EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000003700 (Gene tree)
Gene ID: -
Gene Symbol: APTX
Alias: AOA|AOA1|AXA1|EAOH|EOAHA|FLJ20157
Full Name: aprataxin
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 18605 bases
Position: chrLZNR01018834.1:31780-50384
Accession: 15984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004033	DcpS_C	PF11969.8	1.3e-34	1	1
ENSUAMP00000004036	DcpS_C	PF11969.8	1.5e-34	1	1
ENSUAMP00000004038	DcpS_C	PF11969.8	3.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000004596	APTX-203	969	-	ENSUAMP00000004038	322 (aa)	-	-
ENSUAMT00000004594	APTX-202	1053	-	ENSUAMP00000004036	350 (aa)	-	-
ENSUAMT00000004591	APTX-201	1453	-	ENSUAMP00000004033	324 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000003700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000003700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000003700	APTX	100	90.062	ENSG00000137074	APTX	100	90.643	Homo_sapiens
ENSUAMG00000003700	APTX	97	60.000	ENSAPOG00000008785	aptx	99	60.000	Acanthochromis_polyacanthus
ENSUAMG00000003700	APTX	98	98.256	ENSAMEG00000007648	APTX	97	98.256	Ailuropoda_melanoleuca
ENSUAMG00000003700	APTX	99	60.312	ENSACIG00000002035	aptx	99	60.312	Amphilophus_citrinellus
ENSUAMG00000003700	APTX	97	60.588	ENSAOCG00000000634	aptx	99	60.588	Amphiprion_ocellaris
ENSUAMG00000003700	APTX	97	60.588	ENSAPEG00000017253	aptx	99	60.588	Amphiprion_percula
ENSUAMG00000003700	APTX	97	60.588	ENSATEG00000017383	aptx	99	60.588	Anabas_testudineus
ENSUAMG00000003700	APTX	88	60.248	ENSAPLG00000015645	APTX	99	61.342	Anas_platyrhynchos
ENSUAMG00000003700	APTX	97	60.983	ENSACAG00000003581	APTX	95	62.319	Anolis_carolinensis
ENSUAMG00000003700	APTX	100	88.820	ENSANAG00000030160	APTX	100	87.387	Aotus_nancymaae
ENSUAMG00000003700	APTX	97	59.882	ENSACLG00000018887	aptx	100	59.882	Astatotilapia_calliptera
ENSUAMG00000003700	APTX	97	59.706	ENSAMXG00000039899	aptx	99	59.706	Astyanax_mexicanus
ENSUAMG00000003700	APTX	99	88.406	ENSBTAG00000013947	APTX	99	89.181	Bos_taurus
ENSUAMG00000003700	APTX	100	87.888	ENSCJAG00000007940	APTX	100	87.755	Callithrix_jacchus
ENSUAMG00000003700	APTX	98	95.029	ENSCAFG00000001812	APTX	100	95.029	Canis_familiaris
ENSUAMG00000003700	APTX	98	95.029	ENSCAFG00020015598	APTX	100	95.029	Canis_lupus_dingo
ENSUAMG00000003700	APTX	97	89.412	ENSCHIG00000012896	APTX	99	89.412	Capra_hircus
ENSUAMG00000003700	APTX	97	89.412	ENSTSYG00000003041	APTX	99	89.412	Carlito_syrichta
ENSUAMG00000003700	APTX	65	89.759	ENSCAPG00000013470	APTX	99	91.358	Cavia_aperea
ENSUAMG00000003700	APTX	97	87.906	ENSCPOG00000005975	APTX	99	91.875	Cavia_porcellus
ENSUAMG00000003700	APTX	97	88.856	ENSCCAG00000036783	APTX	99	88.856	Cebus_capucinus
ENSUAMG00000003700	APTX	100	89.130	ENSCATG00000042639	APTX	98	88.506	Cercocebus_atys
ENSUAMG00000003700	APTX	97	85.882	ENSCLAG00000012185	APTX	99	90.625	Chinchilla_lanigera
ENSUAMG00000003700	APTX	99	89.306	ENSCSAG00000009885	APTX	97	89.306	Chlorocebus_sabaeus
ENSUAMG00000003700	APTX	98	64.407	ENSCPBG00000023973	APTX	98	64.444	Chrysemys_picta_bellii
ENSUAMG00000003700	APTX	95	40.390	ENSCING00000008741	-	94	40.390	Ciona_intestinalis
ENSUAMG00000003700	APTX	98	38.356	ENSCSAVG00000008038	-	97	40.166	Ciona_savignyi
ENSUAMG00000003700	APTX	100	88.199	ENSCANG00000037253	APTX	99	89.412	Colobus_angolensis_palliatus
ENSUAMG00000003700	APTX	97	85.588	ENSCGRG00001000705	Aptx	99	88.750	Cricetulus_griseus_chok1gshd
ENSUAMG00000003700	APTX	97	85.588	ENSCGRG00000014159	Aptx	99	88.750	Cricetulus_griseus_crigri
ENSUAMG00000003700	APTX	97	57.726	ENSCSEG00000009549	aptx	99	57.726	Cynoglossus_semilaevis
ENSUAMG00000003700	APTX	97	58.841	ENSCVAG00000011942	aptx	99	58.841	Cyprinodon_variegatus
ENSUAMG00000003700	APTX	97	57.647	ENSDARG00000027143	aptx	99	58.651	Danio_rerio
ENSUAMG00000003700	APTX	99	87.246	ENSDNOG00000018498	APTX	97	87.246	Dasypus_novemcinctus
ENSUAMG00000003700	APTX	99	83.621	ENSDORG00000002139	Aptx	99	90.625	Dipodomys_ordii
ENSUAMG00000003700	APTX	51	40.449	FBgn0038704	CG5316	91	45.669	Drosophila_melanogaster
ENSUAMG00000003700	APTX	80	84.286	ENSETEG00000012459	APTX	79	84.286	Echinops_telfairi
ENSUAMG00000003700	APTX	96	47.578	ENSEBUG00000013914	aptx	95	47.564	Eptatretus_burgeri
ENSUAMG00000003700	APTX	98	88.596	ENSEASG00005004566	APTX	100	88.596	Equus_asinus_asinus
ENSUAMG00000003700	APTX	100	87.888	ENSECAG00000012674	APTX	93	88.372	Equus_caballus
ENSUAMG00000003700	APTX	90	85.959	ENSEEUG00000010693	APTX	100	85.294	Erinaceus_europaeus
ENSUAMG00000003700	APTX	100	93.478	ENSFCAG00000008728	APTX	100	93.860	Felis_catus
ENSUAMG00000003700	APTX	97	64.162	ENSFALG00000001230	APTX	100	64.162	Ficedula_albicollis
ENSUAMG00000003700	APTX	97	82.941	ENSFDAG00000013752	APTX	99	90.625	Fukomys_damarensis
ENSUAMG00000003700	APTX	80	55.670	ENSFHEG00000021328	aptx	73	55.670	Fundulus_heteroclitus
ENSUAMG00000003700	APTX	97	56.932	ENSGMOG00000012505	aptx	99	56.932	Gadus_morhua
ENSUAMG00000003700	APTX	97	63.143	ENSGALG00000001954	APTX	99	63.143	Gallus_gallus
ENSUAMG00000003700	APTX	97	59.824	ENSGAFG00000005086	aptx	99	59.824	Gambusia_affinis
ENSUAMG00000003700	APTX	99	56.627	ENSGACG00000017887	aptx	99	58.480	Gasterosteus_aculeatus
ENSUAMG00000003700	APTX	97	65.341	ENSGAGG00000013230	APTX	100	65.909	Gopherus_agassizii
ENSUAMG00000003700	APTX	96	89.032	ENSGGOG00000014232	APTX	95	90.775	Gorilla_gorilla
ENSUAMG00000003700	APTX	97	59.882	ENSHBUG00000021058	aptx	100	59.882	Haplochromis_burtoni
ENSUAMG00000003700	APTX	97	84.706	ENSHGLG00000015093	APTX	99	88.136	Heterocephalus_glaber_female
ENSUAMG00000003700	APTX	97	85.882	ENSHGLG00100013482	APTX	99	88.136	Heterocephalus_glaber_male
ENSUAMG00000003700	APTX	99	57.407	ENSHCOG00000018216	aptx	96	58.702	Hippocampus_comes
ENSUAMG00000003700	APTX	99	59.939	ENSIPUG00000017548	aptx	99	60.588	Ictalurus_punctatus
ENSUAMG00000003700	APTX	97	85.546	ENSSTOG00000005185	APTX	99	91.250	Ictidomys_tridecemlineatus
ENSUAMG00000003700	APTX	97	80.059	ENSJJAG00000015653	Aptx	100	80.059	Jaculus_jaculus
ENSUAMG00000003700	APTX	97	58.702	ENSKMAG00000000117	aptx	99	58.702	Kryptolebias_marmoratus
ENSUAMG00000003700	APTX	99	59.062	ENSLBEG00000015353	aptx	99	59.710	Labrus_bergylta
ENSUAMG00000003700	APTX	99	53.750	ENSLBEG00000021489	APTX	99	53.782	Labrus_bergylta
ENSUAMG00000003700	APTX	97	61.299	ENSLACG00000003376	APTX	99	61.864	Latimeria_chalumnae
ENSUAMG00000003700	APTX	99	61.299	ENSLOCG00000011556	aptx	98	61.299	Lepisosteus_oculatus
ENSUAMG00000003700	APTX	98	88.663	ENSLAFG00000005665	APTX	100	88.663	Loxodonta_africana
ENSUAMG00000003700	APTX	99	89.306	ENSMFAG00000043141	APTX	98	89.306	Macaca_fascicularis
ENSUAMG00000003700	APTX	100	89.441	ENSMMUG00000007724	APTX	98	88.793	Macaca_mulatta
ENSUAMG00000003700	APTX	100	89.130	ENSMNEG00000042341	APTX	99	90.294	Macaca_nemestrina
ENSUAMG00000003700	APTX	99	89.375	ENSMLEG00000035137	APTX	99	90.000	Mandrillus_leucophaeus
ENSUAMG00000003700	APTX	97	58.235	ENSMAMG00000018377	aptx	99	58.235	Mastacembelus_armatus
ENSUAMG00000003700	APTX	97	60.472	ENSMZEG00005022621	aptx	100	60.472	Maylandia_zebra
ENSUAMG00000003700	APTX	51	74.302	ENSMGAG00000005736	APTX	99	74.302	Meleagris_gallopavo
ENSUAMG00000003700	APTX	97	84.320	ENSMAUG00000006039	Aptx	99	88.125	Mesocricetus_auratus
ENSUAMG00000003700	APTX	99	90.909	ENSMICG00000006603	APTX	97	90.936	Microcebus_murinus
ENSUAMG00000003700	APTX	97	84.366	ENSMOCG00000000869	Aptx	99	89.375	Microtus_ochrogaster
ENSUAMG00000003700	APTX	97	62.242	ENSMMOG00000007028	aptx	99	62.242	Mola_mola
ENSUAMG00000003700	APTX	97	62.751	ENSMODG00000003365	APTX	99	62.751	Monodelphis_domestica
ENSUAMG00000003700	APTX	97	55.132	ENSMALG00000003828	aptx	99	55.132	Monopterus_albus
ENSUAMG00000003700	APTX	79	90.000	MGP_CAROLIEiJ_G0025897	-	99	90.000	Mus_caroli
ENSUAMG00000003700	APTX	99	82.709	ENSMUSG00000028411	Aptx	99	90.000	Mus_musculus
ENSUAMG00000003700	APTX	97	83.776	MGP_PahariEiJ_G0024020	Aptx	99	83.776	Mus_pahari
ENSUAMG00000003700	APTX	97	84.071	MGP_SPRETEiJ_G0026846	Aptx	97	84.071	Mus_spretus
ENSUAMG00000003700	APTX	98	95.614	ENSMPUG00000004290	APTX	100	95.614	Mustela_putorius_furo
ENSUAMG00000003700	APTX	100	89.429	ENSMLUG00000016081	APTX	97	89.429	Myotis_lucifugus
ENSUAMG00000003700	APTX	97	83.284	ENSNGAG00000016314	Aptx	99	90.625	Nannospalax_galili
ENSUAMG00000003700	APTX	97	60.177	ENSNBRG00000014199	aptx	100	60.177	Neolamprologus_brichardi
ENSUAMG00000003700	APTX	100	90.373	ENSNLEG00000032184	APTX	99	91.471	Nomascus_leucogenys
ENSUAMG00000003700	APTX	98	64.451	ENSMEUG00000004153	APTX	99	64.451	Notamacropus_eugenii
ENSUAMG00000003700	APTX	94	80.392	ENSOPRG00000012403	APTX	95	82.877	Ochotona_princeps
ENSUAMG00000003700	APTX	97	69.027	ENSODEG00000000097	-	99	70.206	Octodon_degus
ENSUAMG00000003700	APTX	97	87.977	ENSODEG00000015832	-	99	90.110	Octodon_degus
ENSUAMG00000003700	APTX	97	59.012	ENSONIG00000014541	aptx	83	59.012	Oreochromis_niloticus
ENSUAMG00000003700	APTX	90	63.279	ENSOANG00000009878	APTX	99	63.279	Ornithorhynchus_anatinus
ENSUAMG00000003700	APTX	97	89.086	ENSOCUG00000000738	-	99	90.378	Oryctolagus_cuniculus
ENSUAMG00000003700	APTX	79	91.875	ENSOCUG00000025059	-	92	91.875	Oryctolagus_cuniculus
ENSUAMG00000003700	APTX	97	58.112	ENSORLG00000006237	aptx	99	58.112	Oryzias_latipes
ENSUAMG00000003700	APTX	97	57.817	ENSORLG00020021478	aptx	99	57.817	Oryzias_latipes_hni
ENSUAMG00000003700	APTX	99	56.966	ENSORLG00015021873	aptx	99	57.941	Oryzias_latipes_hsok
ENSUAMG00000003700	APTX	85	58.140	ENSOMEG00000007875	aptx	80	58.140	Oryzias_melastigma
ENSUAMG00000003700	APTX	99	87.896	ENSOGAG00000005388	APTX	97	87.896	Otolemur_garnettii
ENSUAMG00000003700	APTX	98	89.474	ENSOARG00000009598	APTX	96	89.474	Ovis_aries
ENSUAMG00000003700	APTX	100	90.062	ENSPPAG00000030295	APTX	98	89.655	Pan_paniscus
ENSUAMG00000003700	APTX	100	93.789	ENSPPRG00000017524	APTX	100	94.152	Panthera_pardus
ENSUAMG00000003700	APTX	100	93.789	ENSPTIG00000020000	APTX	100	94.152	Panthera_tigris_altaica
ENSUAMG00000003700	APTX	100	90.062	ENSPTRG00000020850	APTX	100	90.643	Pan_troglodytes
ENSUAMG00000003700	APTX	100	89.130	ENSPANG00000025301	APTX	98	88.506	Papio_anubis
ENSUAMG00000003700	APTX	99	60.312	ENSPKIG00000013601	aptx	99	61.671	Paramormyrops_kingsleyae
ENSUAMG00000003700	APTX	99	66.379	ENSPSIG00000010521	APTX	97	66.379	Pelodiscus_sinensis
ENSUAMG00000003700	APTX	96	56.268	ENSPMGG00000018649	aptx	99	56.268	Periophthalmus_magnuspinnatus
ENSUAMG00000003700	APTX	97	86.136	ENSPEMG00000007747	Aptx	99	88.750	Peromyscus_maniculatus_bairdii
ENSUAMG00000003700	APTX	99	45.000	ENSPMAG00000008417	aptx	99	45.915	Petromyzon_marinus
ENSUAMG00000003700	APTX	97	68.678	ENSPCIG00000029852	APTX	99	68.678	Phascolarctos_cinereus
ENSUAMG00000003700	APTX	97	58.480	ENSPFOG00000004992	aptx	99	58.480	Poecilia_formosa
ENSUAMG00000003700	APTX	97	58.772	ENSPFOG00000005131	-	99	58.772	Poecilia_formosa
ENSUAMG00000003700	APTX	97	58.772	ENSPLAG00000007906	aptx	99	58.772	Poecilia_latipinna
ENSUAMG00000003700	APTX	97	58.772	ENSPLAG00000007960	APTX	99	58.772	Poecilia_latipinna
ENSUAMG00000003700	APTX	97	58.772	ENSPMEG00000019789	APTX	99	58.772	Poecilia_mexicana
ENSUAMG00000003700	APTX	97	59.064	ENSPMEG00000018504	aptx	99	59.064	Poecilia_mexicana
ENSUAMG00000003700	APTX	99	57.632	ENSPREG00000004375	aptx	99	57.632	Poecilia_reticulata
ENSUAMG00000003700	APTX	99	90.462	ENSPPYG00000019142	APTX	97	90.462	Pongo_abelii
ENSUAMG00000003700	APTX	98	73.469	ENSPCAG00000010014	APTX	100	73.469	Procavia_capensis
ENSUAMG00000003700	APTX	97	92.353	ENSPCOG00000016780	APTX	99	92.353	Propithecus_coquereli
ENSUAMG00000003700	APTX	98	88.630	ENSPVAG00000011468	APTX	97	88.630	Pteropus_vampyrus
ENSUAMG00000003700	APTX	97	59.882	ENSPNYG00000007675	aptx	100	59.882	Pundamilia_nyererei
ENSUAMG00000003700	APTX	97	58.235	ENSPNAG00000015984	aptx	99	58.235	Pygocentrus_nattereri
ENSUAMG00000003700	APTX	97	79.941	ENSRNOG00000006582	Aptx	99	79.941	Rattus_norvegicus
ENSUAMG00000003700	APTX	100	88.509	ENSRBIG00000042913	APTX	99	89.706	Rhinopithecus_bieti
ENSUAMG00000003700	APTX	100	88.199	ENSRROG00000035395	APTX	99	89.412	Rhinopithecus_roxellana
ENSUAMG00000003700	APTX	97	89.412	ENSSBOG00000025215	APTX	99	89.412	Saimiri_boliviensis_boliviensis
ENSUAMG00000003700	APTX	97	68.437	ENSSHAG00000012205	APTX	95	68.437	Sarcophilus_harrisii
ENSUAMG00000003700	APTX	97	64.205	ENSSFOG00015009267	aptx	99	64.205	Scleropages_formosus
ENSUAMG00000003700	APTX	97	61.176	ENSSMAG00000008839	aptx	99	61.176	Scophthalmus_maximus
ENSUAMG00000003700	APTX	97	61.176	ENSSDUG00000001989	aptx	99	61.176	Seriola_dumerili
ENSUAMG00000003700	APTX	97	61.176	ENSSLDG00000004915	aptx	99	61.176	Seriola_lalandi_dorsalis
ENSUAMG00000003700	APTX	99	63.483	ENSSPUG00000008994	APTX	88	63.483	Sphenodon_punctatus
ENSUAMG00000003700	APTX	97	60.882	ENSSPAG00000020373	aptx	99	60.882	Stegastes_partitus
ENSUAMG00000003700	APTX	98	90.058	ENSSSCG00000011001	APTX	100	90.058	Sus_scrofa
ENSUAMG00000003700	APTX	98	62.784	ENSTGUG00000001441	APTX	100	62.784	Taeniopygia_guttata
ENSUAMG00000003700	APTX	97	59.531	ENSTRUG00000009794	aptx	99	59.531	Takifugu_rubripes
ENSUAMG00000003700	APTX	97	60.294	ENSTNIG00000010570	aptx	99	60.294	Tetraodon_nigroviridis
ENSUAMG00000003700	APTX	99	82.353	ENSTBEG00000008504	APTX	96	82.353	Tupaia_belangeri
ENSUAMG00000003700	APTX	94	84.641	ENSTTRG00000007384	APTX	98	81.902	Tursiops_truncatus
ENSUAMG00000003700	APTX	98	100.000	ENSUMAG00000005837	APTX	100	100.000	Ursus_maritimus
ENSUAMG00000003700	APTX	70	93.617	ENSVPAG00000001297	APTX	99	62.391	Vicugna_pacos
ENSUAMG00000003700	APTX	98	95.029	ENSVVUG00000021130	APTX	100	95.029	Vulpes_vulpes
ENSUAMG00000003700	APTX	97	59.714	ENSXETG00000024143	aptx	99	59.429	Xenopus_tropicalis
ENSUAMG00000003700	APTX	97	56.901	ENSXCOG00000005020	aptx	99	56.901	Xiphophorus_couchianus
ENSUAMG00000003700	APTX	97	59.706	ENSXMAG00000022086	aptx	96	59.706	Xiphophorus_maculatus