUAMG00000002401	ZC3H6	100	72.778	ENSMOCG00000002054	Zc3h6	90	73.527	Microtus_ochrogaster
ENSUAMG00000002401	ZC3H6	100	69.638	ENSMODG00000006612	ZC3H6	91	69.916	Monodelphis_domestica
ENSUAMG00000002401	ZC3H6	75	55.914	ENSMALG00000002048	zc3h6	78	60.081	Monopterus_albus
ENSUAMG00000002401	ZC3H6	100	70.935	MGP_CAROLIEiJ_G0024278	Zc3h6	90	71.709	Mus_caroli
ENSUAMG00000002401	ZC3H6	100	71.615	ENSMUSG00000042851	Zc3h6	90	72.269	Mus_musculus
ENSUAMG00000002401	ZC3H6	99	71.776	MGP_PahariEiJ_G0025723	Zc3h6	90	71.682	Mus_pahari
ENSUAMG00000002401	ZC3H6	100	71.709	MGP_SPRETEiJ_G0025198	Zc3h6	90	72.362	Mus_spretus
ENSUAMG00000002401	ZC3H6	100	95.333	ENSMPUG00000009624	ZC3H6	100	95.333	Mustela_putorius_furo
ENSUAMG00000002401	ZC3H6	100	80.355	ENSMLUG00000004896	ZC3H6	90	81.038	Myotis_lucifugus
ENSUAMG00000002401	ZC3H6	100	78.281	ENSNGAG00000013596	Zc3h6	95	78.019	Nannospalax_galili
ENSUAMG00000002401	ZC3H6	66	66.667	ENSNBRG00000015382	zc3h6	70	62.241	Neolamprologus_brichardi
ENSUAMG00000002401	ZC3H6	100	84.615	ENSNLEG00000033657	ZC3H6	90	86.062	Nomascus_leucogenys
ENSUAMG00000002401	ZC3H6	100	77.736	ENSOPRG00000012717	ZC3H6	90	77.736	Ochotona_princeps
ENSUAMG00000002401	ZC3H6	100	78.664	ENSODEG00000009099	ZC3H6	95	80.056	Octodon_degus
ENSUAMG00000002401	ZC3H6	70	65.877	ENSONIG00000009880	zc3h6	72	55.696	Oreochromis_niloticus
ENSUAMG00000002401	ZC3H6	100	70.301	ENSOANG00000012054	-	92	70.605	Ornithorhynchus_anatinus
ENSUAMG00000002401	ZC3H6	100	83.271	ENSOCUG00000011125	ZC3H6	100	83.271	Oryctolagus_cuniculus
ENSUAMG00000002401	ZC3H6	88	42.331	ENSORLG00000011179	zc3h6	87	41.568	Oryzias_latipes
ENSUAMG00000002401	ZC3H6	88	42.536	ENSORLG00020017202	zc3h6	87	41.477	Oryzias_latipes_hni
ENSUAMG00000002401	ZC3H6	88	42.288	ENSORLG00015001664	zc3h6	87	41.235	Oryzias_latipes_hsok
ENSUAMG00000002401	ZC3H6	88	41.820	ENSOMEG00000001296	zc3h6	75	55.452	Oryzias_melastigma
ENSUAMG00000002401	ZC3H6	100	83.817	ENSOGAG00000002556	ZC3H6	91	83.817	Otolemur_garnettii
ENSUAMG00000002401	ZC3H6	100	85.185	ENSOARG00000014503	ZC3H6	90	85.185	Ovis_aries
ENSUAMG00000002401	ZC3H6	100	85.264	ENSPPAG00000030495	ZC3H6	91	86.717	Pan_paniscus
ENSUAMG00000002401	ZC3H6	100	93.905	ENSPPRG00000005673	ZC3H6	90	93.905	Panthera_pardus
ENSUAMG00000002401	ZC3H6	100	92.762	ENSPTIG00000015800	ZC3H6	90	92.762	Panthera_tigris_altaica
ENSUAMG00000002401	ZC3H6	100	85.357	ENSPTRG00000012363	ZC3H6	90	86.810	Pan_troglodytes
ENSUAMG00000002401	ZC3H6	100	85.542	ENSPANG00000025224	ZC3H6	90	86.997	Papio_anubis
ENSUAMG00000002401	ZC3H6	69	69.792	ENSPKIG00000007353	zc3h6	90	51.274	Paramormyrops_kingsleyae
ENSUAMG00000002401	ZC3H6	100	68.030	ENSPSIG00000002520	ZC3H6	91	68.030	Pelodiscus_sinensis
ENSUAMG00000002401	ZC3H6	100	72.727	ENSPEMG00000000918	Zc3h6	91	73.006	Peromyscus_maniculatus_bairdii
ENSUAMG00000002401	ZC3H6	100	72.456	ENSPCIG00000029741	ZC3H6	100	72.642	Phascolarctos_cinereus
ENSUAMG00000002401	ZC3H6	88	41.922	ENSPFOG00000015748	zc3h6	87	40.216	Poecilia_formosa
ENSUAMG00000002401	ZC3H6	88	41.718	ENSPLAG00000002469	zc3h6	87	40.379	Poecilia_latipinna
ENSUAMG00000002401	ZC3H6	88	41.932	ENSPMEG00000020802	zc3h6	99	39.918	Poecilia_mexicana
ENSUAMG00000002401	ZC3H6	74	64.563	ENSPREG00000023126	zc3h6	82	58.301	Poecilia_reticulata
ENSUAMG00000002401	ZC3H6	84	76.143	ENSPCAG00000015468	ZC3H6	75	77.565	Procavia_capensis
ENSUAMG00000002401	ZC3H6	100	86.810	ENSPCOG00000016627	ZC3H6	90	86.810	Propithecus_coquereli
ENSUAMG00000002401	ZC3H6	68	74.579	ENSPVAG00000013728	ZC3H6	61	74.579	Pteropus_vampyrus
ENSUAMG00000002401	ZC3H6	69	66.176	ENSPNYG00000018130	zc3h6	73	61.826	Pundamilia_nyererei
ENSUAMG00000002401	ZC3H6	88	44.639	ENSPNAG00000009331	zc3h6	85	43.268	Pygocentrus_nattereri
ENSUAMG00000002401	ZC3H6	99	72.804	ENSRNOG00000026277	Zc3h6	90	72.710	Rattus_norvegicus
ENSUAMG00000002401	ZC3H6	100	86.019	ENSSBOG00000033489	ZC3H6	100	87.477	Saimiri_boliviensis_boliviensis
ENSUAMG00000002401	ZC3H6	93	70.955	ENSSHAG00000016634	ZC3H6	100	70.955	Sarcophilus_harrisii
ENSUAMG00000002401	ZC3H6	99	42.950	ENSSFOG00015004488	zc3h6	88	43.837	Scleropages_formosus
ENSUAMG00000002401	ZC3H6	68	69.792	ENSSDUG00000006105	zc3h6	72	55.108	Seriola_dumerili
ENSUAMG00000002401	ZC3H6	68	69.792	ENSSLDG00000021813	zc3h6	72	55.108	Seriola_lalandi_dorsalis
ENSUAMG00000002401	ZC3H6	100	81.579	ENSSARG00000001035	ZC3H6	91	81.579	Sorex_araneus
ENSUAMG00000002401	ZC3H6	62	58.140	ENSSPUG00000013031	-	70	37.978	Sphenodon_punctatus
ENSUAMG00000002401	ZC3H6	100	86.573	ENSSSCG00000008096	ZC3H6	90	86.667	Sus_scrofa
ENSUAMG00000002401	ZC3H6	100	64.558	ENSTGUG00000007468	ZC3H6	90	64.837	Taeniopygia_guttata
ENSUAMG00000002401	ZC3H6	80	53.481	ENSTRUG00000012901	zc3h6	73	53.943	Takifugu_rubripes
ENSUAMG00000002401	ZC3H6	99	40.167	ENSTNIG00000016608	zc3h6	83	52.941	Tetraodon_nigroviridis
ENSUAMG00000002401	ZC3H6	92	87.603	ENSTBEG00000016232	ZC3H6	88	87.603	Tupaia_belangeri
ENSUAMG00000002401	ZC3H6	76	88.280	ENSTTRG00000013154	ZC3H6	68	91.522	Tursiops_truncatus
ENSUAMG00000002401	ZC3H6	100	99.619	ENSUMAG00000008663	ZC3H6	100	99.619	Ursus_maritimus
ENSUAMG00000002401	ZC3H6	100	86.428	ENSVPAG00000005912	ZC3H6	91	86.522	Vicugna_pacos
ENSUAMG00000002401	ZC3H6	100	94.571	ENSVVUG00000028662	ZC3H6	100	94.571	Vulpes_vulpes
ENSUAMG00000002401	ZC3H6	82	58.175	ENSXETG00000013762	zc3h6	79	63.636	Xenopus_tropicalis
ENSUAMG00000002401	ZC3H6	62	64.563	ENSXCOG00000011662	zc3h6	80	54.545	Xiphophorus_couchianus