EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000004579 (Gene tree)
Gene ID: -
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 10062 bases
Position: chrLZNR01009681.1:143947-154008
Accession: 14099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000005140	Exo_endo_phos	PF03372.23	6.8e-22	1	1
ENSUAMP00000005177	Exo_endo_phos	PF03372.23	7.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000005887	CNOT6-202	1497	-	ENSUAMP00000005177	498 (aa)	-	-
ENSUAMT00000005845	CNOT6-201	2464	-	ENSUAMP00000005140	487 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000004579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000004579	CNOT6	88	75.758	ENSUAMG00000026982	CNOT6L	77	75.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004579	CNOT6	88	97.669	ENSG00000113300	CNOT6	84	95.050	Homo_sapiens
ENSUAMG00000004579	CNOT6	99	76.389	ENSAPOG00000009994	cnot6b	90	76.389	Acanthochromis_polyacanthus
ENSUAMG00000004579	CNOT6	88	100.000	ENSAMEG00000000949	CNOT6	76	100.000	Ailuropoda_melanoleuca
ENSUAMG00000004579	CNOT6	99	75.397	ENSACIG00000016566	cnot6b	90	75.397	Amphilophus_citrinellus
ENSUAMG00000004579	CNOT6	99	76.389	ENSAOCG00000006893	cnot6b	90	76.389	Amphiprion_ocellaris
ENSUAMG00000004579	CNOT6	99	76.389	ENSAPEG00000016949	cnot6b	90	76.389	Amphiprion_percula
ENSUAMG00000004579	CNOT6	99	74.405	ENSATEG00000007862	cnot6b	90	74.405	Anabas_testudineus
ENSUAMG00000004579	CNOT6	88	96.270	ENSAPLG00000012715	CNOT6	77	96.270	Anas_platyrhynchos
ENSUAMG00000004579	CNOT6	88	92.541	ENSACAG00000016548	CNOT6	77	92.541	Anolis_carolinensis
ENSUAMG00000004579	CNOT6	88	98.368	ENSANAG00000030436	CNOT6	74	98.368	Aotus_nancymaae
ENSUAMG00000004579	CNOT6	99	74.206	ENSACLG00000008279	cnot6b	90	75.198	Astatotilapia_calliptera
ENSUAMG00000004579	CNOT6	99	75.149	ENSAMXG00000034694	cnot6b	90	75.149	Astyanax_mexicanus
ENSUAMG00000004579	CNOT6	99	76.143	ENSAMXG00000019140	cnot6a	77	85.116	Astyanax_mexicanus
ENSUAMG00000004579	CNOT6	88	99.068	ENSBTAG00000017362	CNOT6	77	99.068	Bos_taurus
ENSUAMG00000004579	CNOT6	88	98.368	ENSCJAG00000009795	CNOT6	77	98.368	Callithrix_jacchus
ENSUAMG00000004579	CNOT6	88	99.767	ENSCAFG00000000464	CNOT6	77	99.767	Canis_familiaris
ENSUAMG00000004579	CNOT6	88	99.767	ENSCAFG00020002441	CNOT6	77	99.767	Canis_lupus_dingo
ENSUAMG00000004579	CNOT6	88	98.834	ENSCHIG00000019100	CNOT6	77	98.834	Capra_hircus
ENSUAMG00000004579	CNOT6	88	96.037	ENSTSYG00000003982	CNOT6	77	96.037	Carlito_syrichta
ENSUAMG00000004579	CNOT6	95	87.419	ENSCPOG00000035657	CNOT6	81	87.419	Cavia_porcellus
ENSUAMG00000004579	CNOT6	91	97.732	ENSCCAG00000033670	CNOT6	82	97.732	Cebus_capucinus
ENSUAMG00000004579	CNOT6	88	97.902	ENSCATG00000042014	CNOT6	77	97.902	Cercocebus_atys
ENSUAMG00000004579	CNOT6	95	91.974	ENSCLAG00000010489	CNOT6	82	91.974	Chinchilla_lanigera
ENSUAMG00000004579	CNOT6	88	97.902	ENSCSAG00000008165	CNOT6	77	97.902	Chlorocebus_sabaeus
ENSUAMG00000004579	CNOT6	88	97.203	ENSCHOG00000009680	CNOT6	77	97.203	Choloepus_hoffmanni
ENSUAMG00000004579	CNOT6	88	95.571	ENSCPBG00000008908	CNOT6	77	95.571	Chrysemys_picta_bellii
ENSUAMG00000004579	CNOT6	88	98.135	ENSCANG00000026756	CNOT6	77	98.135	Colobus_angolensis_palliatus
ENSUAMG00000004579	CNOT6	88	96.737	ENSCGRG00001011452	Cnot6	77	96.737	Cricetulus_griseus_chok1gshd
ENSUAMG00000004579	CNOT6	88	95.105	ENSCGRG00000010407	Cnot6	77	95.105	Cricetulus_griseus_crigri
ENSUAMG00000004579	CNOT6	99	75.397	ENSCSEG00000010939	cnot6b	90	75.397	Cynoglossus_semilaevis
ENSUAMG00000004579	CNOT6	99	74.950	ENSCVAG00000010538	cnot6b	90	74.950	Cyprinodon_variegatus
ENSUAMG00000004579	CNOT6	99	75.149	ENSDARG00000101072	cnot6b	90	75.149	Danio_rerio
ENSUAMG00000004579	CNOT6	88	85.349	ENSDARG00000008255	cnot6a	90	75.992	Danio_rerio
ENSUAMG00000004579	CNOT6	88	97.669	ENSDNOG00000041644	CNOT6	77	97.669	Dasypus_novemcinctus
ENSUAMG00000004579	CNOT6	88	84.615	ENSDORG00000001708	Cnot6	76	84.615	Dipodomys_ordii
ENSUAMG00000004579	CNOT6	88	79.070	ENSETEG00000006975	CNOT6	77	79.070	Echinops_telfairi
ENSUAMG00000004579	CNOT6	88	98.135	ENSEASG00005012794	-	77	98.135	Equus_asinus_asinus
ENSUAMG00000004579	CNOT6	88	92.308	ENSEASG00005012957	-	85	92.308	Equus_asinus_asinus
ENSUAMG00000004579	CNOT6	88	90.909	ENSECAG00000012704	-	76	90.909	Equus_caballus
ENSUAMG00000004579	CNOT6	88	98.834	ENSECAG00000019325	CNOT6	88	93.556	Equus_caballus
ENSUAMG00000004579	CNOT6	88	97.669	ENSEEUG00000015382	CNOT6	77	97.669	Erinaceus_europaeus
ENSUAMG00000004579	CNOT6	88	79.535	ENSELUG00000024580	cnot6a	77	79.535	Esox_lucius
ENSUAMG00000004579	CNOT6	99	73.242	ENSELUG00000015981	cnot6b	77	81.777	Esox_lucius
ENSUAMG00000004579	CNOT6	88	99.534	ENSFCAG00000001881	CNOT6	77	99.534	Felis_catus
ENSUAMG00000004579	CNOT6	88	96.270	ENSFALG00000007699	CNOT6	77	96.270	Ficedula_albicollis
ENSUAMG00000004579	CNOT6	88	96.737	ENSFDAG00000001999	CNOT6	77	96.737	Fukomys_damarensis
ENSUAMG00000004579	CNOT6	65	83.386	ENSFHEG00000013756	cnot6b	84	83.386	Fundulus_heteroclitus
ENSUAMG00000004579	CNOT6	94	74.262	ENSGMOG00000009767	cnot6b	88	74.262	Gadus_morhua
ENSUAMG00000004579	CNOT6	88	96.270	ENSGALG00000034316	CNOT6	77	96.270	Gallus_gallus
ENSUAMG00000004579	CNOT6	99	75.149	ENSGAFG00000008525	cnot6b	90	75.149	Gambusia_affinis
ENSUAMG00000004579	CNOT6	94	72.152	ENSGACG00000018046	cnot6b	75	81.297	Gasterosteus_aculeatus
ENSUAMG00000004579	CNOT6	88	75.291	ENSGAGG00000012176	CNOT6	75	75.291	Gopherus_agassizii
ENSUAMG00000004579	CNOT6	88	97.669	ENSGGOG00000003675	CNOT6	77	97.669	Gorilla_gorilla
ENSUAMG00000004579	CNOT6	99	74.405	ENSHBUG00000002819	cnot6b	90	75.397	Haplochromis_burtoni
ENSUAMG00000004579	CNOT6	95	92.191	ENSHGLG00000017756	CNOT6	77	97.203	Heterocephalus_glaber_female
ENSUAMG00000004579	CNOT6	95	92.191	ENSHGLG00100005747	CNOT6	77	97.203	Heterocephalus_glaber_male
ENSUAMG00000004579	CNOT6	99	72.817	ENSHCOG00000016176	cnot6b	90	73.810	Hippocampus_comes
ENSUAMG00000004579	CNOT6	99	74.950	ENSIPUG00000019831	cnot6a	77	83.721	Ictalurus_punctatus
ENSUAMG00000004579	CNOT6	99	73.757	ENSIPUG00000017482	cnot6b	77	82.093	Ictalurus_punctatus
ENSUAMG00000004579	CNOT6	88	97.669	ENSSTOG00000002803	CNOT6	77	97.669	Ictidomys_tridecemlineatus
ENSUAMG00000004579	CNOT6	99	85.657	ENSJJAG00000012296	Cnot6	77	96.270	Jaculus_jaculus
ENSUAMG00000004579	CNOT6	99	76.143	ENSKMAG00000004640	cnot6b	90	76.143	Kryptolebias_marmoratus
ENSUAMG00000004579	CNOT6	99	73.810	ENSLBEG00000027917	cnot6b	90	74.802	Labrus_bergylta
ENSUAMG00000004579	CNOT6	88	89.302	ENSLOCG00000010102	cnot6b	89	79.920	Lepisosteus_oculatus
ENSUAMG00000004579	CNOT6	88	97.902	ENSLAFG00000016742	CNOT6	77	97.902	Loxodonta_africana
ENSUAMG00000004579	CNOT6	88	97.902	ENSMFAG00000030867	CNOT6	77	97.902	Macaca_fascicularis
ENSUAMG00000004579	CNOT6	88	97.902	ENSMMUG00000018690	CNOT6	77	97.902	Macaca_mulatta
ENSUAMG00000004579	CNOT6	88	97.902	ENSMNEG00000038565	CNOT6	77	97.902	Macaca_nemestrina
ENSUAMG00000004579	CNOT6	88	97.902	ENSMLEG00000010555	CNOT6	77	97.902	Mandrillus_leucophaeus
ENSUAMG00000004579	CNOT6	99	76.587	ENSMAMG00000007515	cnot6b	90	76.587	Mastacembelus_armatus
ENSUAMG00000004579	CNOT6	99	74.206	ENSMZEG00005012899	cnot6b	90	75.198	Maylandia_zebra
ENSUAMG00000004579	CNOT6	88	98.135	ENSMAUG00000019798	Cnot6	77	98.135	Mesocricetus_auratus
ENSUAMG00000004579	CNOT6	88	95.571	ENSMICG00000013018	-	77	95.571	Microcebus_murinus
ENSUAMG00000004579	CNOT6	88	85.082	ENSMICG00000028378	-	77	85.082	Microcebus_murinus
ENSUAMG00000004579	CNOT6	88	97.902	ENSMOCG00000021662	Cnot6	77	97.902	Microtus_ochrogaster
ENSUAMG00000004579	CNOT6	99	73.559	ENSMMOG00000003227	cnot6b	77	82.093	Mola_mola
ENSUAMG00000004579	CNOT6	88	96.503	ENSMODG00000003979	CNOT6	77	96.503	Monodelphis_domestica
ENSUAMG00000004579	CNOT6	99	76.190	ENSMALG00000014251	cnot6b	90	76.190	Monopterus_albus
ENSUAMG00000004579	CNOT6	88	97.902	MGP_CAROLIEiJ_G0016277	Cnot6	77	97.902	Mus_caroli
ENSUAMG00000004579	CNOT6	88	97.902	ENSMUSG00000020362	Cnot6	77	97.902	Mus_musculus
ENSUAMG00000004579	CNOT6	88	97.902	MGP_PahariEiJ_G0017413	Cnot6	77	97.902	Mus_pahari
ENSUAMG00000004579	CNOT6	88	97.902	MGP_SPRETEiJ_G0017122	Cnot6	77	97.902	Mus_spretus
ENSUAMG00000004579	CNOT6	88	99.301	ENSMPUG00000000587	CNOT6	74	99.301	Mustela_putorius_furo
ENSUAMG00000004579	CNOT6	88	96.759	ENSMLUG00000010257	CNOT6	77	96.759	Myotis_lucifugus
ENSUAMG00000004579	CNOT6	88	96.270	ENSNGAG00000008269	Cnot6	77	96.270	Nannospalax_galili
ENSUAMG00000004579	CNOT6	99	74.405	ENSNBRG00000010798	cnot6b	90	75.397	Neolamprologus_brichardi
ENSUAMG00000004579	CNOT6	88	96.037	ENSNLEG00000002322	CNOT6	77	96.037	Nomascus_leucogenys
ENSUAMG00000004579	CNOT6	67	96.262	ENSMEUG00000000025	CNOT6	58	96.262	Notamacropus_eugenii
ENSUAMG00000004579	CNOT6	74	97.251	ENSOPRG00000008244	-	65	97.251	Ochotona_princeps
ENSUAMG00000004579	CNOT6	88	96.037	ENSODEG00000007041	CNOT6	77	96.037	Octodon_degus
ENSUAMG00000004579	CNOT6	72	70.380	ENSONIG00000013027	cnot6b	86	70.380	Oreochromis_niloticus
ENSUAMG00000004579	CNOT6	88	95.338	ENSOANG00000010226	CNOT6	77	95.338	Ornithorhynchus_anatinus
ENSUAMG00000004579	CNOT6	88	96.970	ENSOCUG00000011083	CNOT6	77	96.970	Oryctolagus_cuniculus
ENSUAMG00000004579	CNOT6	99	74.603	ENSORLG00000005059	cnot6b	90	74.603	Oryzias_latipes
ENSUAMG00000004579	CNOT6	99	74.603	ENSORLG00020012784	cnot6b	90	74.603	Oryzias_latipes_hni
ENSUAMG00000004579	CNOT6	99	74.603	ENSORLG00015022658	cnot6b	95	74.603	Oryzias_latipes_hsok
ENSUAMG00000004579	CNOT6	99	74.802	ENSOMEG00000005295	cnot6b	90	74.802	Oryzias_melastigma
ENSUAMG00000004579	CNOT6	88	98.368	ENSOGAG00000032470	CNOT6	82	98.368	Otolemur_garnettii
ENSUAMG00000004579	CNOT6	88	99.068	ENSOARG00000001003	CNOT6	79	99.068	Ovis_aries
ENSUAMG00000004579	CNOT6	88	97.669	ENSPPAG00000032253	CNOT6	77	97.669	Pan_paniscus
ENSUAMG00000004579	CNOT6	88	99.301	ENSPPRG00000011912	CNOT6	77	99.301	Panthera_pardus
ENSUAMG00000004579	CNOT6	88	99.301	ENSPTIG00000016794	CNOT6	77	99.301	Panthera_tigris_altaica
ENSUAMG00000004579	CNOT6	88	97.669	ENSPTRG00000017636	CNOT6	77	97.669	Pan_troglodytes
ENSUAMG00000004579	CNOT6	88	97.902	ENSPANG00000016191	CNOT6	77	97.902	Papio_anubis
ENSUAMG00000004579	CNOT6	99	76.190	ENSPKIG00000021368	cnot6b	90	76.190	Paramormyrops_kingsleyae
ENSUAMG00000004579	CNOT6	88	96.037	ENSPSIG00000017307	CNOT6	79	96.037	Pelodiscus_sinensis
ENSUAMG00000004579	CNOT6	99	75.000	ENSPMGG00000011238	cnot6b	90	75.000	Periophthalmus_magnuspinnatus
ENSUAMG00000004579	CNOT6	88	97.669	ENSPEMG00000000627	Cnot6	77	97.669	Peromyscus_maniculatus_bairdii
ENSUAMG00000004579	CNOT6	88	96.037	ENSPCIG00000020319	CNOT6	76	96.037	Phascolarctos_cinereus
ENSUAMG00000004579	CNOT6	99	74.950	ENSPFOG00000006291	cnot6b	90	74.950	Poecilia_formosa
ENSUAMG00000004579	CNOT6	99	70.974	ENSPLAG00000008266	cnot6b	89	70.974	Poecilia_latipinna
ENSUAMG00000004579	CNOT6	99	75.149	ENSPMEG00000009091	cnot6b	90	75.149	Poecilia_mexicana
ENSUAMG00000004579	CNOT6	99	73.757	ENSPREG00000003713	cnot6b	90	73.757	Poecilia_reticulata
ENSUAMG00000004579	CNOT6	88	97.669	ENSPPYG00000016137	CNOT6	77	97.669	Pongo_abelii
ENSUAMG00000004579	CNOT6	88	98.131	ENSPCOG00000017359	CNOT6	81	98.131	Propithecus_coquereli
ENSUAMG00000004579	CNOT6	83	97.537	ENSPVAG00000003069	CNOT6	73	97.537	Pteropus_vampyrus
ENSUAMG00000004579	CNOT6	99	74.008	ENSPNYG00000000321	cnot6b	90	75.000	Pundamilia_nyererei
ENSUAMG00000004579	CNOT6	99	76.342	ENSPNAG00000029586	cnot6a	77	85.349	Pygocentrus_nattereri
ENSUAMG00000004579	CNOT6	99	75.149	ENSPNAG00000028816	cnot6b	90	75.149	Pygocentrus_nattereri
ENSUAMG00000004579	CNOT6	88	96.503	ENSRNOG00000054891	Cnot6	77	96.503	Rattus_norvegicus
ENSUAMG00000004579	CNOT6	88	97.669	ENSRBIG00000004309	CNOT6	77	97.669	Rhinopithecus_bieti
ENSUAMG00000004579	CNOT6	88	97.669	ENSRROG00000035378	CNOT6	93	97.669	Rhinopithecus_roxellana
ENSUAMG00000004579	CNOT6	88	98.135	ENSSBOG00000030494	CNOT6	77	98.135	Saimiri_boliviensis_boliviensis
ENSUAMG00000004579	CNOT6	88	96.270	ENSSHAG00000017436	CNOT6	77	96.270	Sarcophilus_harrisii
ENSUAMG00000004579	CNOT6	88	86.279	ENSSFOG00015015133	CNOT6	90	77.336	Scleropages_formosus
ENSUAMG00000004579	CNOT6	99	75.149	ENSSFOG00015022383	cnot6a	86	75.149	Scleropages_formosus
ENSUAMG00000004579	CNOT6	99	74.405	ENSSMAG00000003084	cnot6b	90	74.405	Scophthalmus_maximus
ENSUAMG00000004579	CNOT6	99	75.992	ENSSDUG00000004151	cnot6b	90	75.992	Seriola_dumerili
ENSUAMG00000004579	CNOT6	99	75.198	ENSSLDG00000004448	cnot6b	90	76.190	Seriola_lalandi_dorsalis
ENSUAMG00000004579	CNOT6	74	77.654	ENSSARG00000012650	-	100	77.654	Sorex_araneus
ENSUAMG00000004579	CNOT6	88	94.639	ENSSPUG00000007893	CNOT6	77	94.639	Sphenodon_punctatus
ENSUAMG00000004579	CNOT6	99	76.190	ENSSPAG00000000149	cnot6b	90	76.190	Stegastes_partitus
ENSUAMG00000004579	CNOT6	88	98.834	ENSSSCG00000014009	CNOT6	93	98.834	Sus_scrofa
ENSUAMG00000004579	CNOT6	88	95.804	ENSTGUG00000001119	CNOT6	77	95.804	Taeniopygia_guttata
ENSUAMG00000004579	CNOT6	99	73.307	ENSTRUG00000002818	cnot6b	90	73.307	Takifugu_rubripes
ENSUAMG00000004579	CNOT6	99	73.705	ENSTNIG00000004443	cnot6b	89	73.705	Tetraodon_nigroviridis
ENSUAMG00000004579	CNOT6	62	69.667	ENSTBEG00000017094	-	62	69.667	Tupaia_belangeri
ENSUAMG00000004579	CNOT6	88	99.068	ENSTTRG00000009363	CNOT6	77	99.068	Tursiops_truncatus
ENSUAMG00000004579	CNOT6	88	93.860	ENSUMAG00000024577	CNOT6	78	93.860	Ursus_maritimus
ENSUAMG00000004579	CNOT6	88	97.430	ENSVPAG00000003593	CNOT6	77	97.430	Vicugna_pacos
ENSUAMG00000004579	CNOT6	88	99.767	ENSVVUG00000026940	CNOT6	77	99.767	Vulpes_vulpes
ENSUAMG00000004579	CNOT6	99	71.372	ENSXCOG00000003360	cnot6b	89	71.372	Xiphophorus_couchianus
ENSUAMG00000004579	CNOT6	99	75.149	ENSXMAG00000008730	cnot6b	90	75.149	Xiphophorus_maculatus