EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000004427 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 2770 bases
Position: chrLZNR01000004.1:612399-615168
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004881	APOBEC_N	PF08210.11	4.7e-41	1	1
ENSUAMP00000004881	APOBEC_C	PF05240.14	4.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000005561	-	666	-	ENSUAMP00000004881	221 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000004427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004427's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000004427	-	83	32.620	ENSUAMG00000004433	-	99	32.620
ENSUAMG00000004427	-	81	35.519	ENSUAMG00000011642	AICDA	93	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004427	-	83	47.872	ENSG00000100298	APOBEC3H	99	47.872	Homo_sapiens
ENSUAMG00000004427	-	89	81.683	ENSAMEG00000010818	-	86	81.683	Ailuropoda_melanoleuca
ENSUAMG00000004427	-	86	47.208	ENSANAG00000025410	APOBEC3H	85	47.208	Aotus_nancymaae
ENSUAMG00000004427	-	85	55.615	ENSBTAG00000007755	APOBEC3H	94	55.376	Bos_taurus
ENSUAMG00000004427	-	83	48.663	ENSCJAG00000012524	APOBEC3H	91	49.660	Callithrix_jacchus
ENSUAMG00000004427	-	85	61.702	ENSCAFG00000001361	APOBEC3Z3	94	61.702	Canis_familiaris
ENSUAMG00000004427	-	86	59.474	ENSCAFG00020002584	-	95	59.474	Canis_lupus_dingo
ENSUAMG00000004427	-	85	56.150	ENSCHIG00000026580	-	95	55.914	Capra_hircus
ENSUAMG00000004427	-	81	52.222	ENSTSYG00000032894	-	99	52.222	Carlito_syrichta
ENSUAMG00000004427	-	87	51.309	ENSCPOG00000009257	-	87	51.309	Cavia_porcellus
ENSUAMG00000004427	-	83	48.421	ENSCCAG00000008525	APOBEC3H	91	49.333	Cebus_capucinus
ENSUAMG00000004427	-	83	50.267	ENSCATG00000030302	APOBEC3H	99	50.267	Cercocebus_atys
ENSUAMG00000004427	-	88	50.256	ENSCLAG00000016615	-	93	50.256	Chinchilla_lanigera
ENSUAMG00000004427	-	83	51.872	ENSCSAG00000006371	APOBEC3H	85	51.872	Chlorocebus_sabaeus
ENSUAMG00000004427	-	86	52.284	ENSCGRG00001022976	Apobec3	88	52.284	Cricetulus_griseus_chok1gshd
ENSUAMG00000004427	-	86	52.284	ENSCGRG00000005621	Apobec3	88	52.284	Cricetulus_griseus_crigri
ENSUAMG00000004427	-	86	51.795	ENSDORG00000027271	-	92	51.795	Dipodomys_ordii
ENSUAMG00000004427	-	85	55.851	ENSECAG00000007726	APOBEC3H	78	55.851	Equus_caballus
ENSUAMG00000004427	-	86	60.317	ENSFCAG00000005251	APOBEC3Z3	94	60.317	Felis_catus
ENSUAMG00000004427	-	83	54.839	ENSSTOG00000007125	-	86	54.839	Ictidomys_tridecemlineatus
ENSUAMG00000004427	-	82	52.817	ENSJJAG00000016840	-	83	52.817	Jaculus_jaculus
ENSUAMG00000004427	-	86	45.263	ENSLAFG00000027404	-	97	45.263	Loxodonta_africana
ENSUAMG00000004427	-	85	51.832	ENSMFAG00000031827	APOBEC3H	91	52.381	Macaca_fascicularis
ENSUAMG00000004427	-	85	51.309	ENSMMUG00000001016	APOBEC3H	91	52.381	Macaca_mulatta
ENSUAMG00000004427	-	85	51.832	ENSMNEG00000039259	APOBEC3H	91	52.381	Macaca_nemestrina
ENSUAMG00000004427	-	83	50.267	ENSMLEG00000033417	APOBEC3H	91	50.340	Mandrillus_leucophaeus
ENSUAMG00000004427	-	85	53.226	ENSMAUG00000011683	Apobec3	90	53.226	Mesocricetus_auratus
ENSUAMG00000004427	-	90	49.246	ENSMOCG00000021576	Apobec3	86	49.749	Microtus_ochrogaster
ENSUAMG00000004427	-	89	44.221	MGP_CAROLIEiJ_G0020029	Apobec3	100	42.353	Mus_caroli
ENSUAMG00000004427	-	88	48.901	ENSMUSG00000009585	Apobec3	100	49.074	Mus_musculus
ENSUAMG00000004427	-	87	45.178	MGP_PahariEiJ_G0020031	-	86	45.876	Mus_pahari
ENSUAMG00000004427	-	89	47.000	MGP_SPRETEiJ_G0020927	Apobec3	100	42.353	Mus_spretus
ENSUAMG00000004427	-	91	64.103	ENSMPUG00000013239	-	90	64.103	Mustela_putorius_furo
ENSUAMG00000004427	-	94	50.785	ENSNGAG00000018998	Apobec3	95	50.785	Nannospalax_galili
ENSUAMG00000004427	-	83	49.198	ENSNLEG00000015218	-	85	49.198	Nomascus_leucogenys
ENSUAMG00000004427	-	85	41.489	ENSOCUG00000023913	-	89	41.489	Oryctolagus_cuniculus
ENSUAMG00000004427	-	84	56.216	ENSOARG00000016290	APOBEC3F	96	56.216	Ovis_aries
ENSUAMG00000004427	-	83	48.936	ENSPPAG00000036522	APOBEC3H	98	48.936	Pan_paniscus
ENSUAMG00000004427	-	86	62.105	ENSPPRG00000003941	-	94	62.105	Panthera_pardus
ENSUAMG00000004427	-	85	34.392	ENSPPRG00000003675	-	95	34.392	Panthera_pardus
ENSUAMG00000004427	-	86	62.105	ENSPTIG00000010283	-	94	62.105	Panthera_tigris_altaica
ENSUAMG00000004427	-	83	48.936	ENSPTRG00000014390	APOBEC3H	98	48.936	Pan_troglodytes
ENSUAMG00000004427	-	85	50.785	ENSPANG00000010774	APOBEC3H	94	48.128	Papio_anubis
ENSUAMG00000004427	-	90	49.505	ENSPEMG00000000456	Apobec3	87	49.505	Peromyscus_maniculatus_bairdii
ENSUAMG00000004427	-	83	49.198	ENSPPYG00000011834	-	85	49.198	Pongo_abelii
ENSUAMG00000004427	-	82	43.956	ENSPCAG00000015655	-	98	43.956	Procavia_capensis
ENSUAMG00000004427	-	83	52.174	ENSPVAG00000009462	-	99	52.174	Pteropus_vampyrus
ENSUAMG00000004427	-	56	34.677	ENSPVAG00000024267	-	94	34.677	Pteropus_vampyrus
ENSUAMG00000004427	-	56	36.290	ENSPVAG00000024161	-	94	36.290	Pteropus_vampyrus
ENSUAMG00000004427	-	86	47.120	ENSRNOG00000016852	Apobec3	92	47.120	Rattus_norvegicus
ENSUAMG00000004427	-	83	49.733	ENSRBIG00000029088	APOBEC3H	90	51.034	Rhinopithecus_bieti
ENSUAMG00000004427	-	88	48.744	ENSRROG00000024699	APOBEC3H	90	51.034	Rhinopithecus_roxellana
ENSUAMG00000004427	-	84	47.396	ENSSBOG00000030005	APOBEC3H	100	47.973	Saimiri_boliviensis_boliviensis
ENSUAMG00000004427	-	92	55.026	ENSSSCG00000000091	APOBEC3B	83	53.731	Sus_scrofa
ENSUAMG00000004427	-	81	53.933	ENSTBEG00000001532	-	100	53.933	Tupaia_belangeri
ENSUAMG00000004427	-	83	55.978	ENSTTRG00000001266	-	99	55.978	Tursiops_truncatus
ENSUAMG00000004427	-	85	94.149	ENSUMAG00000014435	-	92	94.086	Ursus_maritimus
ENSUAMG00000004427	-	57	58.400	ENSVPAG00000011108	-	98	58.400	Vicugna_pacos
ENSUAMG00000004427	-	84	61.111	ENSVVUG00000014624	-	60	61.111	Vulpes_vulpes