EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000003690 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 17343 bases
Position: chrLZNR01001475.1:56630-73972
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004027	zf-U11-48K	PF05253.12	1.6e-09	1	1
ENSUAMP00000004026	zf-U11-48K	PF05253.12	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000004584	SNRNP48-201	1017	-	ENSUAMP00000004026	338 (aa)	-	-
ENSUAMT00000004585	SNRNP48-202	801	-	ENSUAMP00000004027	266 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000003690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000003690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000003690	SNRNP48	100	91.740	ENSG00000168566	SNRNP48	100	92.920	Homo_sapiens
ENSUAMG00000003690	SNRNP48	81	48.582	ENSAPOG00000021430	snrnp48	96	43.804	Acanthochromis_polyacanthus
ENSUAMG00000003690	SNRNP48	99	98.810	ENSAMEG00000017349	SNRNP48	100	96.243	Ailuropoda_melanoleuca
ENSUAMG00000003690	SNRNP48	83	46.996	ENSACIG00000002032	snrnp48	96	43.881	Amphilophus_citrinellus
ENSUAMG00000003690	SNRNP48	81	48.582	ENSAOCG00000010562	snrnp48	96	44.509	Amphiprion_ocellaris
ENSUAMG00000003690	SNRNP48	81	48.571	ENSAPEG00000003231	snrnp48	96	44.477	Amphiprion_percula
ENSUAMG00000003690	SNRNP48	77	50.185	ENSATEG00000020210	snrnp48	81	49.821	Anabas_testudineus
ENSUAMG00000003690	SNRNP48	83	63.699	ENSACAG00000002811	SNRNP48	90	63.699	Anolis_carolinensis
ENSUAMG00000003690	SNRNP48	100	90.560	ENSANAG00000033538	SNRNP48	100	91.740	Aotus_nancymaae
ENSUAMG00000003690	SNRNP48	91	46.178	ENSAMXG00000015309	snrnp48	97	44.767	Astyanax_mexicanus
ENSUAMG00000003690	SNRNP48	100	87.647	ENSBTAG00000001123	SNRNP48	100	88.235	Bos_taurus
ENSUAMG00000003690	SNRNP48	100	90.855	ENSCJAG00000021330	SNRNP48	100	92.035	Callithrix_jacchus
ENSUAMG00000003690	SNRNP48	99	95.833	ENSCAFG00000009574	SNRNP48	83	95.846	Canis_familiaris
ENSUAMG00000003690	SNRNP48	99	96.142	ENSCAFG00020013203	SNRNP48	99	96.142	Canis_lupus_dingo
ENSUAMG00000003690	SNRNP48	100	89.412	ENSCHIG00000015216	SNRNP48	100	90.000	Capra_hircus
ENSUAMG00000003690	SNRNP48	100	89.381	ENSTSYG00000000698	SNRNP48	100	89.971	Carlito_syrichta
ENSUAMG00000003690	SNRNP48	91	86.364	ENSCAPG00000006768	SNRNP48	100	86.364	Cavia_aperea
ENSUAMG00000003690	SNRNP48	100	87.906	ENSCPOG00000007910	SNRNP48	100	88.791	Cavia_porcellus
ENSUAMG00000003690	SNRNP48	100	89.381	ENSCCAG00000035652	SNRNP48	100	90.560	Cebus_capucinus
ENSUAMG00000003690	SNRNP48	100	90.855	ENSCATG00000033947	SNRNP48	100	92.035	Cercocebus_atys
ENSUAMG00000003690	SNRNP48	100	87.611	ENSCLAG00000003765	SNRNP48	100	88.496	Chinchilla_lanigera
ENSUAMG00000003690	SNRNP48	100	92.330	ENSCSAG00000007409	SNRNP48	100	92.330	Chlorocebus_sabaeus
ENSUAMG00000003690	SNRNP48	85	64.145	ENSCPBG00000019146	SNRNP48	92	64.145	Chrysemys_picta_bellii
ENSUAMG00000003690	SNRNP48	94	31.077	ENSCING00000004121	-	97	30.861	Ciona_intestinalis
ENSUAMG00000003690	SNRNP48	100	91.150	ENSCANG00000030017	SNRNP48	100	92.330	Colobus_angolensis_palliatus
ENSUAMG00000003690	SNRNP48	100	87.611	ENSCGRG00001001076	-	100	87.611	Cricetulus_griseus_chok1gshd
ENSUAMG00000003690	SNRNP48	99	68.955	ENSCGRG00001008805	-	95	68.657	Cricetulus_griseus_chok1gshd
ENSUAMG00000003690	SNRNP48	100	87.611	ENSCGRG00000007781	Snrnp48	100	87.611	Cricetulus_griseus_crigri
ENSUAMG00000003690	SNRNP48	78	47.727	ENSCSEG00000000722	snrnp48	78	46.619	Cynoglossus_semilaevis
ENSUAMG00000003690	SNRNP48	89	44.872	ENSCVAG00000019829	snrnp48	78	45.098	Cyprinodon_variegatus
ENSUAMG00000003690	SNRNP48	81	45.583	ENSDARG00000039989	snrnp48	87	46.205	Danio_rerio
ENSUAMG00000003690	SNRNP48	100	90.588	ENSDNOG00000014978	SNRNP48	100	90.588	Dasypus_novemcinctus
ENSUAMG00000003690	SNRNP48	99	87.906	ENSDORG00000015140	Snrnp48	100	87.647	Dipodomys_ordii
ENSUAMG00000003690	SNRNP48	50	41.481	ENSEBUG00000016376	-	69	39.130	Eptatretus_burgeri
ENSUAMG00000003690	SNRNP48	99	94.379	ENSEASG00005012021	SNRNP48	100	94.100	Equus_asinus_asinus
ENSUAMG00000003690	SNRNP48	100	94.985	ENSECAG00000026937	SNRNP48	100	94.985	Equus_caballus
ENSUAMG00000003690	SNRNP48	100	79.208	ENSEEUG00000015437	SNRNP48	99	66.471	Erinaceus_europaeus
ENSUAMG00000003690	SNRNP48	95	43.620	ENSELUG00000009766	snrnp48	94	43.275	Esox_lucius
ENSUAMG00000003690	SNRNP48	100	96.460	ENSFCAG00000018853	SNRNP48	100	96.460	Felis_catus
ENSUAMG00000003690	SNRNP48	84	64.384	ENSFALG00000007797	SNRNP48	93	63.946	Ficedula_albicollis
ENSUAMG00000003690	SNRNP48	99	88.462	ENSFDAG00000009231	SNRNP48	100	88.201	Fukomys_damarensis
ENSUAMG00000003690	SNRNP48	59	53.960	ENSFHEG00000014647	snrnp48	97	48.070	Fundulus_heteroclitus
ENSUAMG00000003690	SNRNP48	72	47.773	ENSGMOG00000018599	-	93	43.750	Gadus_morhua
ENSUAMG00000003690	SNRNP48	82	63.194	ENSGALG00000013005	SNRNP48	89	66.038	Gallus_gallus
ENSUAMG00000003690	SNRNP48	72	49.206	ENSGAFG00000021639	snrnp48	93	43.068	Gambusia_affinis
ENSUAMG00000003690	SNRNP48	71	50.622	ENSGACG00000017756	-	96	44.152	Gasterosteus_aculeatus
ENSUAMG00000003690	SNRNP48	84	63.907	ENSGAGG00000000865	SNRNP48	97	63.907	Gopherus_agassizii
ENSUAMG00000003690	SNRNP48	100	91.740	ENSGGOG00000013220	SNRNP48	100	92.920	Gorilla_gorilla
ENSUAMG00000003690	SNRNP48	76	47.692	ENSHBUG00000017066	snrnp48	95	42.815	Haplochromis_burtoni
ENSUAMG00000003690	SNRNP48	99	89.349	ENSHGLG00000015241	SNRNP48	100	89.086	Heterocephalus_glaber_female
ENSUAMG00000003690	SNRNP48	99	89.349	ENSHGLG00100010027	SNRNP48	100	89.086	Heterocephalus_glaber_male
ENSUAMG00000003690	SNRNP48	71	46.281	ENSHCOG00000014066	snrnp48	92	41.033	Hippocampus_comes
ENSUAMG00000003690	SNRNP48	100	92.330	ENSSTOG00000014635	SNRNP48	100	92.330	Ictidomys_tridecemlineatus
ENSUAMG00000003690	SNRNP48	100	86.136	ENSJJAG00000011495	Snrnp48	100	86.136	Jaculus_jaculus
ENSUAMG00000003690	SNRNP48	90	43.464	ENSKMAG00000016514	snrnp48	80	45.714	Kryptolebias_marmoratus
ENSUAMG00000003690	SNRNP48	76	49.225	ENSLBEG00000026249	snrnp48	95	44.838	Labrus_bergylta
ENSUAMG00000003690	SNRNP48	96	53.593	ENSLACG00000003958	SNRNP48	98	52.632	Latimeria_chalumnae
ENSUAMG00000003690	SNRNP48	83	50.347	ENSLOCG00000004187	snrnp48	95	48.214	Lepisosteus_oculatus
ENSUAMG00000003690	SNRNP48	100	86.136	ENSLAFG00000011152	SNRNP48	100	87.316	Loxodonta_africana
ENSUAMG00000003690	SNRNP48	100	91.445	ENSMFAG00000045216	SNRNP48	100	92.625	Macaca_fascicularis
ENSUAMG00000003690	SNRNP48	100	91.445	ENSMMUG00000014785	SNRNP48	100	92.625	Macaca_mulatta
ENSUAMG00000003690	SNRNP48	100	91.150	ENSMNEG00000042269	SNRNP48	100	92.330	Macaca_nemestrina
ENSUAMG00000003690	SNRNP48	100	91.445	ENSMLEG00000034004	SNRNP48	100	92.625	Mandrillus_leucophaeus
ENSUAMG00000003690	SNRNP48	76	47.104	ENSMAMG00000018673	snrnp48	83	44.478	Mastacembelus_armatus
ENSUAMG00000003690	SNRNP48	83	64.286	ENSMGAG00000006037	SNRNP48	99	63.699	Meleagris_gallopavo
ENSUAMG00000003690	SNRNP48	100	88.496	ENSMAUG00000011944	Snrnp48	100	88.496	Mesocricetus_auratus
ENSUAMG00000003690	SNRNP48	100	88.201	ENSMICG00000012497	SNRNP48	100	89.381	Microcebus_murinus
ENSUAMG00000003690	SNRNP48	100	87.906	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSUAMG00000003690	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSUAMG00000003690	SNRNP48	98	72.093	ENSMODG00000009996	SNRNP48	93	72.093	Monodelphis_domestica
ENSUAMG00000003690	SNRNP48	74	51.383	ENSMALG00000005725	snrnp48	95	46.687	Monopterus_albus
ENSUAMG00000003690	SNRNP48	100	87.906	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.021	Mus_caroli
ENSUAMG00000003690	SNRNP48	100	87.611	ENSMUSG00000021431	Snrnp48	100	86.726	Mus_musculus
ENSUAMG00000003690	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSUAMG00000003690	SNRNP48	100	87.021	MGP_SPRETEiJ_G0019321	Snrnp48	100	86.136	Mus_spretus
ENSUAMG00000003690	SNRNP48	99	86.391	ENSNGAG00000004849	Snrnp48	99	86.391	Nannospalax_galili
ENSUAMG00000003690	SNRNP48	74	47.843	ENSNBRG00000012127	snrnp48	95	42.353	Neolamprologus_brichardi
ENSUAMG00000003690	SNRNP48	100	92.035	ENSNLEG00000011667	SNRNP48	100	93.215	Nomascus_leucogenys
ENSUAMG00000003690	SNRNP48	95	78.882	ENSOPRG00000015471	SNRNP48	100	79.503	Ochotona_princeps
ENSUAMG00000003690	SNRNP48	50	74.150	ENSODEG00000005816	-	95	74.150	Octodon_degus
ENSUAMG00000003690	SNRNP48	97	43.881	ENSONIG00000001520	snrnp48	95	43.068	Oreochromis_niloticus
ENSUAMG00000003690	SNRNP48	62	59.890	ENSOANG00000019888	-	100	64.423	Ornithorhynchus_anatinus
ENSUAMG00000003690	SNRNP48	84	88.811	ENSOCUG00000005168	SNRNP48	100	89.474	Oryctolagus_cuniculus
ENSUAMG00000003690	SNRNP48	88	47.883	ENSORLG00000015654	snrnp48	96	46.647	Oryzias_latipes
ENSUAMG00000003690	SNRNP48	88	46.906	ENSORLG00020015976	snrnp48	82	46.064	Oryzias_latipes_hni
ENSUAMG00000003690	SNRNP48	88	47.557	ENSORLG00015022379	snrnp48	82	46.647	Oryzias_latipes_hsok
ENSUAMG00000003690	SNRNP48	83	48.084	ENSOMEG00000022007	snrnp48	95	45.882	Oryzias_melastigma
ENSUAMG00000003690	SNRNP48	92	90.032	ENSOGAG00000005275	SNRNP48	96	89.905	Otolemur_garnettii
ENSUAMG00000003690	SNRNP48	85	89.547	ENSOARG00000017319	SNRNP48	100	89.547	Ovis_aries
ENSUAMG00000003690	SNRNP48	100	92.035	ENSPPAG00000032873	SNRNP48	100	93.215	Pan_paniscus
ENSUAMG00000003690	SNRNP48	100	95.870	ENSPPRG00000004283	SNRNP48	100	95.870	Panthera_pardus
ENSUAMG00000003690	SNRNP48	85	96.167	ENSPTIG00000013502	SNRNP48	100	96.167	Panthera_tigris_altaica
ENSUAMG00000003690	SNRNP48	100	92.035	ENSPTRG00000017703	SNRNP48	100	93.215	Pan_troglodytes
ENSUAMG00000003690	SNRNP48	100	91.445	ENSPANG00000000771	SNRNP48	100	92.625	Papio_anubis
ENSUAMG00000003690	SNRNP48	94	45.833	ENSPKIG00000013703	snrnp48	61	48.980	Paramormyrops_kingsleyae
ENSUAMG00000003690	SNRNP48	88	61.392	ENSPSIG00000002213	SNRNP48	94	62.092	Pelodiscus_sinensis
ENSUAMG00000003690	SNRNP48	72	48.387	ENSPMGG00000008120	snrnp48	86	48.387	Periophthalmus_magnuspinnatus
ENSUAMG00000003690	SNRNP48	100	88.496	ENSPEMG00000008872	Snrnp48	100	88.496	Peromyscus_maniculatus_bairdii
ENSUAMG00000003690	SNRNP48	72	50.607	ENSPFOG00000003578	snrnp48	92	44.681	Poecilia_formosa
ENSUAMG00000003690	SNRNP48	66	49.778	ENSPLAG00000002290	snrnp48	76	49.778	Poecilia_latipinna
ENSUAMG00000003690	SNRNP48	72	49.798	ENSPMEG00000018033	snrnp48	92	44.073	Poecilia_mexicana
ENSUAMG00000003690	SNRNP48	71	50.000	ENSPREG00000018541	snrnp48	93	44.144	Poecilia_reticulata
ENSUAMG00000003690	SNRNP48	100	90.560	ENSPPYG00000016209	SNRNP48	100	91.740	Pongo_abelii
ENSUAMG00000003690	SNRNP48	73	85.714	ENSPCAG00000011991	SNRNP48	99	71.161	Procavia_capensis
ENSUAMG00000003690	SNRNP48	100	89.676	ENSPVAG00000002854	SNRNP48	100	90.855	Pteropus_vampyrus
ENSUAMG00000003690	SNRNP48	76	48.077	ENSPNYG00000015399	snrnp48	94	45.667	Pundamilia_nyererei
ENSUAMG00000003690	SNRNP48	100	88.496	ENSRNOG00000013756	Snrnp48	100	87.611	Rattus_norvegicus
ENSUAMG00000003690	SNRNP48	91	91.290	ENSRBIG00000043856	SNRNP48	97	93.092	Rhinopithecus_bieti
ENSUAMG00000003690	SNRNP48	100	91.150	ENSRROG00000043229	SNRNP48	100	92.330	Rhinopithecus_roxellana
ENSUAMG00000003690	SNRNP48	100	90.560	ENSSBOG00000019486	SNRNP48	100	91.740	Saimiri_boliviensis_boliviensis
ENSUAMG00000003690	SNRNP48	98	71.512	ENSSHAG00000014483	SNRNP48	99	71.512	Sarcophilus_harrisii
ENSUAMG00000003690	SNRNP48	73	50.400	ENSSFOG00015006610	snrnp48	71	48.052	Scleropages_formosus
ENSUAMG00000003690	SNRNP48	87	45.946	ENSSDUG00000014953	snrnp48	95	43.452	Seriola_dumerili
ENSUAMG00000003690	SNRNP48	83	47.586	ENSSLDG00000005989	snrnp48	97	43.023	Seriola_lalandi_dorsalis
ENSUAMG00000003690	SNRNP48	84	63.758	ENSSPUG00000006257	SNRNP48	85	63.758	Sphenodon_punctatus
ENSUAMG00000003690	SNRNP48	77	48.889	ENSSPAG00000006454	snrnp48	82	47.279	Stegastes_partitus
ENSUAMG00000003690	SNRNP48	84	62.543	ENSTGUG00000007575	SNRNP48	93	62.543	Taeniopygia_guttata
ENSUAMG00000003690	SNRNP48	73	51.200	ENSTRUG00000007031	snrnp48	85	48.485	Takifugu_rubripes
ENSUAMG00000003690	SNRNP48	75	46.850	ENSTNIG00000012977	-	72	48.347	Tetraodon_nigroviridis
ENSUAMG00000003690	SNRNP48	100	75.516	ENSTBEG00000015620	SNRNP48	100	75.516	Tupaia_belangeri
ENSUAMG00000003690	SNRNP48	100	89.971	ENSTTRG00000016715	SNRNP48	100	90.855	Tursiops_truncatus
ENSUAMG00000003690	SNRNP48	85	88.502	ENSVPAG00000003557	SNRNP48	100	88.502	Vicugna_pacos
ENSUAMG00000003690	SNRNP48	99	95.846	ENSVVUG00000004996	SNRNP48	99	95.846	Vulpes_vulpes
ENSUAMG00000003690	SNRNP48	89	52.716	ENSXETG00000020447	snrnp48	99	50.000	Xenopus_tropicalis
ENSUAMG00000003690	SNRNP48	66	49.558	ENSXCOG00000004478	snrnp48	68	49.558	Xiphophorus_couchianus
ENSUAMG00000003690	SNRNP48	81	48.364	ENSXMAG00000013595	snrnp48	93	44.144	Xiphophorus_maculatus