EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000004720 (Gene tree)
Gene ID: -
Gene Symbol: APEX2
Alias: APE2|APEXL2|XTH2|ZGRF2
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 8776 bases
Position: chrLZNR01009688.1:54132-62907
Accession: 17889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000005284	Exo_endo_phos	PF03372.23	8.8e-18	1	1
ENSUAMP00000005286	Exo_endo_phos	PF03372.23	7.8e-13	1	1
ENSUAMP00000005281	Exo_endo_phos	PF03372.23	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000006005	APEX2-203	723	-	ENSUAMP00000005286	240 (aa)	-	-
ENSUAMT00000006003	APEX2-202	1548	-	ENSUAMP00000005284	515 (aa)	-	-
ENSUAMT00000006000	APEX2-201	1689	-	ENSUAMP00000005281	423 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000004720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000004720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000004720	APEX2	100	86.293	ENSG00000169188	APEX2	100	86.293	Homo_sapiens
ENSUAMG00000004720	APEX2	93	59.375	ENSAPOG00000005805	apex2	99	45.263	Acanthochromis_polyacanthus
ENSUAMG00000004720	APEX2	100	98.585	ENSAMEG00000003608	APEX2	100	98.450	Ailuropoda_melanoleuca
ENSUAMG00000004720	APEX2	94	57.965	ENSACIG00000010000	apex2	99	45.455	Amphilophus_citrinellus
ENSUAMG00000004720	APEX2	94	58.850	ENSAOCG00000021774	apex2	99	45.439	Amphiprion_ocellaris
ENSUAMG00000004720	APEX2	94	58.850	ENSAPEG00000020890	apex2	93	45.263	Amphiprion_percula
ENSUAMG00000004720	APEX2	93	57.143	ENSATEG00000023600	apex2	99	43.373	Anabas_testudineus
ENSUAMG00000004720	APEX2	94	58.407	ENSACAG00000011201	APEX2	99	50.772	Anolis_carolinensis
ENSUAMG00000004720	APEX2	97	76.000	ENSANAG00000020845	-	100	76.000	Aotus_nancymaae
ENSUAMG00000004720	APEX2	100	85.907	ENSANAG00000021907	-	100	85.907	Aotus_nancymaae
ENSUAMG00000004720	APEX2	93	57.589	ENSAMXG00000007422	apex2	99	44.858	Astyanax_mexicanus
ENSUAMG00000004720	APEX2	100	89.126	ENSBTAG00000013177	APEX2	100	89.126	Bos_taurus
ENSUAMG00000004720	APEX2	100	86.486	ENSCJAG00000016584	APEX2	100	86.486	Callithrix_jacchus
ENSUAMG00000004720	APEX2	100	92.435	ENSCAFG00000014310	APEX2	100	92.233	Canis_familiaris
ENSUAMG00000004720	APEX2	100	95.417	ENSCAFG00020013818	APEX2	100	95.417	Canis_lupus_dingo
ENSUAMG00000004720	APEX2	100	89.126	ENSCHIG00000019916	APEX2	100	89.126	Capra_hircus
ENSUAMG00000004720	APEX2	100	85.853	ENSTSYG00000005612	APEX2	100	85.853	Carlito_syrichta
ENSUAMG00000004720	APEX2	100	77.670	ENSCPOG00000007265	APEX2	100	77.670	Cavia_porcellus
ENSUAMG00000004720	APEX2	100	73.239	ENSCCAG00000025405	-	99	74.447	Cebus_capucinus
ENSUAMG00000004720	APEX2	100	85.446	ENSCATG00000044854	APEX2	100	85.328	Cercocebus_atys
ENSUAMG00000004720	APEX2	100	78.185	ENSCLAG00000017315	APEX2	100	78.185	Chinchilla_lanigera
ENSUAMG00000004720	APEX2	100	85.328	ENSCSAG00000012124	APEX2	100	85.328	Chlorocebus_sabaeus
ENSUAMG00000004720	APEX2	94	55.702	ENSCPBG00000016631	APEX2	99	48.733	Chrysemys_picta_bellii
ENSUAMG00000004720	APEX2	93	46.320	ENSCSAVG00000006052	-	99	40.075	Ciona_savignyi
ENSUAMG00000004720	APEX2	100	85.446	ENSCANG00000003053	APEX2	100	85.328	Colobus_angolensis_palliatus
ENSUAMG00000004720	APEX2	100	81.274	ENSCGRG00001008132	Apex2	100	81.274	Cricetulus_griseus_chok1gshd
ENSUAMG00000004720	APEX2	100	81.274	ENSCGRG00000009667	Apex2	100	81.274	Cricetulus_griseus_crigri
ENSUAMG00000004720	APEX2	93	58.482	ENSCSEG00000019900	apex2	98	45.172	Cynoglossus_semilaevis
ENSUAMG00000004720	APEX2	85	61.275	ENSCVAG00000021583	apex2	99	44.923	Cyprinodon_variegatus
ENSUAMG00000004720	APEX2	93	57.589	ENSDARG00000008472	apex2	99	45.679	Danio_rerio
ENSUAMG00000004720	APEX2	100	82.239	ENSDNOG00000038901	APEX2	100	82.239	Dasypus_novemcinctus
ENSUAMG00000004720	APEX2	90	83.796	ENSDORG00000024412	-	93	83.796	Dipodomys_ordii
ENSUAMG00000004720	APEX2	99	45.068	ENSEBUG00000015654	apex2	99	45.068	Eptatretus_burgeri
ENSUAMG00000004720	APEX2	100	90.680	ENSEASG00005011694	APEX2	91	90.680	Equus_asinus_asinus
ENSUAMG00000004720	APEX2	100	90.680	ENSECAG00000026921	APEX2	91	90.680	Equus_caballus
ENSUAMG00000004720	APEX2	100	79.110	ENSEEUG00000013172	APEX2	100	79.110	Erinaceus_europaeus
ENSUAMG00000004720	APEX2	99	57.741	ENSELUG00000021417	apex2	99	41.849	Esox_lucius
ENSUAMG00000004720	APEX2	100	90.307	ENSFCAG00000021990	APEX2	100	90.291	Felis_catus
ENSUAMG00000004720	APEX2	100	80.502	ENSFDAG00000008076	APEX2	100	80.502	Fukomys_damarensis
ENSUAMG00000004720	APEX2	94	46.018	ENSFHEG00000021411	apex2	99	40.949	Fundulus_heteroclitus
ENSUAMG00000004720	APEX2	83	57.000	ENSGMOG00000019681	apex2	89	56.716	Gadus_morhua
ENSUAMG00000004720	APEX2	93	57.589	ENSGAFG00000005829	apex2	99	44.828	Gambusia_affinis
ENSUAMG00000004720	APEX2	79	61.905	ENSGACG00000012307	apex2	81	61.140	Gasterosteus_aculeatus
ENSUAMG00000004720	APEX2	99	46.469	ENSGAGG00000011520	APEX2	87	47.403	Gopherus_agassizii
ENSUAMG00000004720	APEX2	100	85.907	ENSGGOG00000002056	APEX2	100	85.907	Gorilla_gorilla
ENSUAMG00000004720	APEX2	94	58.407	ENSHBUG00000009938	apex2	99	46.852	Haplochromis_burtoni
ENSUAMG00000004720	APEX2	100	79.151	ENSHGLG00000000273	APEX2	100	79.151	Heterocephalus_glaber_female
ENSUAMG00000004720	APEX2	89	83.099	ENSHGLG00100006734	-	100	83.099	Heterocephalus_glaber_male
ENSUAMG00000004720	APEX2	87	61.538	ENSHCOG00000010165	apex2	99	47.378	Hippocampus_comes
ENSUAMG00000004720	APEX2	86	61.836	ENSHCOG00000018521	-	99	61.836	Hippocampus_comes
ENSUAMG00000004720	APEX2	93	56.388	ENSIPUG00000000352	APEX2	99	44.093	Ictalurus_punctatus
ENSUAMG00000004720	APEX2	100	84.556	ENSSTOG00000025121	APEX2	100	85.135	Ictidomys_tridecemlineatus
ENSUAMG00000004720	APEX2	100	79.923	ENSJJAG00000019611	Apex2	100	79.923	Jaculus_jaculus
ENSUAMG00000004720	APEX2	93	60.268	ENSKMAG00000006985	apex2	99	47.509	Kryptolebias_marmoratus
ENSUAMG00000004720	APEX2	94	57.522	ENSLBEG00000012139	apex2	99	43.945	Labrus_bergylta
ENSUAMG00000004720	APEX2	99	40.925	ENSLACG00000000865	APEX2	99	40.780	Latimeria_chalumnae
ENSUAMG00000004720	APEX2	85	64.390	ENSLOCG00000014467	apex2	99	47.405	Lepisosteus_oculatus
ENSUAMG00000004720	APEX2	100	85.271	ENSLAFG00000018312	APEX2	100	85.271	Loxodonta_africana
ENSUAMG00000004720	APEX2	100	85.521	ENSMFAG00000002486	APEX2	100	85.521	Macaca_fascicularis
ENSUAMG00000004720	APEX2	100	84.942	ENSMMUG00000008428	APEX2	100	84.942	Macaca_mulatta
ENSUAMG00000004720	APEX2	100	85.521	ENSMNEG00000036783	APEX2	100	85.521	Macaca_nemestrina
ENSUAMG00000004720	APEX2	100	85.446	ENSMLEG00000028208	APEX2	100	85.328	Mandrillus_leucophaeus
ENSUAMG00000004720	APEX2	93	57.143	ENSMAMG00000024220	apex2	99	44.143	Mastacembelus_armatus
ENSUAMG00000004720	APEX2	94	58.407	ENSMZEG00005026322	apex2	99	46.310	Maylandia_zebra
ENSUAMG00000004720	APEX2	79	88.360	ENSMAUG00000016924	-	100	88.360	Mesocricetus_auratus
ENSUAMG00000004720	APEX2	100	82.625	ENSMICG00000043181	APEX2	100	82.625	Microcebus_murinus
ENSUAMG00000004720	APEX2	99	80.658	ENSMOCG00000004339	Apex2	100	80.658	Microtus_ochrogaster
ENSUAMG00000004720	APEX2	94	60.177	ENSMMOG00000017340	apex2	99	45.626	Mola_mola
ENSUAMG00000004720	APEX2	93	64.732	ENSMODG00000005341	APEX2	99	55.490	Monodelphis_domestica
ENSUAMG00000004720	APEX2	94	54.867	ENSMALG00000014179	apex2	99	42.905	Monopterus_albus
ENSUAMG00000004720	APEX2	100	78.378	MGP_CAROLIEiJ_G0033484	Apex2	100	80.377	Mus_caroli
ENSUAMG00000004720	APEX2	100	77.950	ENSMUSG00000025269	Apex2	99	80.377	Mus_musculus
ENSUAMG00000004720	APEX2	100	78.337	MGP_PahariEiJ_G0032023	Apex2	97	84.753	Mus_pahari
ENSUAMG00000004720	APEX2	100	78.337	MGP_SPRETEiJ_G0034654	Apex2	100	80.377	Mus_spretus
ENSUAMG00000004720	APEX2	100	93.204	ENSMPUG00000003293	APEX2	100	93.204	Mustela_putorius_furo
ENSUAMG00000004720	APEX2	100	82.524	ENSMLUG00000016298	-	100	82.524	Myotis_lucifugus
ENSUAMG00000004720	APEX2	100	80.194	ENSMLUG00000004562	-	100	80.194	Myotis_lucifugus
ENSUAMG00000004720	APEX2	100	80.309	ENSNGAG00000013576	Apex2	100	80.309	Nannospalax_galili
ENSUAMG00000004720	APEX2	94	57.965	ENSNBRG00000010099	apex2	99	44.655	Neolamprologus_brichardi
ENSUAMG00000004720	APEX2	89	91.549	ENSNLEG00000032067	-	100	90.909	Nomascus_leucogenys
ENSUAMG00000004720	APEX2	89	84.507	ENSODEG00000003095	-	100	84.507	Octodon_degus
ENSUAMG00000004720	APEX2	99	56.118	ENSONIG00000016881	apex2	99	48.393	Oreochromis_niloticus
ENSUAMG00000004720	APEX2	99	49.888	ENSOANG00000000689	-	95	53.099	Ornithorhynchus_anatinus
ENSUAMG00000004720	APEX2	97	81.466	ENSOCUG00000000570	APEX2	100	70.420	Oryctolagus_cuniculus
ENSUAMG00000004720	APEX2	87	62.500	ENSORLG00000014053	apex2	99	45.811	Oryzias_latipes
ENSUAMG00000004720	APEX2	93	57.589	ENSORLG00020013253	apex2	99	45.276	Oryzias_latipes_hni
ENSUAMG00000004720	APEX2	93	58.036	ENSORLG00015007515	apex2	99	45.633	Oryzias_latipes_hsok
ENSUAMG00000004720	APEX2	93	58.036	ENSOMEG00000003655	apex2	99	43.463	Oryzias_melastigma
ENSUAMG00000004720	APEX2	99	83.649	ENSOGAG00000007797	APEX2	99	83.463	Otolemur_garnettii
ENSUAMG00000004720	APEX2	100	88.932	ENSOARG00000005742	APEX2	100	88.932	Ovis_aries
ENSUAMG00000004720	APEX2	100	85.714	ENSPPAG00000035747	APEX2	100	85.714	Pan_paniscus
ENSUAMG00000004720	APEX2	100	90.544	ENSPPRG00000002440	APEX2	100	90.291	Panthera_pardus
ENSUAMG00000004720	APEX2	100	90.071	ENSPTIG00000021651	APEX2	100	89.903	Panthera_tigris_altaica
ENSUAMG00000004720	APEX2	100	85.907	ENSPTRG00000021946	APEX2	100	85.907	Pan_troglodytes
ENSUAMG00000004720	APEX2	100	85.211	ENSPANG00000003595	APEX2	100	85.135	Papio_anubis
ENSUAMG00000004720	APEX2	93	59.375	ENSPKIG00000007752	apex2	99	45.470	Paramormyrops_kingsleyae
ENSUAMG00000004720	APEX2	93	55.804	ENSPMGG00000009151	apex2	99	44.365	Periophthalmus_magnuspinnatus
ENSUAMG00000004720	APEX2	100	79.537	ENSPEMG00000016475	Apex2	100	79.537	Peromyscus_maniculatus_bairdii
ENSUAMG00000004720	APEX2	93	64.286	ENSPCIG00000007633	APEX2	98	55.490	Phascolarctos_cinereus
ENSUAMG00000004720	APEX2	93	57.143	ENSPFOG00000000408	apex2	99	45.000	Poecilia_formosa
ENSUAMG00000004720	APEX2	93	57.143	ENSPLAG00000023814	apex2	99	45.000	Poecilia_latipinna
ENSUAMG00000004720	APEX2	93	57.143	ENSPMEG00000023222	apex2	99	45.000	Poecilia_mexicana
ENSUAMG00000004720	APEX2	100	86.100	ENSPPYG00000020388	APEX2	100	86.100	Pongo_abelii
ENSUAMG00000004720	APEX2	100	85.907	ENSPCOG00000016083	APEX2	100	85.907	Propithecus_coquereli
ENSUAMG00000004720	APEX2	100	86.525	ENSPVAG00000007851	APEX2	100	87.662	Pteropus_vampyrus
ENSUAMG00000004720	APEX2	94	57.965	ENSPNYG00000015698	apex2	99	44.852	Pundamilia_nyererei
ENSUAMG00000004720	APEX2	86	62.136	ENSPNAG00000011666	apex2	99	45.134	Pygocentrus_nattereri
ENSUAMG00000004720	APEX2	100	77.563	ENSRNOG00000000166	Apex2	100	77.563	Rattus_norvegicus
ENSUAMG00000004720	APEX2	100	85.135	ENSRBIG00000036500	APEX2	100	85.135	Rhinopithecus_bieti
ENSUAMG00000004720	APEX2	100	85.135	ENSRROG00000032674	APEX2	100	85.135	Rhinopithecus_roxellana
ENSUAMG00000004720	APEX2	100	67.213	ENSSBOG00000003489	-	99	69.679	Saimiri_boliviensis_boliviensis
ENSUAMG00000004720	APEX2	100	86.100	ENSSBOG00000030500	-	100	86.100	Saimiri_boliviensis_boliviensis
ENSUAMG00000004720	APEX2	93	64.732	ENSSHAG00000007846	APEX2	99	54.902	Sarcophilus_harrisii
ENSUAMG00000004720	APEX2	93	60.714	ENSSFOG00015010354	apex2	99	48.440	Scleropages_formosus
ENSUAMG00000004720	APEX2	93	57.589	ENSSMAG00000012753	apex2	99	44.522	Scophthalmus_maximus
ENSUAMG00000004720	APEX2	94	57.080	ENSSDUG00000022892	apex2	99	45.293	Seriola_dumerili
ENSUAMG00000004720	APEX2	94	57.080	ENSSLDG00000024347	apex2	99	47.495	Seriola_lalandi_dorsalis
ENSUAMG00000004720	APEX2	100	77.413	ENSSARG00000010297	APEX2	100	77.413	Sorex_araneus
ENSUAMG00000004720	APEX2	89	52.804	ENSSPUG00000019279	-	88	52.804	Sphenodon_punctatus
ENSUAMG00000004720	APEX2	93	58.482	ENSSPAG00000016279	apex2	99	45.884	Stegastes_partitus
ENSUAMG00000004720	APEX2	100	86.990	ENSSSCG00000012348	-	100	86.990	Sus_scrofa
ENSUAMG00000004720	APEX2	93	57.589	ENSTRUG00000015660	apex2	99	45.775	Takifugu_rubripes
ENSUAMG00000004720	APEX2	98	46.172	ENSTNIG00000003725	apex2	100	46.172	Tetraodon_nigroviridis
ENSUAMG00000004720	APEX2	100	81.455	ENSTBEG00000010520	APEX2	100	82.581	Tupaia_belangeri
ENSUAMG00000004720	APEX2	100	94.799	ENSUMAG00000002892	APEX2	100	94.369	Ursus_maritimus
ENSUAMG00000004720	APEX2	100	93.204	ENSVVUG00000005989	APEX2	100	93.204	Vulpes_vulpes
ENSUAMG00000004720	APEX2	99	48.980	ENSXETG00000022026	apex2	98	47.092	Xenopus_tropicalis
ENSUAMG00000004720	APEX2	89	60.563	ENSXCOG00000014274	apex2	96	60.563	Xiphophorus_couchianus
ENSUAMG00000004720	APEX2	93	58.036	ENSXMAG00000025740	apex2	99	46.422	Xiphophorus_maculatus