EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000004470 (Gene tree)
Gene ID: -
Gene Symbol: RSL1D1
Alias: CSIG|DKFZP564M182|L12|PBK1|UTP30
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 13915 bases
Position: chrLZNR01013576.1:42640-56554
Accession: 24534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000005147	Ribosomal_L1	PF00687.21	4.8e-53	1	1
ENSUAMP00000005242	Ribosomal_L1	PF00687.21	7.9e-53	1	1
ENSUAMP00000005265	Ribosomal_L1	PF00687.21	2.8e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000005983	RSL1D1-203	1188	-	ENSUAMP00000005265	395 (aa)	-	-
ENSUAMT00000005958	RSL1D1-202	1476	-	ENSUAMP00000005242	491 (aa)	-	-
ENSUAMT00000005854	RSL1D1-201	1410	-	ENSUAMP00000005147	469 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000004470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004470	RSL1D1	98	66.667	ENSG00000171490	RSL1D1	100	84.694	Homo_sapiens
ENSUAMG00000004470	RSL1D1	51	50.500	ENSAPOG00000004544	rsl1d1	91	40.157	Acanthochromis_polyacanthus
ENSUAMG00000004470	RSL1D1	100	95.112	ENSAMEG00000009570	RSL1D1	99	95.112	Ailuropoda_melanoleuca
ENSUAMG00000004470	RSL1D1	52	46.377	ENSACIG00000006608	rsl1d1	74	44.856	Amphilophus_citrinellus
ENSUAMG00000004470	RSL1D1	51	50.000	ENSAOCG00000001548	rsl1d1	89	40.857	Amphiprion_ocellaris
ENSUAMG00000004470	RSL1D1	51	50.000	ENSAPEG00000003334	rsl1d1	89	40.857	Amphiprion_percula
ENSUAMG00000004470	RSL1D1	51	50.500	ENSATEG00000009247	rsl1d1	93	40.000	Anabas_testudineus
ENSUAMG00000004470	RSL1D1	96	37.674	ENSAPLG00000004451	RSL1D1	99	40.645	Anas_platyrhynchos
ENSUAMG00000004470	RSL1D1	99	62.398	ENSANAG00000026520	-	94	61.028	Aotus_nancymaae
ENSUAMG00000004470	RSL1D1	100	63.083	ENSANAG00000028185	-	94	63.011	Aotus_nancymaae
ENSUAMG00000004470	RSL1D1	100	67.140	ENSANAG00000034590	-	94	67.312	Aotus_nancymaae
ENSUAMG00000004470	RSL1D1	74	43.667	ENSACLG00000017535	rsl1d1	91	42.817	Astatotilapia_calliptera
ENSUAMG00000004470	RSL1D1	84	39.157	ENSAMXG00000008624	rsl1d1	97	37.696	Astyanax_mexicanus
ENSUAMG00000004470	RSL1D1	100	70.876	ENSBTAG00000014588	RSL1D1	95	71.828	Bos_taurus
ENSUAMG00000004470	RSL1D1	95	69.612	ENSCJAG00000008375	-	96	68.602	Callithrix_jacchus
ENSUAMG00000004470	RSL1D1	95	69.397	ENSCJAG00000042606	-	96	67.888	Callithrix_jacchus
ENSUAMG00000004470	RSL1D1	100	84.929	ENSCAFG00000018865	RSL1D1	95	85.408	Canis_familiaris
ENSUAMG00000004470	RSL1D1	100	84.114	ENSCAFG00020024488	-	95	84.335	Canis_lupus_dingo
ENSUAMG00000004470	RSL1D1	88	67.749	ENSCAFG00020002457	-	89	67.749	Canis_lupus_dingo
ENSUAMG00000004470	RSL1D1	100	65.580	ENSCHIG00000009867	-	94	67.593	Capra_hircus
ENSUAMG00000004470	RSL1D1	99	71.138	ENSCHIG00000018658	-	94	71.674	Capra_hircus
ENSUAMG00000004470	RSL1D1	100	63.895	ENSTSYG00000009276	RSL1D1	94	64.871	Carlito_syrichta
ENSUAMG00000004470	RSL1D1	99	61.837	ENSCPOG00000010630	RSL1D1	95	63.226	Cavia_porcellus
ENSUAMG00000004470	RSL1D1	100	58.621	ENSCCAG00000025197	-	79	73.878	Cebus_capucinus
ENSUAMG00000004470	RSL1D1	100	67.140	ENSCCAG00000017391	-	94	67.026	Cebus_capucinus
ENSUAMG00000004470	RSL1D1	99	61.602	ENSCCAG00000031641	-	91	61.290	Cebus_capucinus
ENSUAMG00000004470	RSL1D1	95	58.562	ENSCATG00000031153	RSL1D1	92	61.823	Cercocebus_atys
ENSUAMG00000004470	RSL1D1	100	63.340	ENSCLAG00000010975	RSL1D1	95	64.807	Chinchilla_lanigera
ENSUAMG00000004470	RSL1D1	96	66.596	ENSCSAG00000008255	RSL1D1	94	67.312	Chlorocebus_sabaeus
ENSUAMG00000004470	RSL1D1	74	77.612	ENSCHOG00000010827	RSL1D1	74	74.800	Choloepus_hoffmanni
ENSUAMG00000004470	RSL1D1	51	53.500	ENSCPBG00000004564	RSL1D1	92	52.657	Chrysemys_picta_bellii
ENSUAMG00000004470	RSL1D1	50	34.171	ENSCING00000011810	-	100	34.649	Ciona_intestinalis
ENSUAMG00000004470	RSL1D1	62	31.392	ENSCSAVG00000011797	-	69	34.188	Ciona_savignyi
ENSUAMG00000004470	RSL1D1	96	66.242	ENSCANG00000029202	RSL1D1	94	66.882	Colobus_angolensis_palliatus
ENSUAMG00000004470	RSL1D1	99	53.469	ENSCGRG00001014989	Rsl1d1	99	54.624	Cricetulus_griseus_chok1gshd
ENSUAMG00000004470	RSL1D1	99	53.469	ENSCGRG00000001905	Rsl1d1	99	54.624	Cricetulus_griseus_crigri
ENSUAMG00000004470	RSL1D1	51	49.500	ENSCSEG00000019693	rsl1d1	90	39.722	Cynoglossus_semilaevis
ENSUAMG00000004470	RSL1D1	56	46.154	ENSCVAG00000000672	rsl1d1	89	41.076	Cyprinodon_variegatus
ENSUAMG00000004470	RSL1D1	51	46.500	ENSDARG00000055868	rsl1d1	85	38.571	Danio_rerio
ENSUAMG00000004470	RSL1D1	77	44.311	ENSDNOG00000047567	-	99	50.291	Dasypus_novemcinctus
ENSUAMG00000004470	RSL1D1	97	62.474	ENSDNOG00000004601	-	92	64.783	Dasypus_novemcinctus
ENSUAMG00000004470	RSL1D1	97	62.268	ENSDNOG00000040779	-	93	65.217	Dasypus_novemcinctus
ENSUAMG00000004470	RSL1D1	98	50.000	ENSDORG00000013432	-	73	75.936	Dipodomys_ordii
ENSUAMG00000004470	RSL1D1	51	46.766	ENSEBUG00000005400	-	87	36.528	Eptatretus_burgeri
ENSUAMG00000004470	RSL1D1	99	75.670	ENSEASG00005011499	RSL1D1	93	76.304	Equus_asinus_asinus
ENSUAMG00000004470	RSL1D1	99	76.289	ENSECAG00000025036	RSL1D1	93	76.739	Equus_caballus
ENSUAMG00000004470	RSL1D1	74	81.720	ENSEEUG00000015569	-	80	81.720	Erinaceus_europaeus
ENSUAMG00000004470	RSL1D1	82	40.867	ENSELUG00000019243	rsl1d1	95	40.669	Esox_lucius
ENSUAMG00000004470	RSL1D1	100	83.096	ENSFCAG00000010114	RSL1D1	100	83.096	Felis_catus
ENSUAMG00000004470	RSL1D1	93	39.331	ENSFALG00000003869	RSL1D1	93	40.430	Ficedula_albicollis
ENSUAMG00000004470	RSL1D1	100	59.267	ENSFDAG00000011414	RSL1D1	95	60.538	Fukomys_damarensis
ENSUAMG00000004470	RSL1D1	51	49.000	ENSFHEG00000017235	rsl1d1	88	39.106	Fundulus_heteroclitus
ENSUAMG00000004470	RSL1D1	51	46.835	ENSGMOG00000013048	rsl1d1	84	46.862	Gadus_morhua
ENSUAMG00000004470	RSL1D1	51	52.521	ENSGALG00000033690	RSL1D1	99	40.523	Gallus_gallus
ENSUAMG00000004470	RSL1D1	51	49.000	ENSGAFG00000020794	rsl1d1	95	38.539	Gambusia_affinis
ENSUAMG00000004470	RSL1D1	82	39.692	ENSGACG00000004483	rsl1d1	90	40.166	Gasterosteus_aculeatus
ENSUAMG00000004470	RSL1D1	95	65.236	ENSGGOG00000013463	RSL1D1	94	66.022	Gorilla_gorilla
ENSUAMG00000004470	RSL1D1	74	42.712	ENSHBUG00000001551	rsl1d1	90	41.429	Haplochromis_burtoni
ENSUAMG00000004470	RSL1D1	100	58.621	ENSHGLG00000006774	RSL1D1	95	60.633	Heterocephalus_glaber_female
ENSUAMG00000004470	RSL1D1	100	58.621	ENSHGLG00100017781	RSL1D1	95	60.633	Heterocephalus_glaber_male
ENSUAMG00000004470	RSL1D1	52	44.878	ENSHCOG00000015208	rsl1d1	84	39.818	Hippocampus_comes
ENSUAMG00000004470	RSL1D1	51	49.000	ENSIPUG00000001677	rsl1d1	94	40.470	Ictalurus_punctatus
ENSUAMG00000004470	RSL1D1	97	58.392	ENSSTOG00000015400	RSL1D1	99	61.772	Ictidomys_tridecemlineatus
ENSUAMG00000004470	RSL1D1	92	53.642	ENSJJAG00000012115	Rsl1d1	94	53.647	Jaculus_jaculus
ENSUAMG00000004470	RSL1D1	51	48.500	ENSKMAG00000021908	rsl1d1	97	39.737	Kryptolebias_marmoratus
ENSUAMG00000004470	RSL1D1	51	48.000	ENSLBEG00000001076	rsl1d1	95	37.913	Labrus_bergylta
ENSUAMG00000004470	RSL1D1	91	37.955	ENSLOCG00000007416	rsl1d1	96	39.367	Lepisosteus_oculatus
ENSUAMG00000004470	RSL1D1	97	62.716	ENSLAFG00000013664	RSL1D1	98	62.423	Loxodonta_africana
ENSUAMG00000004470	RSL1D1	93	66.449	ENSMFAG00000037288	RSL1D1	94	68.103	Macaca_fascicularis
ENSUAMG00000004470	RSL1D1	97	65.833	ENSMMUG00000019632	RSL1D1	99	82.692	Macaca_mulatta
ENSUAMG00000004470	RSL1D1	93	66.231	ENSMNEG00000044196	RSL1D1	94	67.888	Macaca_nemestrina
ENSUAMG00000004470	RSL1D1	93	66.228	ENSMLEG00000042058	RSL1D1	94	67.457	Mandrillus_leucophaeus
ENSUAMG00000004470	RSL1D1	74	44.407	ENSMAMG00000004385	rsl1d1	90	42.938	Mastacembelus_armatus
ENSUAMG00000004470	RSL1D1	52	50.725	ENSMZEG00005007150	rsl1d1	91	42.535	Maylandia_zebra
ENSUAMG00000004470	RSL1D1	97	40.049	ENSMGAG00000000863	RSL1D1	98	41.060	Meleagris_gallopavo
ENSUAMG00000004470	RSL1D1	100	60.404	ENSMICG00000008229	RSL1D1	94	62.179	Microcebus_murinus
ENSUAMG00000004470	RSL1D1	96	52.417	ENSMOCG00000017724	Rsl1d1	96	54.566	Microtus_ochrogaster
ENSUAMG00000004470	RSL1D1	50	48.241	ENSMMOG00000003730	rsl1d1	79	46.218	Mola_mola
ENSUAMG00000004470	RSL1D1	87	41.292	ENSMODG00000029494	-	83	42.010	Monodelphis_domestica
ENSUAMG00000004470	RSL1D1	97	45.199	ENSMODG00000004625	-	100	46.882	Monodelphis_domestica
ENSUAMG00000004470	RSL1D1	52	49.758	ENSMALG00000009531	rsl1d1	90	42.493	Monopterus_albus
ENSUAMG00000004470	RSL1D1	98	55.094	ENSMUSG00000005846	Rsl1d1	91	56.941	Mus_musculus
ENSUAMG00000004470	RSL1D1	99	53.939	MGP_PahariEiJ_G0016164	Rsl1d1	93	56.782	Mus_pahari
ENSUAMG00000004470	RSL1D1	98	55.301	MGP_SPRETEiJ_G0021352	Rsl1d1	91	57.176	Mus_spretus
ENSUAMG00000004470	RSL1D1	100	87.726	ENSMPUG00000014548	RSL1D1	100	87.726	Mustela_putorius_furo
ENSUAMG00000004470	RSL1D1	100	71.142	ENSMLUG00000000784	RSL1D1	93	72.629	Myotis_lucifugus
ENSUAMG00000004470	RSL1D1	94	60.652	ENSNGAG00000013578	-	98	61.233	Nannospalax_galili
ENSUAMG00000004470	RSL1D1	93	61.269	ENSNGAG00000009086	-	92	60.444	Nannospalax_galili
ENSUAMG00000004470	RSL1D1	52	50.242	ENSNBRG00000002777	rsl1d1	90	42.571	Neolamprologus_brichardi
ENSUAMG00000004470	RSL1D1	71	66.193	ENSNLEG00000012149	-	91	65.341	Nomascus_leucogenys
ENSUAMG00000004470	RSL1D1	96	67.865	ENSNLEG00000010196	-	94	67.742	Nomascus_leucogenys
ENSUAMG00000004470	RSL1D1	100	60.446	ENSOPRG00000004442	-	94	60.776	Ochotona_princeps
ENSUAMG00000004470	RSL1D1	52	50.242	ENSONIG00000019757	rsl1d1	94	42.857	Oreochromis_niloticus
ENSUAMG00000004470	RSL1D1	87	44.470	ENSOANG00000009408	-	99	43.088	Ornithorhynchus_anatinus
ENSUAMG00000004470	RSL1D1	97	64.211	ENSOCUG00000004751	RSL1D1	95	64.592	Oryctolagus_cuniculus
ENSUAMG00000004470	RSL1D1	50	47.716	ENSORLG00000002877	rsl1d1	94	38.133	Oryzias_latipes
ENSUAMG00000004470	RSL1D1	89	38.000	ENSORLG00020006636	rsl1d1	98	38.046	Oryzias_latipes_hni
ENSUAMG00000004470	RSL1D1	89	38.286	ENSORLG00015005427	rsl1d1	98	38.303	Oryzias_latipes_hsok
ENSUAMG00000004470	RSL1D1	54	44.488	ENSOMEG00000008036	rsl1d1	88	38.375	Oryzias_melastigma
ENSUAMG00000004470	RSL1D1	100	65.795	ENSOGAG00000015151	RSL1D1	94	65.032	Otolemur_garnettii
ENSUAMG00000004470	RSL1D1	100	71.894	ENSOARG00000006923	RSL1D1	95	72.473	Ovis_aries
ENSUAMG00000004470	RSL1D1	98	66.667	ENSPPAG00000039716	RSL1D1	94	66.882	Pan_paniscus
ENSUAMG00000004470	RSL1D1	100	83.299	ENSPPRG00000005220	RSL1D1	95	83.047	Panthera_pardus
ENSUAMG00000004470	RSL1D1	98	78.794	ENSPTIG00000005526	RSL1D1	94	81.739	Panthera_tigris_altaica
ENSUAMG00000004470	RSL1D1	98	66.458	ENSPTRG00000007777	RSL1D1	94	66.667	Pan_troglodytes
ENSUAMG00000004470	RSL1D1	93	66.447	ENSPANG00000023073	RSL1D1	94	67.888	Papio_anubis
ENSUAMG00000004470	RSL1D1	51	44.500	ENSPKIG00000022687	rsl1d1	98	34.579	Paramormyrops_kingsleyae
ENSUAMG00000004470	RSL1D1	84	39.763	ENSPSIG00000011642	RSL1D1	98	40.501	Pelodiscus_sinensis
ENSUAMG00000004470	RSL1D1	51	49.500	ENSPMGG00000022261	rsl1d1	98	40.000	Periophthalmus_magnuspinnatus
ENSUAMG00000004470	RSL1D1	99	56.212	ENSPEMG00000009523	Rsl1d1	94	56.982	Peromyscus_maniculatus_bairdii
ENSUAMG00000004470	RSL1D1	89	46.556	ENSPCIG00000026851	-	93	48.608	Phascolarctos_cinereus
ENSUAMG00000004470	RSL1D1	70	41.449	ENSPFOG00000005017	rsl1d1	92	39.458	Poecilia_formosa
ENSUAMG00000004470	RSL1D1	57	43.885	ENSPLAG00000000482	rsl1d1	85	37.209	Poecilia_latipinna
ENSUAMG00000004470	RSL1D1	51	49.000	ENSPMEG00000007032	rsl1d1	93	39.481	Poecilia_mexicana
ENSUAMG00000004470	RSL1D1	52	49.020	ENSPREG00000016619	rsl1d1	76	41.768	Poecilia_reticulata
ENSUAMG00000004470	RSL1D1	95	67.527	ENSPPYG00000007112	RSL1D1	94	66.882	Pongo_abelii
ENSUAMG00000004470	RSL1D1	95	57.143	ENSPPYG00000019335	-	94	58.565	Pongo_abelii
ENSUAMG00000004470	RSL1D1	76	79.032	ENSPCAG00000011264	-	76	75.758	Procavia_capensis
ENSUAMG00000004470	RSL1D1	74	60.606	ENSPCOG00000022456	RSL1D1	92	61.667	Propithecus_coquereli
ENSUAMG00000004470	RSL1D1	100	73.931	ENSPVAG00000005014	RSL1D1	95	74.624	Pteropus_vampyrus
ENSUAMG00000004470	RSL1D1	52	50.725	ENSPNYG00000002850	rsl1d1	90	43.466	Pundamilia_nyererei
ENSUAMG00000004470	RSL1D1	80	38.629	ENSPNAG00000011848	rsl1d1	89	40.057	Pygocentrus_nattereri
ENSUAMG00000004470	RSL1D1	96	55.949	ENSRNOG00000048608	Rsl1d1l1	91	57.944	Rattus_norvegicus
ENSUAMG00000004470	RSL1D1	96	55.949	ENSRNOG00000061236	LOC108348298	91	57.944	Rattus_norvegicus
ENSUAMG00000004470	RSL1D1	80	51.735	ENSRNOG00000032439	Rsl1d1	55	49.713	Rattus_norvegicus
ENSUAMG00000004470	RSL1D1	97	66.946	ENSRBIG00000030317	RSL1D1	94	67.742	Rhinopithecus_bieti
ENSUAMG00000004470	RSL1D1	98	66.944	ENSRROG00000033658	RSL1D1	94	67.742	Rhinopithecus_roxellana
ENSUAMG00000004470	RSL1D1	100	63.340	ENSSBOG00000028384	-	95	64.224	Saimiri_boliviensis_boliviensis
ENSUAMG00000004470	RSL1D1	100	67.546	ENSSBOG00000035910	-	94	68.319	Saimiri_boliviensis_boliviensis
ENSUAMG00000004470	RSL1D1	100	51.318	ENSSBOG00000029329	-	88	56.842	Saimiri_boliviensis_boliviensis
ENSUAMG00000004470	RSL1D1	51	51.000	ENSSFOG00015011354	rsl1d1	69	50.417	Scleropages_formosus
ENSUAMG00000004470	RSL1D1	73	39.792	ENSSMAG00000007957	rsl1d1	94	36.896	Scophthalmus_maximus
ENSUAMG00000004470	RSL1D1	51	49.000	ENSSDUG00000008447	rsl1d1	83	41.311	Seriola_dumerili
ENSUAMG00000004470	RSL1D1	51	50.500	ENSSLDG00000008293	rsl1d1	89	42.450	Seriola_lalandi_dorsalis
ENSUAMG00000004470	RSL1D1	94	41.860	ENSSPUG00000007525	RSL1D1	98	41.438	Sphenodon_punctatus
ENSUAMG00000004470	RSL1D1	51	51.000	ENSSPAG00000009755	rsl1d1	98	39.951	Stegastes_partitus
ENSUAMG00000004470	RSL1D1	95	72.059	ENSSSCG00000023984	RSL1D1	95	72.059	Sus_scrofa
ENSUAMG00000004470	RSL1D1	51	53.782	ENSTGUG00000005174	RSL1D1	99	53.469	Taeniopygia_guttata
ENSUAMG00000004470	RSL1D1	51	48.500	ENSTRUG00000016970	rsl1d1	90	40.720	Takifugu_rubripes
ENSUAMG00000004470	RSL1D1	51	47.500	ENSTNIG00000012925	rsl1d1	96	38.298	Tetraodon_nigroviridis
ENSUAMG00000004470	RSL1D1	93	52.463	ENSTBEG00000014678	RSL1D1	99	59.951	Tupaia_belangeri
ENSUAMG00000004470	RSL1D1	95	73.605	ENSTTRG00000011629	RSL1D1	95	72.532	Tursiops_truncatus
ENSUAMG00000004470	RSL1D1	87	92.140	ENSUMAG00000003994	RSL1D1	100	92.140	Ursus_maritimus
ENSUAMG00000004470	RSL1D1	99	70.798	ENSVVUG00000024962	-	99	71.069	Vulpes_vulpes
ENSUAMG00000004470	RSL1D1	100	85.743	ENSVVUG00000018170	-	95	86.266	Vulpes_vulpes
ENSUAMG00000004470	RSL1D1	95	42.500	ENSXETG00000033365	-	97	43.430	Xenopus_tropicalis
ENSUAMG00000004470	RSL1D1	55	46.094	ENSXMAG00000025111	rsl1d1	68	47.660	Xiphophorus_maculatus