EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000002820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 62780 bases
Position: chrLZNR01012639.1:25218-87997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000003095	SNase	PF00565.17	5.3e-24	1	2
ENSUAMP00000003095	SNase	PF00565.17	5.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000003534	-	738	-	ENSUAMP00000003099	245 (aa)	-	-
ENSUAMT00000003528	-	1233	-	ENSUAMP00000003095	410 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000002820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000002820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000002820	-	86	90.054	ENSG00000197157	SND1	71	90.130	Homo_sapiens
ENSUAMG00000002820	-	89	76.762	ENSAPOG00000017599	snd1	69	76.762	Acanthochromis_polyacanthus
ENSUAMG00000002820	-	90	90.390	ENSAMEG00000004664	SND1	67	89.922	Ailuropoda_melanoleuca
ENSUAMG00000002820	-	76	77.946	ENSACIG00000003551	snd1	67	75.645	Amphilophus_citrinellus
ENSUAMG00000002820	-	89	76.762	ENSAOCG00000014166	snd1	69	76.762	Amphiprion_ocellaris
ENSUAMG00000002820	-	89	76.762	ENSAPEG00000007067	snd1	69	76.762	Amphiprion_percula
ENSUAMG00000002820	-	89	76.501	ENSATEG00000018475	snd1	62	76.501	Anabas_testudineus
ENSUAMG00000002820	-	86	89.785	ENSANAG00000034463	SND1	71	89.870	Aotus_nancymaae
ENSUAMG00000002820	-	89	76.440	ENSACLG00000022897	snd1	69	76.440	Astatotilapia_calliptera
ENSUAMG00000002820	-	87	77.249	ENSAMXG00000016318	snd1	72	77.249	Astyanax_mexicanus
ENSUAMG00000002820	-	86	89.247	ENSBTAG00000010692	SND1	71	89.351	Bos_taurus
ENSUAMG00000002820	-	86	45.946	WBGene00006626	tsn-1	69	45.946	Caenorhabditis_elegans
ENSUAMG00000002820	-	86	89.516	ENSCJAG00000017668	SND1	71	89.610	Callithrix_jacchus
ENSUAMG00000002820	-	90	90.649	ENSCAFG00000001700	SND1	71	90.649	Canis_familiaris
ENSUAMG00000002820	-	90	90.649	ENSCAFG00020021639	SND1	71	90.649	Canis_lupus_dingo
ENSUAMG00000002820	-	87	89.600	ENSCHIG00000023390	SND1	73	89.691	Capra_hircus
ENSUAMG00000002820	-	83	88.920	ENSTSYG00000004979	SND1	89	88.920	Carlito_syrichta
ENSUAMG00000002820	-	85	79.439	ENSCAPG00000010677	SND1	70	79.439	Cavia_aperea
ENSUAMG00000002820	-	86	89.516	ENSCPOG00000006251	SND1	71	89.610	Cavia_porcellus
ENSUAMG00000002820	-	86	90.054	ENSCCAG00000036847	SND1	71	90.130	Cebus_capucinus
ENSUAMG00000002820	-	86	90.323	ENSCATG00000035214	SND1	71	90.390	Cercocebus_atys
ENSUAMG00000002820	-	86	89.247	ENSCLAG00000011796	SND1	91	88.630	Chinchilla_lanigera
ENSUAMG00000002820	-	86	90.323	ENSCSAG00000010182	SND1	71	90.390	Chlorocebus_sabaeus
ENSUAMG00000002820	-	90	82.171	ENSCPBG00000018094	SND1	67	82.732	Chrysemys_picta_bellii
ENSUAMG00000002820	-	83	53.151	ENSCING00000000524	-	66	51.697	Ciona_intestinalis
ENSUAMG00000002820	-	88	51.429	ENSCSAVG00000008807	-	66	51.429	Ciona_savignyi
ENSUAMG00000002820	-	86	90.323	ENSCANG00000035119	SND1	71	90.390	Colobus_angolensis_palliatus
ENSUAMG00000002820	-	86	88.441	ENSCGRG00001022514	Snd1	91	87.597	Cricetulus_griseus_chok1gshd
ENSUAMG00000002820	-	83	88.022	ENSCGRG00000012277	Snd1	69	88.022	Cricetulus_griseus_crigri
ENSUAMG00000002820	-	89	75.584	ENSCSEG00000008661	snd1	70	75.584	Cynoglossus_semilaevis
ENSUAMG00000002820	-	89	77.285	ENSCVAG00000010316	snd1	67	78.886	Cyprinodon_variegatus
ENSUAMG00000002820	-	89	76.623	ENSDARG00000006766	snd1	72	76.623	Danio_rerio
ENSUAMG00000002820	-	83	83.611	ENSDNOG00000006795	SND1	70	83.611	Dasypus_novemcinctus
ENSUAMG00000002820	-	86	89.785	ENSDORG00000000336	Snd1	71	89.870	Dipodomys_ordii
ENSUAMG00000002820	-	85	47.554	FBgn0035121	Tudor-SN	68	46.494	Drosophila_melanogaster
ENSUAMG00000002820	-	74	72.327	ENSETEG00000000375	SND1	51	72.327	Echinops_telfairi
ENSUAMG00000002820	-	55	71.429	ENSEBUG00000014201	-	69	74.667	Eptatretus_burgeri
ENSUAMG00000002820	-	87	89.305	ENSEASG00005008513	SND1	70	89.406	Equus_asinus_asinus
ENSUAMG00000002820	-	87	89.333	ENSECAG00000011451	SND1	69	89.870	Equus_caballus
ENSUAMG00000002820	-	90	87.532	ENSEEUG00000014737	SND1	60	87.080	Erinaceus_europaeus
ENSUAMG00000002820	-	89	74.413	ENSELUG00000001805	snd1	65	74.413	Esox_lucius
ENSUAMG00000002820	-	90	90.649	ENSFCAG00000008289	SND1	73	90.649	Felis_catus
ENSUAMG00000002820	-	86	89.459	ENSFDAG00000015881	SND1	71	89.351	Fukomys_damarensis
ENSUAMG00000002820	-	87	77.513	ENSFHEG00000004093	snd1	69	77.513	Fundulus_heteroclitus
ENSUAMG00000002820	-	89	77.546	ENSGAFG00000008421	snd1	68	79.050	Gambusia_affinis
ENSUAMG00000002820	-	87	40.470	ENSGACG00000019793	snd1	57	40.470	Gasterosteus_aculeatus
ENSUAMG00000002820	-	86	90.323	ENSGGOG00000009614	SND1	71	90.390	Gorilla_gorilla
ENSUAMG00000002820	-	88	75.926	ENSHBUG00000019135	snd1	68	76.455	Haplochromis_burtoni
ENSUAMG00000002820	-	86	88.978	ENSHGLG00000003618	SND1	90	88.372	Heterocephalus_glaber_female
ENSUAMG00000002820	-	88	87.895	ENSHGLG00100012449	SND1	70	87.895	Heterocephalus_glaber_male
ENSUAMG00000002820	-	89	75.916	ENSHCOG00000005266	snd1	70	75.916	Hippocampus_comes
ENSUAMG00000002820	-	89	75.718	ENSIPUG00000013279	snd1	70	75.718	Ictalurus_punctatus
ENSUAMG00000002820	-	86	89.516	ENSSTOG00000002140	SND1	71	89.610	Ictidomys_tridecemlineatus
ENSUAMG00000002820	-	86	89.516	ENSJJAG00000009561	Snd1	71	89.610	Jaculus_jaculus
ENSUAMG00000002820	-	89	77.285	ENSKMAG00000016997	snd1	69	77.285	Kryptolebias_marmoratus
ENSUAMG00000002820	-	89	76.240	ENSLBEG00000013563	snd1	72	76.240	Labrus_bergylta
ENSUAMG00000002820	-	86	77.067	ENSLOCG00000015537	snd1	67	75.578	Lepisosteus_oculatus
ENSUAMG00000002820	-	90	88.312	ENSLAFG00000009696	SND1	71	88.312	Loxodonta_africana
ENSUAMG00000002820	-	86	90.323	ENSMFAG00000038114	SND1	71	90.390	Macaca_fascicularis
ENSUAMG00000002820	-	86	90.323	ENSMMUG00000015432	SND1	89	89.664	Macaca_mulatta
ENSUAMG00000002820	-	86	90.323	ENSMNEG00000039808	SND1	89	89.972	Macaca_nemestrina
ENSUAMG00000002820	-	86	90.323	ENSMLEG00000029040	SND1	89	89.972	Mandrillus_leucophaeus
ENSUAMG00000002820	-	89	77.023	ENSMAMG00000011739	snd1	69	77.023	Mastacembelus_armatus
ENSUAMG00000002820	-	89	76.440	ENSMZEG00005005681	snd1	70	76.440	Maylandia_zebra
ENSUAMG00000002820	-	86	90.323	ENSMICG00000000097	SND1	71	90.390	Microcebus_murinus
ENSUAMG00000002820	-	86	88.978	ENSMOCG00000005040	Snd1	71	89.091	Microtus_ochrogaster
ENSUAMG00000002820	-	89	76.501	ENSMMOG00000001795	snd1	69	76.501	Mola_mola
ENSUAMG00000002820	-	86	84.267	ENSMODG00000015182	SND1	67	84.536	Monodelphis_domestica
ENSUAMG00000002820	-	89	76.762	ENSMALG00000012071	snd1	72	76.762	Monopterus_albus
ENSUAMG00000002820	-	86	88.378	MGP_CAROLIEiJ_G0028159	Snd1	91	87.597	Mus_caroli
ENSUAMG00000002820	-	86	87.838	ENSMUSG00000001424	Snd1	91	87.080	Mus_musculus
ENSUAMG00000002820	-	86	88.378	MGP_PahariEiJ_G0021917	Snd1	92	87.597	Mus_pahari
ENSUAMG00000002820	-	86	88.378	MGP_SPRETEiJ_G0029159	Snd1	91	87.597	Mus_spretus
ENSUAMG00000002820	-	90	89.870	ENSMPUG00000006545	SND1	71	89.870	Mustela_putorius_furo
ENSUAMG00000002820	-	83	89.136	ENSMLUG00000017130	SND1	68	89.136	Myotis_lucifugus
ENSUAMG00000002820	-	86	88.710	ENSNGAG00000011186	Snd1	71	88.831	Nannospalax_galili
ENSUAMG00000002820	-	89	76.440	ENSNBRG00000006681	snd1	69	76.440	Neolamprologus_brichardi
ENSUAMG00000002820	-	90	90.130	ENSNLEG00000012263	SND1	91	89.406	Nomascus_leucogenys
ENSUAMG00000002820	-	86	90.054	ENSODEG00000011502	SND1	71	90.130	Octodon_degus
ENSUAMG00000002820	-	89	76.440	ENSONIG00000011481	snd1	67	76.440	Oreochromis_niloticus
ENSUAMG00000002820	-	84	83.014	ENSOANG00000000817	SND1	70	80.779	Ornithorhynchus_anatinus
ENSUAMG00000002820	-	90	88.312	ENSOCUG00000001620	SND1	71	88.312	Oryctolagus_cuniculus
ENSUAMG00000002820	-	84	79.726	ENSORLG00000015201	snd1	70	77.285	Oryzias_latipes
ENSUAMG00000002820	-	84	79.726	ENSORLG00020013991	snd1	70	77.285	Oryzias_latipes_hni
ENSUAMG00000002820	-	84	79.726	ENSORLG00015012436	snd1	69	77.285	Oryzias_latipes_hsok
ENSUAMG00000002820	-	89	76.240	ENSOMEG00000006406	snd1	68	76.240	Oryzias_melastigma
ENSUAMG00000002820	-	86	89.572	ENSOGAG00000013356	SND1	67	89.406	Otolemur_garnettii
ENSUAMG00000002820	-	83	89.722	ENSOARG00000002149	SND1	70	89.722	Ovis_aries
ENSUAMG00000002820	-	86	90.323	ENSPPAG00000042947	SND1	71	90.390	Pan_paniscus
ENSUAMG00000002820	-	90	90.649	ENSPPRG00000004494	SND1	71	90.649	Panthera_pardus
ENSUAMG00000002820	-	90	90.649	ENSPTIG00000014214	SND1	71	90.649	Panthera_tigris_altaica
ENSUAMG00000002820	-	86	90.323	ENSPTRG00000023911	SND1	71	90.390	Pan_troglodytes
ENSUAMG00000002820	-	86	90.323	ENSPANG00000011997	SND1	73	90.390	Papio_anubis
ENSUAMG00000002820	-	87	76.738	ENSPKIG00000023494	snd1	67	75.130	Paramormyrops_kingsleyae
ENSUAMG00000002820	-	79	75.588	ENSPMGG00000003629	snd1	70	75.588	Periophthalmus_magnuspinnatus
ENSUAMG00000002820	-	86	88.978	ENSPEMG00000010240	Snd1	71	89.091	Peromyscus_maniculatus_bairdii
ENSUAMG00000002820	-	82	69.944	ENSPMAG00000007915	-	66	69.944	Petromyzon_marinus
ENSUAMG00000002820	-	87	84.656	ENSPCIG00000011561	SND1	75	84.910	Phascolarctos_cinereus
ENSUAMG00000002820	-	89	77.023	ENSPFOG00000001557	snd1	67	77.023	Poecilia_formosa
ENSUAMG00000002820	-	89	77.285	ENSPLAG00000018459	snd1	65	77.285	Poecilia_latipinna
ENSUAMG00000002820	-	89	77.807	ENSPMEG00000006803	snd1	67	77.807	Poecilia_mexicana
ENSUAMG00000002820	-	89	77.807	ENSPREG00000002189	snd1	68	77.807	Poecilia_reticulata
ENSUAMG00000002820	-	86	90.323	ENSPPYG00000017972	SND1	78	90.390	Pongo_abelii
ENSUAMG00000002820	-	80	86.455	ENSPCAG00000011305	SND1	53	86.455	Procavia_capensis
ENSUAMG00000002820	-	86	90.323	ENSPCOG00000026791	SND1	88	85.677	Propithecus_coquereli
ENSUAMG00000002820	-	86	88.978	ENSPVAG00000013945	SND1	70	89.091	Pteropus_vampyrus
ENSUAMG00000002820	-	89	76.440	ENSPNYG00000000932	snd1	69	76.440	Pundamilia_nyererei
ENSUAMG00000002820	-	89	75.718	ENSPNAG00000001206	snd1	69	75.718	Pygocentrus_nattereri
ENSUAMG00000002820	-	86	88.378	ENSRNOG00000031173	Snd1	70	87.990	Rattus_norvegicus
ENSUAMG00000002820	-	83	89.722	ENSRBIG00000027782	-	62	89.831	Rhinopithecus_bieti
ENSUAMG00000002820	-	86	90.323	ENSRROG00000033020	SND1	71	90.390	Rhinopithecus_roxellana
ENSUAMG00000002820	-	86	90.054	ENSSBOG00000032461	SND1	87	84.974	Saimiri_boliviensis_boliviensis
ENSUAMG00000002820	-	84	83.880	ENSSHAG00000015359	SND1	70	83.880	Sarcophilus_harrisii
ENSUAMG00000002820	-	90	74.485	ENSSFOG00015001103	snd1	68	74.485	Scleropages_formosus
ENSUAMG00000002820	-	84	76.712	ENSSMAG00000001932	snd1	65	74.413	Scophthalmus_maximus
ENSUAMG00000002820	-	89	76.501	ENSSDUG00000002699	snd1	64	76.501	Seriola_dumerili
ENSUAMG00000002820	-	89	69.974	ENSSLDG00000001950	snd1	67	69.974	Seriola_lalandi_dorsalis
ENSUAMG00000002820	-	83	88.022	ENSSARG00000004877	SND1	61	88.022	Sorex_araneus
ENSUAMG00000002820	-	83	81.717	ENSSPUG00000017586	SND1	60	81.717	Sphenodon_punctatus
ENSUAMG00000002820	-	89	75.521	ENSSPAG00000021398	snd1	93	75.521	Stegastes_partitus
ENSUAMG00000002820	-	86	88.978	ENSSSCG00000016590	SND1	71	89.091	Sus_scrofa
ENSUAMG00000002820	-	89	87.879	ENSTRUG00000014067	snd1	65	87.879	Takifugu_rubripes
ENSUAMG00000002820	-	89	77.285	ENSTNIG00000011019	snd1	92	77.285	Tetraodon_nigroviridis
ENSUAMG00000002820	-	83	89.415	ENSTBEG00000003999	SND1	58	89.415	Tupaia_belangeri
ENSUAMG00000002820	-	90	88.542	ENSTTRG00000006059	SND1	71	88.542	Tursiops_truncatus
ENSUAMG00000002820	-	90	90.649	ENSUMAG00000005960	SND1	71	90.649	Ursus_maritimus
ENSUAMG00000002820	-	83	71.309	ENSVPAG00000008302	SND1	57	71.309	Vicugna_pacos
ENSUAMG00000002820	-	90	90.390	ENSVVUG00000007226	SND1	71	90.390	Vulpes_vulpes
ENSUAMG00000002820	-	83	80.223	ENSXETG00000023043	snd1	68	80.223	Xenopus_tropicalis
ENSUAMG00000002820	-	78	78.235	ENSXCOG00000013629	snd1	70	78.235	Xiphophorus_couchianus
ENSUAMG00000002820	-	89	77.546	ENSXMAG00000011469	snd1	69	77.546	Xiphophorus_maculatus