EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000004668 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX3
Alias: FOX-3|HRNBP3|NeuN
Full Name: RNA binding fox-1 homolog 3
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 23825 bases
Position: chrLZNR01001493.1:62845-86669
Accession: 27097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000005211	Fox-1_C	PF12414.8	1.7e-44	1	1
ENSUAMP00000005211	RRM_1	PF00076.22	6.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000005923	RBFOX3-201	2473	-	ENSUAMP00000005211	312 (aa)	-	UPI00059AE373

Gene Model

Click here to download ENSUAMG00000004668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000004668	RBFOX3	100	66.358	ENSUAMG00000024633	RBFOX1	84	65.696
ENSUAMG00000004668	RBFOX3	96	60.694	ENSUAMG00000010612	RBFOX2	86	58.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004668	RBFOX3	100	97.756	ENSG00000167281	RBFOX3	100	97.756	Homo_sapiens
ENSUAMG00000004668	RBFOX3	93	70.946	ENSAPOG00000015658	-	89	67.419	Acanthochromis_polyacanthus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSAPOG00000021630	rbfox3b	81	80.000	Acanthochromis_polyacanthus
ENSUAMG00000004668	RBFOX3	100	94.545	ENSAMEG00000014170	RBFOX3	84	94.545	Ailuropoda_melanoleuca
ENSUAMG00000004668	RBFOX3	100	78.344	ENSACIG00000010817	rbfox3b	94	75.333	Amphilophus_citrinellus
ENSUAMG00000004668	RBFOX3	95	69.085	ENSACIG00000003768	-	71	73.643	Amphilophus_citrinellus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSAOCG00000012358	rbfox3b	81	80.000	Amphiprion_ocellaris
ENSUAMG00000004668	RBFOX3	95	77.333	ENSAOCG00000010786	-	79	76.000	Amphiprion_ocellaris
ENSUAMG00000004668	RBFOX3	100	72.930	ENSAPEG00000019081	rbfox3b	79	70.000	Amphiprion_percula
ENSUAMG00000004668	RBFOX3	95	71.517	ENSAPEG00000015891	-	79	70.497	Amphiprion_percula
ENSUAMG00000004668	RBFOX3	100	72.965	ENSATEG00000019945	rbfox3b	95	73.030	Anabas_testudineus
ENSUAMG00000004668	RBFOX3	95	77.741	ENSATEG00000023101	-	92	77.076	Anabas_testudineus
ENSUAMG00000004668	RBFOX3	100	90.127	ENSACAG00000016093	RBFOX3	83	90.970	Anolis_carolinensis
ENSUAMG00000004668	RBFOX3	100	96.795	ENSANAG00000023457	RBFOX3	100	96.795	Aotus_nancymaae
ENSUAMG00000004668	RBFOX3	100	83.121	ENSACLG00000020011	rbfox3b	95	82.333	Astatotilapia_calliptera
ENSUAMG00000004668	RBFOX3	100	80.063	ENSACLG00000025552	-	81	80.731	Astatotilapia_calliptera
ENSUAMG00000004668	RBFOX3	100	76.825	ENSAMXG00000042841	rbfox3b	85	74.000	Astyanax_mexicanus
ENSUAMG00000004668	RBFOX3	95	81.188	ENSAMXG00000037246	rbfox3a	90	83.498	Astyanax_mexicanus
ENSUAMG00000004668	RBFOX3	92	96.864	ENSBTAG00000006280	RBFOX3	78	96.864	Bos_taurus
ENSUAMG00000004668	RBFOX3	100	92.308	ENSCJAG00000009563	RBFOX3	92	92.308	Callithrix_jacchus
ENSUAMG00000004668	RBFOX3	76	98.739	ENSCAFG00000005547	RBFOX3	85	98.739	Canis_familiaris
ENSUAMG00000004668	RBFOX3	100	85.515	ENSCAFG00020008126	RBFOX3	96	85.515	Canis_lupus_dingo
ENSUAMG00000004668	RBFOX3	97	82.857	ENSCHIG00000009124	RBFOX3	94	83.714	Capra_hircus
ENSUAMG00000004668	RBFOX3	100	85.000	ENSTSYG00000029617	RBFOX3	100	85.000	Carlito_syrichta
ENSUAMG00000004668	RBFOX3	51	96.250	ENSCAPG00000010217	RBFOX3	95	96.250	Cavia_aperea
ENSUAMG00000004668	RBFOX3	97	82.153	ENSCPOG00000021703	RBFOX3	98	81.870	Cavia_porcellus
ENSUAMG00000004668	RBFOX3	100	96.795	ENSCCAG00000028450	RBFOX3	100	96.795	Cebus_capucinus
ENSUAMG00000004668	RBFOX3	100	97.756	ENSCATG00000018349	RBFOX3	100	97.756	Cercocebus_atys
ENSUAMG00000004668	RBFOX3	100	84.444	ENSCLAG00000006449	RBFOX3	100	84.444	Chinchilla_lanigera
ENSUAMG00000004668	RBFOX3	100	98.077	ENSCSAG00000002355	RBFOX3	100	98.077	Chlorocebus_sabaeus
ENSUAMG00000004668	RBFOX3	95	87.879	ENSCPBG00000010904	RBFOX3	95	87.879	Chrysemys_picta_bellii
ENSUAMG00000004668	RBFOX3	100	98.077	ENSCANG00000043120	RBFOX3	100	98.077	Colobus_angolensis_palliatus
ENSUAMG00000004668	RBFOX3	97	78.977	ENSCGRG00001019476	Rbfox3	98	80.682	Cricetulus_griseus_chok1gshd
ENSUAMG00000004668	RBFOX3	97	78.977	ENSCGRG00000003268	Rbfox3	98	80.682	Cricetulus_griseus_crigri
ENSUAMG00000004668	RBFOX3	100	78.797	ENSCSEG00000015567	RBFOX3	80	76.667	Cynoglossus_semilaevis
ENSUAMG00000004668	RBFOX3	100	66.877	ENSCSEG00000020606	RBFOX3	83	67.483	Cynoglossus_semilaevis
ENSUAMG00000004668	RBFOX3	100	82.803	ENSCVAG00000006882	rbfox3b	81	80.000	Cyprinodon_variegatus
ENSUAMG00000004668	RBFOX3	95	80.198	ENSDARG00000010083	rbfox3a	94	81.553	Danio_rerio
ENSUAMG00000004668	RBFOX3	100	72.115	ENSDARG00000074310	rbfox3b	96	73.094	Danio_rerio
ENSUAMG00000004668	RBFOX3	89	72.783	ENSDNOG00000039391	RBFOX3	74	98.333	Dasypus_novemcinctus
ENSUAMG00000004668	RBFOX3	95	71.137	ENSDORG00000005352	Rbfox3	95	67.638	Dipodomys_ordii
ENSUAMG00000004668	RBFOX3	85	62.909	ENSEBUG00000013559	RBFOX3	71	64.453	Eptatretus_burgeri
ENSUAMG00000004668	RBFOX3	100	70.122	ENSEBUG00000002129	RBFOX3	88	70.927	Eptatretus_burgeri
ENSUAMG00000004668	RBFOX3	100	98.089	ENSEASG00005005059	RBFOX3	100	98.089	Equus_asinus_asinus
ENSUAMG00000004668	RBFOX3	100	97.771	ENSECAG00000023811	RBFOX3	100	97.771	Equus_caballus
ENSUAMG00000004668	RBFOX3	86	93.434	ENSEEUG00000013974	RBFOX3	70	93.434	Erinaceus_europaeus
ENSUAMG00000004668	RBFOX3	61	64.211	ENSELUG00000009807	-	50	68.235	Esox_lucius
ENSUAMG00000004668	RBFOX3	100	81.905	ENSELUG00000017963	rbfox3b	95	69.000	Esox_lucius
ENSUAMG00000004668	RBFOX3	100	97.115	ENSFCAG00000002555	RBFOX3	100	97.115	Felis_catus
ENSUAMG00000004668	RBFOX3	95	75.076	ENSFALG00000012288	RBFOX3	81	75.076	Ficedula_albicollis
ENSUAMG00000004668	RBFOX3	97	77.337	ENSFDAG00000007489	RBFOX3	97	77.054	Fukomys_damarensis
ENSUAMG00000004668	RBFOX3	100	73.248	ENSFHEG00000008550	rbfox3b	95	70.000	Fundulus_heteroclitus
ENSUAMG00000004668	RBFOX3	100	63.361	ENSGMOG00000019304	-	95	66.139	Gadus_morhua
ENSUAMG00000004668	RBFOX3	95	93.266	ENSGALG00000032889	RBFOX3	83	93.266	Gallus_gallus
ENSUAMG00000004668	RBFOX3	97	80.719	ENSGAFG00000005025	rbfox3b	86	80.000	Gambusia_affinis
ENSUAMG00000004668	RBFOX3	95	67.429	ENSGACG00000002138	-	92	68.000	Gasterosteus_aculeatus
ENSUAMG00000004668	RBFOX3	95	87.879	ENSGAGG00000020025	RBFOX3	95	87.879	Gopherus_agassizii
ENSUAMG00000004668	RBFOX3	100	97.756	ENSGGOG00000012546	RBFOX3	100	97.756	Gorilla_gorilla
ENSUAMG00000004668	RBFOX3	100	83.121	ENSHBUG00000018099	rbfox3b	81	80.000	Haplochromis_burtoni
ENSUAMG00000004668	RBFOX3	100	79.747	ENSHBUG00000023098	-	86	80.399	Haplochromis_burtoni
ENSUAMG00000004668	RBFOX3	97	81.972	ENSHGLG00000008679	RBFOX3	98	81.408	Heterocephalus_glaber_female
ENSUAMG00000004668	RBFOX3	97	78.028	ENSHGLG00100014739	RBFOX3	81	91.770	Heterocephalus_glaber_male
ENSUAMG00000004668	RBFOX3	96	76.923	ENSHCOG00000007444	RBFOX3	76	77.104	Hippocampus_comes
ENSUAMG00000004668	RBFOX3	100	70.253	ENSHCOG00000001863	RBFOX3	87	68.667	Hippocampus_comes
ENSUAMG00000004668	RBFOX3	100	65.988	ENSIPUG00000021966	rbfox3b	88	75.949	Ictalurus_punctatus
ENSUAMG00000004668	RBFOX3	95	80.198	ENSIPUG00000012010	rbfox3a	90	82.508	Ictalurus_punctatus
ENSUAMG00000004668	RBFOX3	97	77.273	ENSSTOG00000026817	RBFOX3	97	76.623	Ictidomys_tridecemlineatus
ENSUAMG00000004668	RBFOX3	97	82.286	ENSJJAG00000014167	Rbfox3	97	84.000	Jaculus_jaculus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSKMAG00000006726	rbfox3b	81	80.000	Kryptolebias_marmoratus
ENSUAMG00000004668	RBFOX3	95	83.721	ENSLBEG00000022508	-	81	83.056	Labrus_bergylta
ENSUAMG00000004668	RBFOX3	100	82.484	ENSLBEG00000004030	rbfox3b	94	75.000	Labrus_bergylta
ENSUAMG00000004668	RBFOX3	95	75.460	ENSLACG00000018409	-	83	77.607	Latimeria_chalumnae
ENSUAMG00000004668	RBFOX3	95	85.050	ENSLOCG00000012267	rbfox3a	90	87.375	Lepisosteus_oculatus
ENSUAMG00000004668	RBFOX3	97	85.241	ENSLAFG00000016623	RBFOX3	94	81.143	Loxodonta_africana
ENSUAMG00000004668	RBFOX3	100	84.680	ENSMFAG00000002247	RBFOX3	100	84.680	Macaca_fascicularis
ENSUAMG00000004668	RBFOX3	100	97.756	ENSMMUG00000023028	RBFOX3	100	97.756	Macaca_mulatta
ENSUAMG00000004668	RBFOX3	100	97.436	ENSMNEG00000041147	RBFOX3	100	97.436	Macaca_nemestrina
ENSUAMG00000004668	RBFOX3	100	97.756	ENSMLEG00000025686	RBFOX3	100	97.756	Mandrillus_leucophaeus
ENSUAMG00000004668	RBFOX3	100	78.526	ENSMAMG00000019810	rbfox3b	94	75.421	Mastacembelus_armatus
ENSUAMG00000004668	RBFOX3	95	77.409	ENSMAMG00000020600	-	85	74.671	Mastacembelus_armatus
ENSUAMG00000004668	RBFOX3	95	58.788	ENSMZEG00005003055	-	53	89.431	Maylandia_zebra
ENSUAMG00000004668	RBFOX3	100	83.121	ENSMZEG00005000781	rbfox3b	81	80.000	Maylandia_zebra
ENSUAMG00000004668	RBFOX3	62	91.146	ENSMGAG00000005600	RBFOX3	73	91.146	Meleagris_gallopavo
ENSUAMG00000004668	RBFOX3	95	80.058	ENSMAUG00000013543	Rbfox3	96	78.613	Mesocricetus_auratus
ENSUAMG00000004668	RBFOX3	100	96.154	ENSMICG00000014898	RBFOX3	100	96.154	Microcebus_murinus
ENSUAMG00000004668	RBFOX3	97	79.487	ENSMOCG00000015373	Rbfox3	98	80.057	Microtus_ochrogaster
ENSUAMG00000004668	RBFOX3	100	80.251	ENSMMOG00000020193	rbfox3b	81	79.470	Mola_mola
ENSUAMG00000004668	RBFOX3	95	92.929	ENSMODG00000002089	RBFOX3	83	92.929	Monodelphis_domestica
ENSUAMG00000004668	RBFOX3	100	81.847	ENSMALG00000020407	rbfox3b	81	79.333	Monopterus_albus
ENSUAMG00000004668	RBFOX3	100	81.962	ENSMALG00000018270	-	91	75.083	Monopterus_albus
ENSUAMG00000004668	RBFOX3	97	92.763	MGP_CAROLIEiJ_G0017487	Rbfox3	100	97.633	Mus_caroli
ENSUAMG00000004668	RBFOX3	97	94.079	ENSMUSG00000025576	Rbfox3	100	97.041	Mus_musculus
ENSUAMG00000004668	RBFOX3	100	95.860	MGP_PahariEiJ_G0018614	Rbfox3	100	97.633	Mus_pahari
ENSUAMG00000004668	RBFOX3	100	95.847	MGP_SPRETEiJ_G0018331	Rbfox3	100	97.633	Mus_spretus
ENSUAMG00000004668	RBFOX3	100	87.966	ENSMPUG00000012319	RBFOX3	91	87.966	Mustela_putorius_furo
ENSUAMG00000004668	RBFOX3	97	80.342	ENSNGAG00000018006	Rbfox3	98	81.197	Nannospalax_galili
ENSUAMG00000004668	RBFOX3	100	72.843	ENSNBRG00000022885	-	81	71.477	Neolamprologus_brichardi
ENSUAMG00000004668	RBFOX3	100	81.847	ENSNBRG00000010102	rbfox3b	81	80.000	Neolamprologus_brichardi
ENSUAMG00000004668	RBFOX3	100	68.471	ENSNLEG00000000153	-	95	68.471	Nomascus_leucogenys
ENSUAMG00000004668	RBFOX3	95	58.140	ENSMEUG00000004218	-	80	93.617	Notamacropus_eugenii
ENSUAMG00000004668	RBFOX3	76	96.629	ENSOPRG00000016279	-	68	96.629	Ochotona_princeps
ENSUAMG00000004668	RBFOX3	100	97.125	ENSODEG00000009433	RBFOX3	100	97.125	Octodon_degus
ENSUAMG00000004668	RBFOX3	100	80.696	ENSONIG00000007282	-	87	81.395	Oreochromis_niloticus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSONIG00000009549	rbfox3b	92	71.091	Oreochromis_niloticus
ENSUAMG00000004668	RBFOX3	100	82.857	ENSORLG00000000905	rbfox3b	64	80.000	Oryzias_latipes
ENSUAMG00000004668	RBFOX3	100	82.857	ENSORLG00020018030	rbfox3b	81	80.000	Oryzias_latipes_hni
ENSUAMG00000004668	RBFOX3	100	82.540	ENSORLG00015009200	rbfox3b	94	69.667	Oryzias_latipes_hsok
ENSUAMG00000004668	RBFOX3	77	76.357	ENSOMEG00000014677	rbfox3b	76	67.623	Oryzias_melastigma
ENSUAMG00000004668	RBFOX3	95	96.296	ENSOGAG00000029595	RBFOX3	80	96.296	Otolemur_garnettii
ENSUAMG00000004668	RBFOX3	93	67.500	ENSOARG00000002908	RBFOX3	81	67.722	Ovis_aries
ENSUAMG00000004668	RBFOX3	91	97.895	ENSPPAG00000025383	RBFOX3	99	97.895	Pan_paniscus
ENSUAMG00000004668	RBFOX3	100	85.269	ENSPPRG00000007819	RBFOX3	100	85.269	Panthera_pardus
ENSUAMG00000004668	RBFOX3	100	97.756	ENSPTRG00000009727	RBFOX3	100	97.756	Pan_troglodytes
ENSUAMG00000004668	RBFOX3	100	97.756	ENSPANG00000019837	RBFOX3	100	97.756	Papio_anubis
ENSUAMG00000004668	RBFOX3	100	68.671	ENSPKIG00000022633	-	80	65.781	Paramormyrops_kingsleyae
ENSUAMG00000004668	RBFOX3	95	85.382	ENSPKIG00000010299	rbfox3a	73	85.098	Paramormyrops_kingsleyae
ENSUAMG00000004668	RBFOX3	85	83.582	ENSPMGG00000008000	rbfox3b	77	82.609	Periophthalmus_magnuspinnatus
ENSUAMG00000004668	RBFOX3	97	80.057	ENSPEMG00000010500	Rbfox3	98	80.627	Peromyscus_maniculatus_bairdii
ENSUAMG00000004668	RBFOX3	56	74.737	ENSPMAG00000008689	rbfox3b	93	76.842	Petromyzon_marinus
ENSUAMG00000004668	RBFOX3	95	82.492	ENSPCIG00000005766	RBFOX3	95	82.492	Phascolarctos_cinereus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSPFOG00000018294	rbfox3b	78	80.000	Poecilia_formosa
ENSUAMG00000004668	RBFOX3	77	81.148	ENSPLAG00000000481	rbfox3b	75	78.279	Poecilia_latipinna
ENSUAMG00000004668	RBFOX3	100	73.248	ENSPMEG00000022997	rbfox3b	95	70.000	Poecilia_mexicana
ENSUAMG00000004668	RBFOX3	100	83.175	ENSPREG00000012886	rbfox3b	86	80.333	Poecilia_reticulata
ENSUAMG00000004668	RBFOX3	91	91.579	ENSPPYG00000008704	RBFOX3	84	91.579	Pongo_abelii
ENSUAMG00000004668	RBFOX3	95	75.872	ENSPCAG00000001401	RBFOX3	96	77.616	Procavia_capensis
ENSUAMG00000004668	RBFOX3	100	84.123	ENSPCOG00000012689	RBFOX3	100	83.844	Propithecus_coquereli
ENSUAMG00000004668	RBFOX3	95	71.884	ENSPVAG00000015243	RBFOX3	96	74.493	Pteropus_vampyrus
ENSUAMG00000004668	RBFOX3	100	73.567	ENSPNYG00000009079	-	77	72.241	Pundamilia_nyererei
ENSUAMG00000004668	RBFOX3	100	70.476	ENSPNYG00000010414	rbfox3b	79	68.667	Pundamilia_nyererei
ENSUAMG00000004668	RBFOX3	95	80.858	ENSPNAG00000002889	rbfox3a	81	83.168	Pygocentrus_nattereri
ENSUAMG00000004668	RBFOX3	100	65.287	ENSPNAG00000018173	rbfox3b	85	62.963	Pygocentrus_nattereri
ENSUAMG00000004668	RBFOX3	100	95.860	ENSRNOG00000003386	Rbfox3	100	95.860	Rattus_norvegicus
ENSUAMG00000004668	RBFOX3	100	98.077	ENSRBIG00000040449	RBFOX3	87	98.077	Rhinopithecus_bieti
ENSUAMG00000004668	RBFOX3	100	98.077	ENSRROG00000000766	RBFOX3	100	98.077	Rhinopithecus_roxellana
ENSUAMG00000004668	RBFOX3	100	96.795	ENSSBOG00000031591	RBFOX3	100	96.795	Saimiri_boliviensis_boliviensis
ENSUAMG00000004668	RBFOX3	95	83.587	ENSSHAG00000016076	RBFOX3	95	82.492	Sarcophilus_harrisii
ENSUAMG00000004668	RBFOX3	95	83.721	ENSSFOG00015023260	rbfox3a	81	86.047	Scleropages_formosus
ENSUAMG00000004668	RBFOX3	96	68.667	ENSSFOG00015004716	RBFOX3	84	68.896	Scleropages_formosus
ENSUAMG00000004668	RBFOX3	100	80.696	ENSSMAG00000019052	-	95	80.066	Scophthalmus_maximus
ENSUAMG00000004668	RBFOX3	100	78.852	ENSSMAG00000012618	rbfox3b	71	76.266	Scophthalmus_maximus
ENSUAMG00000004668	RBFOX3	100	73.248	ENSSDUG00000023183	rbfox3b	95	70.000	Seriola_dumerili
ENSUAMG00000004668	RBFOX3	95	76.094	ENSSDUG00000015801	-	83	75.987	Seriola_dumerili
ENSUAMG00000004668	RBFOX3	95	77.741	ENSSLDG00000016098	-	83	75.987	Seriola_lalandi_dorsalis
ENSUAMG00000004668	RBFOX3	100	82.803	ENSSLDG00000000149	rbfox3b	81	80.000	Seriola_lalandi_dorsalis
ENSUAMG00000004668	RBFOX3	95	88.963	ENSSPUG00000011733	RBFOX3	95	88.963	Sphenodon_punctatus
ENSUAMG00000004668	RBFOX3	100	73.248	ENSSPAG00000017571	rbfox3b	79	70.000	Stegastes_partitus
ENSUAMG00000004668	RBFOX3	87	75.912	ENSSPAG00000004898	-	75	75.294	Stegastes_partitus
ENSUAMG00000004668	RBFOX3	86	97.026	ENSSSCG00000039498	RBFOX3	82	97.026	Sus_scrofa
ENSUAMG00000004668	RBFOX3	100	77.848	ENSTRUG00000004894	rbfox3b	86	76.299	Takifugu_rubripes
ENSUAMG00000004668	RBFOX3	100	74.063	ENSTNIG00000011278	rbfox3b	82	71.687	Tetraodon_nigroviridis
ENSUAMG00000004668	RBFOX3	87	52.532	ENSTBEG00000004296	-	59	63.134	Tupaia_belangeri
ENSUAMG00000004668	RBFOX3	95	77.616	ENSTTRG00000003676	RBFOX3	96	78.488	Tursiops_truncatus
ENSUAMG00000004668	RBFOX3	100	98.397	ENSVVUG00000017864	RBFOX3	100	98.397	Vulpes_vulpes
ENSUAMG00000004668	RBFOX3	100	66.469	ENSXETG00000020236	rbfox3	81	66.149	Xenopus_tropicalis
ENSUAMG00000004668	RBFOX3	100	81.270	ENSXCOG00000018262	rbfox3b	95	74.247	Xiphophorus_couchianus
ENSUAMG00000004668	RBFOX3	100	82.803	ENSXMAG00000012939	rbfox3b	81	80.000	Xiphophorus_maculatus