EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000002527 (Gene tree)
Gene ID: -
Gene Symbol: THOC1
Alias: HPR1|P84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 55408 bases
Position: chrLZNR01000894.1:535799-591206
Accession: 19070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004960	efThoc1	PF11957.8	8.1e-147	1	1
ENSUAMP00000005366	efThoc1	PF11957.8	8.4e-147	1	1
ENSUAMP00000005307	efThoc1	PF11957.8	9.3e-147	1	1
ENSUAMP00000005305	efThoc1	PF11957.8	4.9e-129	1	2
ENSUAMP00000005305	efThoc1	PF11957.8	4.9e-129	2	2
ENSUAMP00000005364	efThoc1	PF11957.8	6e-123	1	2
ENSUAMP00000005364	efThoc1	PF11957.8	6e-123	2	2
ENSUAMP00000005302	efThoc1	PF11957.8	3.5e-122	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000006093	THOC1-205	1863	-	ENSUAMP00000005364	620 (aa)	-	-
ENSUAMT00000006095	THOC1-206	1953	-	ENSUAMP00000005366	650 (aa)	-	-
ENSUAMT00000005645	THOC1-201	1929	-	ENSUAMP00000004960	642 (aa)	-	-
ENSUAMT00000006024	THOC1-203	2307	-	ENSUAMP00000005305	768 (aa)	-	-
ENSUAMT00000006026	THOC1-204	1974	-	ENSUAMP00000005307	657 (aa)	-	UPI0004E0164B
ENSUAMT00000006021	THOC1-202	2379	-	ENSUAMP00000005302	792 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000002527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000002527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000002527	THOC1	100	98.478	ENSG00000079134	THOC1	100	98.478	Homo_sapiens
ENSUAMG00000002527	THOC1	100	99.848	ENSAMEG00000006645	THOC1	99	99.848	Ailuropoda_melanoleuca
ENSUAMG00000002527	THOC1	98	69.401	ENSACIG00000019392	thoc1	99	69.337	Amphilophus_citrinellus
ENSUAMG00000002527	THOC1	98	70.173	ENSAOCG00000008391	thoc1	99	70.080	Amphiprion_ocellaris
ENSUAMG00000002527	THOC1	98	73.466	ENSAPEG00000001093	thoc1	99	73.466	Amphiprion_percula
ENSUAMG00000002527	THOC1	98	73.511	ENSATEG00000004783	thoc1	99	73.118	Anabas_testudineus
ENSUAMG00000002527	THOC1	99	90.000	ENSAPLG00000016149	THOC1	98	89.660	Anas_platyrhynchos
ENSUAMG00000002527	THOC1	100	88.485	ENSACAG00000008307	THOC1	98	87.102	Anolis_carolinensis
ENSUAMG00000002527	THOC1	100	97.440	ENSANAG00000033200	THOC1	100	97.440	Aotus_nancymaae
ENSUAMG00000002527	THOC1	98	73.006	ENSACLG00000016836	thoc1	99	73.006	Astatotilapia_calliptera
ENSUAMG00000002527	THOC1	94	71.659	ENSAMXG00000014708	thoc1	97	71.659	Astyanax_mexicanus
ENSUAMG00000002527	THOC1	100	97.717	ENSBTAG00000019215	THOC1	100	97.717	Bos_taurus
ENSUAMG00000002527	THOC1	72	35.208	WBGene00020172	thoc-1	69	36.093	Caenorhabditis_elegans
ENSUAMG00000002527	THOC1	100	98.478	ENSCJAG00000020450	THOC1	100	98.478	Callithrix_jacchus
ENSUAMG00000002527	THOC1	100	99.696	ENSCAFG00000018324	THOC1	100	99.696	Canis_familiaris
ENSUAMG00000002527	THOC1	100	99.696	ENSCAFG00020017894	THOC1	100	99.696	Canis_lupus_dingo
ENSUAMG00000002527	THOC1	100	97.717	ENSCHIG00000015399	THOC1	100	97.717	Capra_hircus
ENSUAMG00000002527	THOC1	100	98.326	ENSTSYG00000010585	THOC1	99	98.326	Carlito_syrichta
ENSUAMG00000002527	THOC1	97	74.426	ENSCAPG00000016270	THOC1	99	73.879	Cavia_aperea
ENSUAMG00000002527	THOC1	100	96.195	ENSCPOG00000000959	THOC1	100	96.195	Cavia_porcellus
ENSUAMG00000002527	THOC1	100	98.630	ENSCCAG00000025766	THOC1	100	98.630	Cebus_capucinus
ENSUAMG00000002527	THOC1	100	95.282	ENSCATG00000028180	THOC1	99	97.191	Cercocebus_atys
ENSUAMG00000002527	THOC1	99	96.395	ENSCLAG00000009117	THOC1	100	97.027	Chinchilla_lanigera
ENSUAMG00000002527	THOC1	100	98.782	ENSCSAG00000017631	THOC1	100	98.782	Chlorocebus_sabaeus
ENSUAMG00000002527	THOC1	94	86.331	ENSCHOG00000010609	THOC1	89	86.331	Choloepus_hoffmanni
ENSUAMG00000002527	THOC1	99	92.519	ENSCPBG00000027558	THOC1	99	92.519	Chrysemys_picta_bellii
ENSUAMG00000002527	THOC1	74	48.207	ENSCING00000007663	-	99	48.583	Ciona_intestinalis
ENSUAMG00000002527	THOC1	94	47.452	ENSCSAVG00000010649	-	99	46.656	Ciona_savignyi
ENSUAMG00000002527	THOC1	100	98.630	ENSCANG00000034265	THOC1	100	98.630	Colobus_angolensis_palliatus
ENSUAMG00000002527	THOC1	100	96.043	ENSCGRG00001016464	Thoc1	99	96.043	Cricetulus_griseus_chok1gshd
ENSUAMG00000002527	THOC1	91	78.716	ENSCGRG00000003390	-	99	79.223	Cricetulus_griseus_crigri
ENSUAMG00000002527	THOC1	99	95.611	ENSCGRG00000010269	-	100	96.088	Cricetulus_griseus_crigri
ENSUAMG00000002527	THOC1	98	71.739	ENSCSEG00000012486	thoc1	99	73.151	Cynoglossus_semilaevis
ENSUAMG00000002527	THOC1	98	72.239	ENSCVAG00000020600	thoc1	99	72.239	Cyprinodon_variegatus
ENSUAMG00000002527	THOC1	99	74.962	ENSDARG00000088246	thoc1	99	74.962	Danio_rerio
ENSUAMG00000002527	THOC1	100	98.174	ENSDNOG00000019217	THOC1	100	98.174	Dasypus_novemcinctus
ENSUAMG00000002527	THOC1	99	91.850	ENSDORG00000008060	Thoc1	99	92.332	Dipodomys_ordii
ENSUAMG00000002527	THOC1	97	36.696	FBgn0037382	Hpr1	74	40.951	Drosophila_melanogaster
ENSUAMG00000002527	THOC1	91	75.839	ENSETEG00000004165	THOC1	100	75.839	Echinops_telfairi
ENSUAMG00000002527	THOC1	93	64.784	ENSEBUG00000005998	thoc1	98	66.279	Eptatretus_burgeri
ENSUAMG00000002527	THOC1	100	98.630	ENSEASG00005002549	THOC1	96	98.630	Equus_asinus_asinus
ENSUAMG00000002527	THOC1	100	99.087	ENSECAG00000009267	THOC1	90	99.087	Equus_caballus
ENSUAMG00000002527	THOC1	81	78.500	ENSEEUG00000012214	-	82	78.500	Erinaceus_europaeus
ENSUAMG00000002527	THOC1	99	73.529	ENSELUG00000023277	thoc1	100	72.961	Esox_lucius
ENSUAMG00000002527	THOC1	100	99.239	ENSFCAG00000022454	THOC1	87	99.239	Felis_catus
ENSUAMG00000002527	THOC1	99	90.669	ENSFALG00000006205	THOC1	99	91.135	Ficedula_albicollis
ENSUAMG00000002527	THOC1	99	96.395	ENSFDAG00000006842	THOC1	100	97.063	Fukomys_damarensis
ENSUAMG00000002527	THOC1	98	72.613	ENSFHEG00000008841	thoc1	99	71.933	Fundulus_heteroclitus
ENSUAMG00000002527	THOC1	99	72.061	ENSGMOG00000011486	thoc1	99	72.061	Gadus_morhua
ENSUAMG00000002527	THOC1	99	90.687	ENSGALG00000014915	THOC1	98	90.687	Gallus_gallus
ENSUAMG00000002527	THOC1	98	72.457	ENSGAFG00000021464	thoc1	99	72.393	Gambusia_affinis
ENSUAMG00000002527	THOC1	99	72.409	ENSGACG00000017361	thoc1	99	73.035	Gasterosteus_aculeatus
ENSUAMG00000002527	THOC1	99	92.214	ENSGAGG00000021230	-	98	92.214	Gopherus_agassizii
ENSUAMG00000002527	THOC1	100	98.478	ENSGGOG00000003013	THOC1	99	98.478	Gorilla_gorilla
ENSUAMG00000002527	THOC1	98	73.006	ENSHBUG00000009096	thoc1	99	73.006	Haplochromis_burtoni
ENSUAMG00000002527	THOC1	80	89.637	ENSHGLG00000009264	-	99	89.637	Heterocephalus_glaber_female
ENSUAMG00000002527	THOC1	100	96.043	ENSHGLG00000003712	-	100	96.043	Heterocephalus_glaber_female
ENSUAMG00000002527	THOC1	100	96.347	ENSHGLG00100003570	THOC1	100	96.347	Heterocephalus_glaber_male
ENSUAMG00000002527	THOC1	78	88.083	ENSHGLG00100002225	-	99	88.083	Heterocephalus_glaber_male
ENSUAMG00000002527	THOC1	89	74.383	ENSIPUG00000005306	thoc1	99	74.194	Ictalurus_punctatus
ENSUAMG00000002527	THOC1	100	98.326	ENSSTOG00000006484	THOC1	100	98.326	Ictidomys_tridecemlineatus
ENSUAMG00000002527	THOC1	52	95.000	ENSJJAG00000014893	-	96	95.000	Jaculus_jaculus
ENSUAMG00000002527	THOC1	99	72.784	ENSKMAG00000003904	thoc1	99	72.146	Kryptolebias_marmoratus
ENSUAMG00000002527	THOC1	99	73.282	ENSLBEG00000020372	thoc1	98	73.282	Labrus_bergylta
ENSUAMG00000002527	THOC1	99	80.249	ENSLACG00000014869	THOC1	99	79.237	Latimeria_chalumnae
ENSUAMG00000002527	THOC1	98	77.969	ENSLOCG00000002097	thoc1	99	76.840	Lepisosteus_oculatus
ENSUAMG00000002527	THOC1	100	98.021	ENSLAFG00000009585	THOC1	100	98.021	Loxodonta_africana
ENSUAMG00000002527	THOC1	100	98.782	ENSMFAG00000041520	THOC1	99	98.782	Macaca_fascicularis
ENSUAMG00000002527	THOC1	100	98.782	ENSMMUG00000004662	THOC1	100	98.782	Macaca_mulatta
ENSUAMG00000002527	THOC1	100	98.782	ENSMNEG00000040177	THOC1	99	98.782	Macaca_nemestrina
ENSUAMG00000002527	THOC1	100	98.782	ENSMLEG00000034201	THOC1	99	98.782	Mandrillus_leucophaeus
ENSUAMG00000002527	THOC1	96	73.473	ENSMAMG00000016747	thoc1	99	73.794	Mastacembelus_armatus
ENSUAMG00000002527	THOC1	98	73.006	ENSMZEG00005024609	thoc1	99	73.006	Maylandia_zebra
ENSUAMG00000002527	THOC1	99	90.187	ENSMGAG00000009811	THOC1	100	90.498	Meleagris_gallopavo
ENSUAMG00000002527	THOC1	100	96.043	ENSMAUG00000010272	Thoc1	99	96.043	Mesocricetus_auratus
ENSUAMG00000002527	THOC1	100	98.782	ENSMICG00000027200	THOC1	100	98.782	Microcebus_murinus
ENSUAMG00000002527	THOC1	99	95.122	ENSMOCG00000014536	-	86	95.122	Microtus_ochrogaster
ENSUAMG00000002527	THOC1	99	83.511	ENSMOCG00000014924	-	96	83.511	Microtus_ochrogaster
ENSUAMG00000002527	THOC1	94	72.712	ENSMMOG00000011772	thoc1	100	73.203	Mola_mola
ENSUAMG00000002527	THOC1	100	94.286	ENSMODG00000021482	THOC1	100	94.286	Monodelphis_domestica
ENSUAMG00000002527	THOC1	98	73.824	ENSMALG00000021872	thoc1	99	73.425	Monopterus_albus
ENSUAMG00000002527	THOC1	100	96.499	MGP_CAROLIEiJ_G0021989	Thoc1	100	96.499	Mus_caroli
ENSUAMG00000002527	THOC1	100	96.651	ENSMUSG00000024287	Thoc1	100	97.872	Mus_musculus
ENSUAMG00000002527	THOC1	100	96.651	MGP_PahariEiJ_G0018726	Thoc1	100	96.651	Mus_pahari
ENSUAMG00000002527	THOC1	100	96.651	MGP_SPRETEiJ_G0022905	Thoc1	100	96.651	Mus_spretus
ENSUAMG00000002527	THOC1	100	99.696	ENSMPUG00000005448	THOC1	100	99.696	Mustela_putorius_furo
ENSUAMG00000002527	THOC1	100	97.720	ENSMLUG00000004090	-	100	97.720	Myotis_lucifugus
ENSUAMG00000002527	THOC1	90	84.992	ENSMLUG00000027965	-	99	84.823	Myotis_lucifugus
ENSUAMG00000002527	THOC1	60	84.887	ENSMLUG00000024912	-	100	84.887	Myotis_lucifugus
ENSUAMG00000002527	THOC1	99	75.535	ENSNGAG00000008061	-	99	76.198	Nannospalax_galili
ENSUAMG00000002527	THOC1	100	97.717	ENSNGAG00000001401	-	100	97.717	Nannospalax_galili
ENSUAMG00000002527	THOC1	98	72.397	ENSNBRG00000005991	thoc1	98	73.083	Neolamprologus_brichardi
ENSUAMG00000002527	THOC1	100	98.782	ENSNLEG00000006835	THOC1	100	98.782	Nomascus_leucogenys
ENSUAMG00000002527	THOC1	99	81.690	ENSMEUG00000009756	THOC1	99	82.160	Notamacropus_eugenii
ENSUAMG00000002527	THOC1	100	78.691	ENSOPRG00000001108	THOC1	100	78.691	Ochotona_princeps
ENSUAMG00000002527	THOC1	100	90.715	ENSODEG00000006623	THOC1	100	90.715	Octodon_degus
ENSUAMG00000002527	THOC1	99	72.686	ENSONIG00000009440	thoc1	99	72.686	Oreochromis_niloticus
ENSUAMG00000002527	THOC1	100	98.630	ENSOCUG00000011601	THOC1	100	98.630	Oryctolagus_cuniculus
ENSUAMG00000002527	THOC1	98	73.083	ENSORLG00000017629	thoc1	99	72.393	Oryzias_latipes
ENSUAMG00000002527	THOC1	98	73.083	ENSORLG00020007567	thoc1	99	72.393	Oryzias_latipes_hni
ENSUAMG00000002527	THOC1	98	73.239	ENSORLG00015007356	thoc1	99	72.546	Oryzias_latipes_hsok
ENSUAMG00000002527	THOC1	98	72.057	ENSOMEG00000008200	thoc1	99	71.626	Oryzias_melastigma
ENSUAMG00000002527	THOC1	100	95.282	ENSOGAG00000000470	THOC1	99	95.282	Otolemur_garnettii
ENSUAMG00000002527	THOC1	99	96.724	ENSOARG00000009238	THOC1	99	96.037	Ovis_aries
ENSUAMG00000002527	THOC1	100	98.478	ENSPPAG00000031812	THOC1	99	98.478	Pan_paniscus
ENSUAMG00000002527	THOC1	100	98.935	ENSPPRG00000023794	THOC1	100	98.935	Panthera_pardus
ENSUAMG00000002527	THOC1	100	98.935	ENSPTIG00000007469	THOC1	100	98.935	Panthera_tigris_altaica
ENSUAMG00000002527	THOC1	100	97.590	ENSPTRG00000009816	THOC1	100	97.590	Pan_troglodytes
ENSUAMG00000002527	THOC1	100	97.731	ENSPANG00000008665	THOC1	100	97.731	Papio_anubis
ENSUAMG00000002527	THOC1	99	72.630	ENSPKIG00000005906	thoc1	99	73.394	Paramormyrops_kingsleyae
ENSUAMG00000002527	THOC1	82	93.621	ENSPSIG00000007691	THOC1	98	93.996	Pelodiscus_sinensis
ENSUAMG00000002527	THOC1	95	73.420	ENSPMGG00000008279	thoc1	95	73.906	Periophthalmus_magnuspinnatus
ENSUAMG00000002527	THOC1	100	96.499	ENSPEMG00000021789	Thoc1	100	96.499	Peromyscus_maniculatus_bairdii
ENSUAMG00000002527	THOC1	75	93.522	ENSPCIG00000026942	THOC1	98	94.130	Phascolarctos_cinereus
ENSUAMG00000002527	THOC1	98	72.727	ENSPFOG00000011673	thoc1	99	72.657	Poecilia_formosa
ENSUAMG00000002527	THOC1	98	72.613	ENSPLAG00000019648	thoc1	99	72.546	Poecilia_latipinna
ENSUAMG00000002527	THOC1	98	72.727	ENSPMEG00000007083	thoc1	99	72.657	Poecilia_mexicana
ENSUAMG00000002527	THOC1	98	72.457	ENSPREG00000006719	thoc1	99	72.393	Poecilia_reticulata
ENSUAMG00000002527	THOC1	74	98.768	ENSPPYG00000009049	-	99	98.768	Pongo_abelii
ENSUAMG00000002527	THOC1	100	88.280	ENSPCAG00000005320	THOC1	100	88.280	Procavia_capensis
ENSUAMG00000002527	THOC1	100	98.478	ENSPCOG00000009234	THOC1	100	98.478	Propithecus_coquereli
ENSUAMG00000002527	THOC1	100	96.499	ENSPVAG00000004007	THOC1	100	96.499	Pteropus_vampyrus
ENSUAMG00000002527	THOC1	98	73.006	ENSPNYG00000019152	thoc1	99	73.006	Pundamilia_nyererei
ENSUAMG00000002527	THOC1	98	75.039	ENSPNAG00000023390	thoc1	99	74.615	Pygocentrus_nattereri
ENSUAMG00000002527	THOC1	91	85.547	ENSRNOG00000015332	Thoc1	100	85.547	Rattus_norvegicus
ENSUAMG00000002527	THOC1	100	97.741	ENSRBIG00000033738	THOC1	99	98.957	Rhinopithecus_bieti
ENSUAMG00000002527	THOC1	100	98.782	ENSRROG00000044988	THOC1	100	98.782	Rhinopithecus_roxellana
ENSUAMG00000002527	THOC1	100	98.478	ENSSBOG00000016556	THOC1	99	98.478	Saimiri_boliviensis_boliviensis
ENSUAMG00000002527	THOC1	100	95.137	ENSSHAG00000014829	THOC1	100	95.137	Sarcophilus_harrisii
ENSUAMG00000002527	THOC1	98	75.743	ENSSFOG00015021527	thoc1	99	75.153	Scleropages_formosus
ENSUAMG00000002527	THOC1	98	70.968	ENSSMAG00000018465	thoc1	99	71.101	Scophthalmus_maximus
ENSUAMG00000002527	THOC1	98	73.824	ENSSDUG00000016810	thoc1	99	73.579	Seriola_dumerili
ENSUAMG00000002527	THOC1	98	73.511	ENSSLDG00000015555	thoc1	99	73.272	Seriola_lalandi_dorsalis
ENSUAMG00000002527	THOC1	88	97.701	ENSSARG00000006910	THOC1	88	97.701	Sorex_araneus
ENSUAMG00000002527	THOC1	99	89.671	ENSSPUG00000007238	THOC1	99	90.076	Sphenodon_punctatus
ENSUAMG00000002527	THOC1	98	70.183	ENSSPAG00000018847	thoc1	99	70.183	Stegastes_partitus
ENSUAMG00000002527	THOC1	100	98.782	ENSSSCG00000025653	THOC1	94	98.782	Sus_scrofa
ENSUAMG00000002527	THOC1	99	91.298	ENSTGUG00000010204	THOC1	99	91.298	Taeniopygia_guttata
ENSUAMG00000002527	THOC1	98	72.393	ENSTRUG00000013518	thoc1	99	72.393	Takifugu_rubripes
ENSUAMG00000002527	THOC1	98	72.393	ENSTNIG00000008473	thoc1	99	72.393	Tetraodon_nigroviridis
ENSUAMG00000002527	THOC1	100	90.563	ENSTBEG00000016920	THOC1	100	90.563	Tupaia_belangeri
ENSUAMG00000002527	THOC1	100	91.476	ENSTTRG00000016664	THOC1	100	91.476	Tursiops_truncatus
ENSUAMG00000002527	THOC1	100	100.000	ENSUMAG00000019693	THOC1	100	100.000	Ursus_maritimus
ENSUAMG00000002527	THOC1	81	97.500	ENSVPAG00000003726	-	77	97.500	Vicugna_pacos
ENSUAMG00000002527	THOC1	100	99.696	ENSVVUG00000004384	THOC1	100	99.696	Vulpes_vulpes
ENSUAMG00000002527	THOC1	99	80.495	ENSXETG00000003155	thoc1	98	79.545	Xenopus_tropicalis
ENSUAMG00000002527	THOC1	94	70.376	ENSXCOG00000016085	thoc1	90	71.357	Xiphophorus_couchianus
ENSUAMG00000002527	THOC1	98	72.457	ENSXMAG00000002353	thoc1	99	72.393	Xiphophorus_maculatus