EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000003345 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 27069 bases
Position: chrLZNR01008701.1:109805-136873
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000003633	RNA_pol_Rpb2_7	PF04560.20	1.8e-34	1	1
ENSUAMP00000003633	RNA_pol_Rpb2_6	PF00562.28	5.2e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000004143	-	1335	-	ENSUAMP00000003633	444 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000003345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000003345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000003345	-	90	42.716	ENSUAMG00000024267	POLR3B	62	42.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000003345	-	89	36.779	ENSG00000125630	POLR1B	60	34.466	Homo_sapiens
ENSUAMG00000003345	-	89	36.627	ENSACAG00000007117	-	57	36.627	Anolis_carolinensis
ENSUAMG00000003345	-	75	79.641	ENSGAFG00000016488	-	99	79.641	Gambusia_affinis
ENSUAMG00000003345	-	75	40.719	ENSHBUG00000008882	polr3b	94	40.719	Haplochromis_burtoni
ENSUAMG00000003345	-	90	97.007	ENSMICG00000015166	POLR2B	80	97.007	Microcebus_murinus
ENSUAMG00000003345	-	75	45.210	ENSOMEG00000010619	polr3b	94	45.210	Oryzias_melastigma
ENSUAMG00000003345	-	75	45.808	ENSPMGG00000013671	polr3b	94	45.808	Periophthalmus_magnuspinnatus
ENSUAMG00000003345	-	90	43.069	ENSPMAG00000008197	-	81	43.069	Petromyzon_marinus
ENSUAMG00000003345	-	83	87.805	ENSPCOG00000009281	-	81	87.805	Propithecus_coquereli
ENSUAMG00000003345	-	90	99.501	ENSRBIG00000042838	POLR2B	80	99.501	Rhinopithecus_bieti
ENSUAMG00000003345	-	90	98.753	ENSSPUG00000018295	POLR2B	80	98.753	Sphenodon_punctatus
ENSUAMG00000003345	-	75	44.745	ENSSPUG00000004905	-	94	44.745	Sphenodon_punctatus
ENSUAMG00000003345	-	90	96.750	ENSSPAG00000019229	-	80	96.750	Stegastes_partitus
ENSUAMG00000003345	-	75	46.687	ENSSPAG00000008909	polr3b	94	46.687	Stegastes_partitus
ENSUAMG00000003345	-	75	79.042	ENSXCOG00000014654	-	99	79.042	Xiphophorus_couchianus