EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000003773 (Gene tree)
Gene ID: -
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrLZNR01018879.1:17537-20272
Accession: 6601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004110	RNA_ligase	PF09414.10	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000004683	LIG4-201	2736	-	ENSUAMP00000004110	911 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000003773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000003773's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000003773	LIG4	100	89.243	ENSG00000174405	LIG4	100	89.336	Homo_sapiens
ENSUAMG00000003773	LIG4	99	64.168	ENSAPOG00000000866	lig4	99	64.498	Acanthochromis_polyacanthus
ENSUAMG00000003773	LIG4	100	98.134	ENSAMEG00000019685	LIG4	99	98.134	Ailuropoda_melanoleuca
ENSUAMG00000003773	LIG4	99	64.207	ENSACIG00000018309	lig4	99	64.537	Amphilophus_citrinellus
ENSUAMG00000003773	LIG4	99	64.136	ENSAOCG00000011768	lig4	99	64.466	Amphiprion_ocellaris
ENSUAMG00000003773	LIG4	99	64.246	ENSAPEG00000017815	lig4	99	64.576	Amphiprion_percula
ENSUAMG00000003773	LIG4	99	64.563	ENSATEG00000005583	lig4	99	64.784	Anabas_testudineus
ENSUAMG00000003773	LIG4	97	73.182	ENSAPLG00000001673	LIG4	99	73.182	Anas_platyrhynchos
ENSUAMG00000003773	LIG4	99	72.338	ENSACAG00000014566	LIG4	100	72.338	Anolis_carolinensis
ENSUAMG00000003773	LIG4	100	88.255	ENSANAG00000012446	LIG4	100	88.255	Aotus_nancymaae
ENSUAMG00000003773	LIG4	99	64.452	ENSACLG00000027051	lig4	99	64.452	Astatotilapia_calliptera
ENSUAMG00000003773	LIG4	99	63.907	ENSAMXG00000008192	lig4	93	63.907	Astyanax_mexicanus
ENSUAMG00000003773	LIG4	100	88.145	ENSBTAG00000015868	LIG4	100	88.145	Bos_taurus
ENSUAMG00000003773	LIG4	100	87.486	ENSCJAG00000014689	LIG4	100	87.486	Callithrix_jacchus
ENSUAMG00000003773	LIG4	100	93.194	ENSCAFG00000006031	LIG4	100	93.194	Canis_familiaris
ENSUAMG00000003773	LIG4	100	93.194	ENSCAFG00020021230	LIG4	100	93.194	Canis_lupus_dingo
ENSUAMG00000003773	LIG4	100	87.816	ENSCHIG00000001019	LIG4	100	87.816	Capra_hircus
ENSUAMG00000003773	LIG4	99	87.375	ENSCAPG00000006284	LIG4	99	87.375	Cavia_aperea
ENSUAMG00000003773	LIG4	100	87.157	ENSCPOG00000014266	LIG4	100	87.157	Cavia_porcellus
ENSUAMG00000003773	LIG4	100	88.035	ENSCCAG00000019971	LIG4	100	88.035	Cebus_capucinus
ENSUAMG00000003773	LIG4	100	88.913	ENSCATG00000021075	LIG4	100	88.913	Cercocebus_atys
ENSUAMG00000003773	LIG4	100	87.377	ENSCLAG00000003376	LIG4	100	87.377	Chinchilla_lanigera
ENSUAMG00000003773	LIG4	100	89.352	ENSCSAG00000000211	LIG4	100	89.352	Chlorocebus_sabaeus
ENSUAMG00000003773	LIG4	99	76.243	ENSCPBG00000023291	LIG4	99	75.904	Chrysemys_picta_bellii
ENSUAMG00000003773	LIG4	68	45.223	ENSCING00000009536	-	95	45.223	Ciona_intestinalis
ENSUAMG00000003773	LIG4	83	44.751	ENSCSAVG00000010336	-	98	44.751	Ciona_savignyi
ENSUAMG00000003773	LIG4	100	89.023	ENSCANG00000005805	LIG4	100	89.023	Colobus_angolensis_palliatus
ENSUAMG00000003773	LIG4	100	83.991	ENSCGRG00001012072	Lig4	100	83.991	Cricetulus_griseus_chok1gshd
ENSUAMG00000003773	LIG4	100	83.991	ENSCGRG00000013417	Lig4	100	83.991	Cricetulus_griseus_crigri
ENSUAMG00000003773	LIG4	97	64.853	ENSCSEG00000013905	lig4	95	64.853	Cynoglossus_semilaevis
ENSUAMG00000003773	LIG4	99	64.712	ENSCVAG00000007896	lig4	99	64.712	Cyprinodon_variegatus
ENSUAMG00000003773	LIG4	99	63.566	ENSDARG00000060620	lig4	98	63.566	Danio_rerio
ENSUAMG00000003773	LIG4	100	87.281	ENSDNOG00000000513	LIG4	100	87.281	Dasypus_novemcinctus
ENSUAMG00000003773	LIG4	100	85.291	ENSDORG00000027303	Lig4	100	85.291	Dipodomys_ordii
ENSUAMG00000003773	LIG4	89	31.213	FBgn0030506	Lig4	90	31.213	Drosophila_melanogaster
ENSUAMG00000003773	LIG4	99	83.259	ENSETEG00000015563	LIG4	100	83.592	Echinops_telfairi
ENSUAMG00000003773	LIG4	99	43.776	ENSEBUG00000014243	lig4	99	43.776	Eptatretus_burgeri
ENSUAMG00000003773	LIG4	100	90.450	ENSEASG00005022073	LIG4	100	90.450	Equus_asinus_asinus
ENSUAMG00000003773	LIG4	100	90.231	ENSECAG00000003257	LIG4	100	90.231	Equus_caballus
ENSUAMG00000003773	LIG4	99	65.265	ENSELUG00000006787	lig4	99	65.376	Esox_lucius
ENSUAMG00000003773	LIG4	100	92.316	ENSFCAG00000031985	LIG4	100	92.316	Felis_catus
ENSUAMG00000003773	LIG4	89	73.613	ENSFALG00000004214	LIG4	98	73.613	Ficedula_albicollis
ENSUAMG00000003773	LIG4	100	86.718	ENSFDAG00000008973	LIG4	100	86.718	Fukomys_damarensis
ENSUAMG00000003773	LIG4	99	63.987	ENSFHEG00000007398	lig4	89	64.270	Fundulus_heteroclitus
ENSUAMG00000003773	LIG4	85	63.286	ENSGMOG00000012843	lig4	99	63.286	Gadus_morhua
ENSUAMG00000003773	LIG4	99	72.887	ENSGALG00000016854	LIG4	99	72.887	Gallus_gallus
ENSUAMG00000003773	LIG4	99	64.254	ENSGAFG00000019779	lig4	95	64.505	Gambusia_affinis
ENSUAMG00000003773	LIG4	99	62.279	ENSGACG00000014135	lig4	99	62.404	Gasterosteus_aculeatus
ENSUAMG00000003773	LIG4	100	89.352	ENSGGOG00000027771	LIG4	100	89.352	Gorilla_gorilla
ENSUAMG00000003773	LIG4	99	64.230	ENSHBUG00000006245	lig4	99	64.230	Haplochromis_burtoni
ENSUAMG00000003773	LIG4	100	87.157	ENSHGLG00000000718	LIG4	100	87.157	Heterocephalus_glaber_female
ENSUAMG00000003773	LIG4	100	87.157	ENSHGLG00100003265	LIG4	100	87.157	Heterocephalus_glaber_male
ENSUAMG00000003773	LIG4	99	63.227	ENSHCOG00000012010	lig4	99	63.227	Hippocampus_comes
ENSUAMG00000003773	LIG4	99	64.874	ENSIPUG00000013748	lig4	99	64.874	Ictalurus_punctatus
ENSUAMG00000003773	LIG4	100	87.267	ENSSTOG00000024303	LIG4	100	87.267	Ictidomys_tridecemlineatus
ENSUAMG00000003773	LIG4	100	85.950	ENSJJAG00000006750	Lig4	100	85.950	Jaculus_jaculus
ENSUAMG00000003773	LIG4	99	64.530	ENSKMAG00000001149	lig4	99	64.530	Kryptolebias_marmoratus
ENSUAMG00000003773	LIG4	91	64.183	ENSLBEG00000014578	lig4	100	64.543	Labrus_bergylta
ENSUAMG00000003773	LIG4	99	71.053	ENSLACG00000003282	LIG4	99	71.053	Latimeria_chalumnae
ENSUAMG00000003773	LIG4	99	68.421	ENSLOCG00000008901	lig4	98	68.421	Lepisosteus_oculatus
ENSUAMG00000003773	LIG4	100	85.761	ENSLAFG00000031152	LIG4	100	85.761	Loxodonta_africana
ENSUAMG00000003773	LIG4	100	89.133	ENSMFAG00000037235	LIG4	100	89.133	Macaca_fascicularis
ENSUAMG00000003773	LIG4	100	89.133	ENSMMUG00000008874	LIG4	100	89.133	Macaca_mulatta
ENSUAMG00000003773	LIG4	100	89.133	ENSMNEG00000023575	LIG4	100	89.133	Macaca_nemestrina
ENSUAMG00000003773	LIG4	100	89.023	ENSMLEG00000026720	LIG4	100	89.023	Mandrillus_leucophaeus
ENSUAMG00000003773	LIG4	99	64.066	ENSMAMG00000008472	lig4	99	64.396	Mastacembelus_armatus
ENSUAMG00000003773	LIG4	99	64.452	ENSMZEG00005001855	lig4	99	64.452	Maylandia_zebra
ENSUAMG00000003773	LIG4	99	73.436	ENSMGAG00000015532	LIG4	99	73.436	Meleagris_gallopavo
ENSUAMG00000003773	LIG4	100	82.547	ENSMOCG00000019000	Lig4	100	82.547	Microtus_ochrogaster
ENSUAMG00000003773	LIG4	99	63.164	ENSMMOG00000004390	lig4	99	63.164	Mola_mola
ENSUAMG00000003773	LIG4	100	81.668	ENSMODG00000025064	LIG4	100	82.127	Monodelphis_domestica
ENSUAMG00000003773	LIG4	99	63.767	ENSMALG00000008555	lig4	99	63.767	Monopterus_albus
ENSUAMG00000003773	LIG4	100	84.193	MGP_CAROLIEiJ_G0030809	Lig4	100	84.193	Mus_caroli
ENSUAMG00000003773	LIG4	100	83.644	ENSMUSG00000049717	Lig4	100	83.644	Mus_musculus
ENSUAMG00000003773	LIG4	100	83.974	MGP_PahariEiJ_G0021270	Lig4	100	83.974	Mus_pahari
ENSUAMG00000003773	LIG4	100	83.754	MGP_SPRETEiJ_G0031917	Lig4	100	83.754	Mus_spretus
ENSUAMG00000003773	LIG4	100	93.853	ENSMPUG00000018675	LIG4	100	93.853	Mustela_putorius_furo
ENSUAMG00000003773	LIG4	100	89.023	ENSMLUG00000001267	LIG4	100	89.023	Myotis_lucifugus
ENSUAMG00000003773	LIG4	100	84.632	ENSNGAG00000013258	Lig4	100	84.632	Nannospalax_galili
ENSUAMG00000003773	LIG4	99	63.956	ENSNBRG00000021252	lig4	99	63.956	Neolamprologus_brichardi
ENSUAMG00000003773	LIG4	100	89.572	ENSNLEG00000007888	LIG4	100	89.572	Nomascus_leucogenys
ENSUAMG00000003773	LIG4	100	85.730	ENSOPRG00000005765	LIG4	100	85.730	Ochotona_princeps
ENSUAMG00000003773	LIG4	100	84.962	ENSODEG00000019683	LIG4	100	84.962	Octodon_degus
ENSUAMG00000003773	LIG4	99	64.230	ENSONIG00000011969	lig4	97	64.563	Oreochromis_niloticus
ENSUAMG00000003773	LIG4	100	88.035	ENSOCUG00000015734	LIG4	100	88.035	Oryctolagus_cuniculus
ENSUAMG00000003773	LIG4	99	63.204	ENSORLG00000004041	lig4	98	63.204	Oryzias_latipes
ENSUAMG00000003773	LIG4	99	63.315	ENSORLG00020019607	lig4	98	63.315	Oryzias_latipes_hni
ENSUAMG00000003773	LIG4	99	63.315	ENSORLG00015017754	lig4	98	63.315	Oryzias_latipes_hsok
ENSUAMG00000003773	LIG4	74	68.000	ENSOMEG00000003459	lig4	98	68.000	Oryzias_melastigma
ENSUAMG00000003773	LIG4	100	87.829	ENSOGAG00000032120	LIG4	99	87.829	Otolemur_garnettii
ENSUAMG00000003773	LIG4	82	89.664	ENSOARG00000005590	LIG4	98	89.664	Ovis_aries
ENSUAMG00000003773	LIG4	100	88.804	ENSPPAG00000032998	LIG4	100	88.804	Pan_paniscus
ENSUAMG00000003773	LIG4	100	92.316	ENSPPRG00000017804	LIG4	100	92.316	Panthera_pardus
ENSUAMG00000003773	LIG4	100	92.206	ENSPTIG00000010051	LIG4	100	92.206	Panthera_tigris_altaica
ENSUAMG00000003773	LIG4	100	88.913	ENSPTRG00000006025	LIG4	100	88.913	Pan_troglodytes
ENSUAMG00000003773	LIG4	100	89.023	ENSPANG00000007562	LIG4	100	89.023	Papio_anubis
ENSUAMG00000003773	LIG4	99	65.714	ENSPKIG00000011645	lig4	98	65.714	Paramormyrops_kingsleyae
ENSUAMG00000003773	LIG4	99	75.960	ENSPSIG00000001504	LIG4	99	75.960	Pelodiscus_sinensis
ENSUAMG00000003773	LIG4	99	62.000	ENSPMGG00000013486	lig4	99	61.690	Periophthalmus_magnuspinnatus
ENSUAMG00000003773	LIG4	100	84.539	ENSPEMG00000000076	Lig4	100	84.539	Peromyscus_maniculatus_bairdii
ENSUAMG00000003773	LIG4	100	81.798	ENSPCIG00000021882	LIG4	100	81.798	Phascolarctos_cinereus
ENSUAMG00000003773	LIG4	99	64.850	ENSPFOG00000000797	lig4	99	64.505	Poecilia_formosa
ENSUAMG00000003773	LIG4	99	64.739	ENSPLAG00000001196	lig4	99	64.396	Poecilia_latipinna
ENSUAMG00000003773	LIG4	99	64.850	ENSPMEG00000021353	lig4	99	64.615	Poecilia_mexicana
ENSUAMG00000003773	LIG4	99	64.627	ENSPREG00000007323	lig4	99	64.544	Poecilia_reticulata
ENSUAMG00000003773	LIG4	100	88.913	ENSPPYG00000005540	LIG4	100	88.913	Pongo_abelii
ENSUAMG00000003773	LIG4	100	88.694	ENSPVAG00000016403	LIG4	100	88.694	Pteropus_vampyrus
ENSUAMG00000003773	LIG4	99	64.341	ENSPNYG00000009660	lig4	99	64.341	Pundamilia_nyererei
ENSUAMG00000003773	LIG4	100	63.417	ENSPNAG00000028069	LIG4	100	63.746	Pygocentrus_nattereri
ENSUAMG00000003773	LIG4	100	63.417	ENSPNAG00000028056	lig4	100	63.746	Pygocentrus_nattereri
ENSUAMG00000003773	LIG4	100	83.095	ENSRNOG00000014605	Lig4	100	83.095	Rattus_norvegicus
ENSUAMG00000003773	LIG4	100	87.486	ENSRBIG00000039962	LIG4	100	87.486	Rhinopithecus_bieti
ENSUAMG00000003773	LIG4	100	88.364	ENSRROG00000006040	LIG4	100	88.364	Rhinopithecus_roxellana
ENSUAMG00000003773	LIG4	100	87.706	ENSSBOG00000019029	LIG4	100	87.706	Saimiri_boliviensis_boliviensis
ENSUAMG00000003773	LIG4	100	78.728	ENSSHAG00000009525	LIG4	100	78.728	Sarcophilus_harrisii
ENSUAMG00000003773	LIG4	99	64.452	ENSSFOG00015012835	lig4	99	64.452	Scleropages_formosus
ENSUAMG00000003773	LIG4	99	62.058	ENSSMAG00000011267	lig4	99	62.058	Scophthalmus_maximus
ENSUAMG00000003773	LIG4	99	64.634	ENSSDUG00000010343	lig4	98	64.634	Seriola_dumerili
ENSUAMG00000003773	LIG4	99	63.012	ENSSLDG00000003239	lig4	99	63.012	Seriola_lalandi_dorsalis
ENSUAMG00000003773	LIG4	100	82.713	ENSSARG00000006573	LIG4	100	82.713	Sorex_araneus
ENSUAMG00000003773	LIG4	93	74.763	ENSSPUG00000002444	LIG4	100	74.763	Sphenodon_punctatus
ENSUAMG00000003773	LIG4	99	64.491	ENSSPAG00000001609	lig4	99	64.491	Stegastes_partitus
ENSUAMG00000003773	LIG4	100	88.255	ENSSSCG00000009540	LIG4	100	88.255	Sus_scrofa
ENSUAMG00000003773	LIG4	99	73.090	ENSTGUG00000010795	LIG4	99	73.090	Taeniopygia_guttata
ENSUAMG00000003773	LIG4	99	63.827	ENSTRUG00000009984	lig4	99	63.827	Takifugu_rubripes
ENSUAMG00000003773	LIG4	99	64.341	ENSTNIG00000010348	lig4	99	64.563	Tetraodon_nigroviridis
ENSUAMG00000003773	LIG4	100	87.816	ENSTBEG00000017741	LIG4	100	87.816	Tupaia_belangeri
ENSUAMG00000003773	LIG4	100	89.462	ENSTTRG00000012660	LIG4	100	89.462	Tursiops_truncatus
ENSUAMG00000003773	LIG4	99	70.321	ENSXETG00000002654	lig4	99	70.321	Xenopus_tropicalis
ENSUAMG00000003773	LIG4	99	64.294	ENSXCOG00000017401	lig4	99	63.956	Xiphophorus_couchianus
ENSUAMG00000003773	LIG4	99	64.889	ENSXMAG00000015142	lig4	99	64.544	Xiphophorus_maculatus