EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000004433 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 2387 bases
Position: chrLZNR01000004.1:621997-624383
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000004887	APOBEC_N	PF08210.11	9.5e-45	1	1
ENSUAMP00000004887	APOBEC_C	PF05240.14	5.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000005567	-	777	-	ENSUAMP00000004887	178 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000004433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000004433	-	83	34.211	ENSUAMG00000027667	APOBEC2	65	35.526
ENSUAMG00000004433	-	99	41.209	ENSUAMG00000011642	AICDA	98	42.361
ENSUAMG00000004433	-	99	32.620	ENSUAMG00000004427	-	83	32.620
ENSUAMG00000004433	-	74	36.364	ENSUAMG00000011636	APOBEC1	52	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004433	-	89	49.068	ENSG00000244509	APOBEC3C	85	49.068	Homo_sapiens
ENSUAMG00000004433	-	99	46.961	ENSG00000128394	APOBEC3F	89	46.961	Homo_sapiens
ENSUAMG00000004433	-	100	43.407	ENSG00000243811	APOBEC3D	96	43.407	Homo_sapiens
ENSUAMG00000004433	-	99	46.409	ENSANAG00000030088	-	90	46.409	Aotus_nancymaae
ENSUAMG00000004433	-	70	50.400	ENSCJAG00000015317	-	95	50.400	Callithrix_jacchus
ENSUAMG00000004433	-	99	60.656	ENSCAFG00020002615	-	96	60.656	Canis_lupus_dingo
ENSUAMG00000004433	-	99	45.055	ENSTSYG00000028254	-	98	45.055	Carlito_syrichta
ENSUAMG00000004433	-	100	43.503	ENSTSYG00000034260	-	95	43.503	Carlito_syrichta
ENSUAMG00000004433	-	89	42.945	ENSTSYG00000030036	-	88	42.945	Carlito_syrichta
ENSUAMG00000004433	-	100	45.055	ENSCCAG00000030932	-	82	45.055	Cebus_capucinus
ENSUAMG00000004433	-	100	46.703	ENSCATG00000033502	-	94	46.703	Cercocebus_atys
ENSUAMG00000004433	-	99	45.304	ENSCATG00000043226	APOBEC3C	95	45.304	Cercocebus_atys
ENSUAMG00000004433	-	89	49.689	ENSCSAG00000006402	APOBEC3C	85	49.689	Chlorocebus_sabaeus
ENSUAMG00000004433	-	100	44.199	ENSCSAG00000006382	APOBEC3F	97	44.199	Chlorocebus_sabaeus
ENSUAMG00000004433	-	100	45.856	ENSCANG00000031957	-	98	45.856	Colobus_angolensis_palliatus
ENSUAMG00000004433	-	93	50.595	ENSCANG00000039177	APOBEC3C	88	50.595	Colobus_angolensis_palliatus
ENSUAMG00000004433	-	100	45.810	ENSCANG00000033269	-	98	45.810	Colobus_angolensis_palliatus
ENSUAMG00000004433	-	100	48.619	ENSCANG00000032904	-	97	48.619	Colobus_angolensis_palliatus
ENSUAMG00000004433	-	88	40.373	ENSDNOG00000044642	-	87	40.373	Dasypus_novemcinctus
ENSUAMG00000004433	-	100	45.596	ENSEASG00005018641	-	95	45.596	Equus_asinus_asinus
ENSUAMG00000004433	-	100	52.747	ENSECAG00000006071	-	99	51.099	Equus_caballus
ENSUAMG00000004433	-	100	46.703	ENSGGOG00000038678	APOBEC3F	89	46.961	Gorilla_gorilla
ENSUAMG00000004433	-	100	43.956	ENSGGOG00000036587	-	96	43.956	Gorilla_gorilla
ENSUAMG00000004433	-	100	44.586	ENSHGLG00000017315	-	85	42.458	Heterocephalus_glaber_female
ENSUAMG00000004433	-	100	43.353	ENSHGLG00100003105	-	91	43.353	Heterocephalus_glaber_male
ENSUAMG00000004433	-	99	46.961	ENSMFAG00000004037	APOBEC3F	89	46.961	Macaca_fascicularis
ENSUAMG00000004433	-	89	50.311	ENSMFAG00000016792	APOBEC3C	85	50.311	Macaca_fascicularis
ENSUAMG00000004433	-	100	50.311	ENSMFAG00000002331	-	92	50.311	Macaca_fascicularis
ENSUAMG00000004433	-	100	46.409	ENSMMUG00000004017	APOBEC3F	98	46.409	Macaca_mulatta
ENSUAMG00000004433	-	100	46.154	ENSMMUG00000004018	APOBEC3C	94	46.154	Macaca_mulatta
ENSUAMG00000004433	-	99	46.961	ENSMNEG00000043316	APOBEC3D	92	46.961	Macaca_nemestrina
ENSUAMG00000004433	-	89	47.826	ENSMNEG00000045196	APOBEC3C	85	47.826	Macaca_nemestrina
ENSUAMG00000004433	-	99	45.856	ENSMLEG00000036992	APOBEC3C	95	45.856	Mandrillus_leucophaeus
ENSUAMG00000004433	-	100	46.409	ENSMLEG00000029642	APOBEC3F	95	46.409	Mandrillus_leucophaeus
ENSUAMG00000004433	-	97	46.243	ENSMICG00000042615	-	83	46.243	Microcebus_murinus
ENSUAMG00000004433	-	99	43.850	ENSMLUG00000023676	-	99	43.850	Myotis_lucifugus
ENSUAMG00000004433	-	89	40.909	ENSNLEG00000035811	-	84	40.909	Nomascus_leucogenys
ENSUAMG00000004433	-	100	50.549	ENSNLEG00000028392	APOBEC3C	96	50.549	Nomascus_leucogenys
ENSUAMG00000004433	-	99	42.767	ENSOGAG00000033404	-	92	42.767	Otolemur_garnettii
ENSUAMG00000004433	-	99	37.222	ENSOGAG00000030300	-	96	37.222	Otolemur_garnettii
ENSUAMG00000004433	-	100	43.949	ENSOGAG00000032498	-	92	43.949	Otolemur_garnettii
ENSUAMG00000004433	-	100	46.602	ENSPPAG00000028218	-	96	46.154	Pan_paniscus
ENSUAMG00000004433	-	89	49.068	ENSPPAG00000014118	APOBEC3C	85	49.068	Pan_paniscus
ENSUAMG00000004433	-	100	64.444	ENSPPRG00000003726	-	96	64.444	Panthera_pardus
ENSUAMG00000004433	-	100	46.703	ENSPTRG00000014385	APOBEC3C	94	46.703	Pan_troglodytes
ENSUAMG00000004433	-	100	45.604	ENSPTRG00000041588	APOBEC3D	96	45.604	Pan_troglodytes
ENSUAMG00000004433	-	99	47.222	ENSPANG00000010775	APOBEC3F	98	47.222	Papio_anubis
ENSUAMG00000004433	-	100	46.703	ENSPPYG00000011832	APOBEC3C	96	46.703	Pongo_abelii
ENSUAMG00000004433	-	71	48.062	ENSPCOG00000018072	-	97	48.062	Propithecus_coquereli
ENSUAMG00000004433	-	71	47.656	ENSPCOG00000022067	-	97	47.656	Propithecus_coquereli
ENSUAMG00000004433	-	90	63.889	ENSPVAG00000009461	-	67	63.889	Pteropus_vampyrus
ENSUAMG00000004433	-	95	48.619	ENSRBIG00000030834	-	93	48.066	Rhinopithecus_bieti
ENSUAMG00000004433	-	98	46.629	ENSRBIG00000042297	-	93	46.369	Rhinopithecus_bieti
ENSUAMG00000004433	-	100	47.253	ENSRBIG00000030323	-	99	46.703	Rhinopithecus_bieti
ENSUAMG00000004433	-	100	47.514	ENSRROG00000029045	APOBEC3C	96	47.253	Rhinopithecus_roxellana
ENSUAMG00000004433	-	100	47.802	ENSRROG00000028557	-	94	47.802	Rhinopithecus_roxellana
ENSUAMG00000004433	-	98	45.506	ENSRROG00000029996	-	93	45.251	Rhinopithecus_roxellana
ENSUAMG00000004433	-	100	46.703	ENSSBOG00000032780	-	96	46.703	Saimiri_boliviensis_boliviensis
ENSUAMG00000004433	-	100	100.000	ENSUMAG00000014441	-	84	100.000	Ursus_maritimus
ENSUAMG00000004433	-	79	62.329	ENSVVUG00000014628	-	91	62.329	Vulpes_vulpes