EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000005471 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 39620 bases
Position: chrLZNR01001302.1:280967-320586
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000006215	MIF4G_like	PF09088.11	2.7e-36	1	1
ENSUAMP00000006215	MIF4G_like_2	PF09090.11	1.3e-85	1	1
ENSUAMP00000006215	MIF4G	PF02854.19	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000007029	NCBP1-201	3040	-	ENSUAMP00000006215	790 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000005471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000005471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000005471	NCBP1	100	99.494	ENSG00000136937	NCBP1	100	99.494	Homo_sapiens
ENSUAMG00000005471	NCBP1	99	83.753	ENSAPOG00000008002	NCBP1	99	83.123	Acanthochromis_polyacanthus
ENSUAMG00000005471	NCBP1	100	99.495	ENSAMEG00000004763	NCBP1	100	99.495	Ailuropoda_melanoleuca
ENSUAMG00000005471	NCBP1	99	84.111	ENSACIG00000000274	NCBP1	99	83.480	Amphilophus_citrinellus
ENSUAMG00000005471	NCBP1	99	83.879	ENSAOCG00000021148	NCBP1	99	83.249	Amphiprion_ocellaris
ENSUAMG00000005471	NCBP1	99	83.879	ENSAPEG00000001701	NCBP1	99	83.249	Amphiprion_percula
ENSUAMG00000005471	NCBP1	99	83.249	ENSATEG00000006929	NCBP1	99	82.872	Anabas_testudineus
ENSUAMG00000005471	NCBP1	95	90.489	ENSAPLG00000016318	NCBP1	100	90.621	Anas_platyrhynchos
ENSUAMG00000005471	NCBP1	100	87.141	ENSACAG00000004409	NCBP1	87	87.016	Anolis_carolinensis
ENSUAMG00000005471	NCBP1	100	96.582	ENSANAG00000025744	NCBP1	99	99.580	Aotus_nancymaae
ENSUAMG00000005471	NCBP1	99	82.997	ENSACLG00000014812	NCBP1	99	82.821	Astatotilapia_calliptera
ENSUAMG00000005471	NCBP1	99	81.910	ENSAMXG00000016364	NCBP1	99	81.407	Astyanax_mexicanus
ENSUAMG00000005471	NCBP1	100	99.367	ENSBTAG00000009732	NCBP1	100	99.367	Bos_taurus
ENSUAMG00000005471	NCBP1	99	34.895	WBGene00018156	ncbp-1	99	34.402	Caenorhabditis_elegans
ENSUAMG00000005471	NCBP1	100	99.494	ENSCJAG00000010840	NCBP1	100	99.559	Callithrix_jacchus
ENSUAMG00000005471	NCBP1	100	99.873	ENSCAFG00000002445	NCBP1	100	99.873	Canis_familiaris
ENSUAMG00000005471	NCBP1	99	98.986	ENSCAFG00020017997	NCBP1	100	99.854	Canis_lupus_dingo
ENSUAMG00000005471	NCBP1	100	99.114	ENSCHIG00000020139	NCBP1	100	99.114	Capra_hircus
ENSUAMG00000005471	NCBP1	52	97.087	ENSTSYG00000011914	NCBP1	98	99.687	Carlito_syrichta
ENSUAMG00000005471	NCBP1	81	89.531	ENSCAPG00000014252	NCBP1	90	89.375	Cavia_aperea
ENSUAMG00000005471	NCBP1	97	97.523	ENSCPOG00000012573	NCBP1	99	97.523	Cavia_porcellus
ENSUAMG00000005471	NCBP1	100	99.620	ENSCCAG00000032297	NCBP1	100	99.620	Cebus_capucinus
ENSUAMG00000005471	NCBP1	100	99.494	ENSCATG00000010052	NCBP1	100	99.494	Cercocebus_atys
ENSUAMG00000005471	NCBP1	100	99.494	ENSCLAG00000014339	NCBP1	100	99.494	Chinchilla_lanigera
ENSUAMG00000005471	NCBP1	100	99.494	ENSCSAG00000010929	NCBP1	100	99.494	Chlorocebus_sabaeus
ENSUAMG00000005471	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSUAMG00000005471	NCBP1	100	86.038	ENSCPBG00000024344	NCBP1	99	90.556	Chrysemys_picta_bellii
ENSUAMG00000005471	NCBP1	99	54.362	ENSCING00000008990	-	99	54.235	Ciona_intestinalis
ENSUAMG00000005471	NCBP1	99	53.199	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSUAMG00000005471	NCBP1	100	99.494	ENSCANG00000036913	NCBP1	100	99.494	Colobus_angolensis_palliatus
ENSUAMG00000005471	NCBP1	100	98.354	ENSCGRG00001015771	Ncbp1	100	98.354	Cricetulus_griseus_chok1gshd
ENSUAMG00000005471	NCBP1	99	98.462	ENSCGRG00000010311	Ncbp1	100	98.462	Cricetulus_griseus_crigri
ENSUAMG00000005471	NCBP1	99	82.872	ENSCSEG00000012377	NCBP1	99	83.217	Cynoglossus_semilaevis
ENSUAMG00000005471	NCBP1	99	81.006	ENSCVAG00000008795	NCBP1	99	81.635	Cyprinodon_variegatus
ENSUAMG00000005471	NCBP1	100	98.354	ENSDNOG00000006885	NCBP1	100	98.354	Dasypus_novemcinctus
ENSUAMG00000005471	NCBP1	100	94.081	ENSDORG00000013652	Ncbp1	100	94.081	Dipodomys_ordii
ENSUAMG00000005471	NCBP1	100	57.267	FBgn0022942	Cbp80	100	57.750	Drosophila_melanogaster
ENSUAMG00000005471	NCBP1	84	34.018	FBgn0038887	CG7907	87	34.018	Drosophila_melanogaster
ENSUAMG00000005471	NCBP1	89	93.886	ENSETEG00000009705	NCBP1	89	93.886	Echinops_telfairi
ENSUAMG00000005471	NCBP1	100	73.836	ENSEBUG00000008386	NCBP1	100	73.585	Eptatretus_burgeri
ENSUAMG00000005471	NCBP1	100	99.367	ENSEASG00005022795	NCBP1	100	99.367	Equus_asinus_asinus
ENSUAMG00000005471	NCBP1	100	99.494	ENSECAG00000013847	NCBP1	100	99.494	Equus_caballus
ENSUAMG00000005471	NCBP1	95	94.024	ENSEEUG00000015973	NCBP1	99	93.625	Erinaceus_europaeus
ENSUAMG00000005471	NCBP1	99	80.881	ENSELUG00000022519	NCBP1	99	81.635	Esox_lucius
ENSUAMG00000005471	NCBP1	100	99.747	ENSFCAG00000001206	NCBP1	100	99.747	Felis_catus
ENSUAMG00000005471	NCBP1	98	89.313	ENSFALG00000001193	NCBP1	100	89.440	Ficedula_albicollis
ENSUAMG00000005471	NCBP1	100	99.241	ENSFDAG00000010864	NCBP1	100	99.241	Fukomys_damarensis
ENSUAMG00000005471	NCBP1	99	82.516	ENSFHEG00000000655	NCBP1	99	82.013	Fundulus_heteroclitus
ENSUAMG00000005471	NCBP1	99	79.748	ENSGMOG00000008653	NCBP1	99	79.748	Gadus_morhua
ENSUAMG00000005471	NCBP1	98	90.501	ENSGALG00000002087	NCBP1	100	90.164	Gallus_gallus
ENSUAMG00000005471	NCBP1	99	83.016	ENSGAFG00000017787	NCBP1	99	82.890	Gambusia_affinis
ENSUAMG00000005471	NCBP1	99	82.309	ENSGACG00000016772	NCBP1	98	81.932	Gasterosteus_aculeatus
ENSUAMG00000005471	NCBP1	100	88.679	ENSGAGG00000019483	NCBP1	99	90.278	Gopherus_agassizii
ENSUAMG00000005471	NCBP1	100	99.494	ENSGGOG00000001376	NCBP1	100	99.494	Gorilla_gorilla
ENSUAMG00000005471	NCBP1	99	82.997	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
ENSUAMG00000005471	NCBP1	100	86.490	ENSHGLG00000018112	-	100	86.490	Heterocephalus_glaber_female
ENSUAMG00000005471	NCBP1	100	99.367	ENSHGLG00000001882	NCBP1	100	99.367	Heterocephalus_glaber_female
ENSUAMG00000005471	NCBP1	100	86.237	ENSHGLG00100017373	-	100	86.237	Heterocephalus_glaber_male
ENSUAMG00000005471	NCBP1	100	99.367	ENSHGLG00100013014	NCBP1	100	99.367	Heterocephalus_glaber_male
ENSUAMG00000005471	NCBP1	79	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSUAMG00000005471	NCBP1	99	82.390	ENSIPUG00000007275	ncbp1	99	82.013	Ictalurus_punctatus
ENSUAMG00000005471	NCBP1	100	99.367	ENSSTOG00000002695	NCBP1	100	99.367	Ictidomys_tridecemlineatus
ENSUAMG00000005471	NCBP1	99	82.368	ENSKMAG00000003594	NCBP1	99	86.382	Kryptolebias_marmoratus
ENSUAMG00000005471	NCBP1	99	81.242	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSUAMG00000005471	NCBP1	100	80.348	ENSLACG00000013955	NCBP1	100	79.851	Latimeria_chalumnae
ENSUAMG00000005471	NCBP1	99	72.444	ENSLOCG00000009579	NCBP1	99	72.444	Lepisosteus_oculatus
ENSUAMG00000005471	NCBP1	100	98.861	ENSLAFG00000005999	NCBP1	100	98.861	Loxodonta_africana
ENSUAMG00000005471	NCBP1	100	99.494	ENSMFAG00000030994	NCBP1	100	99.494	Macaca_fascicularis
ENSUAMG00000005471	NCBP1	99	99.487	ENSMMUG00000012281	NCBP1	99	99.487	Macaca_mulatta
ENSUAMG00000005471	NCBP1	100	99.494	ENSMNEG00000042790	NCBP1	100	99.494	Macaca_nemestrina
ENSUAMG00000005471	NCBP1	100	99.494	ENSMLEG00000030374	NCBP1	100	99.494	Mandrillus_leucophaeus
ENSUAMG00000005471	NCBP1	99	83.501	ENSMAMG00000014806	NCBP1	99	82.746	Mastacembelus_armatus
ENSUAMG00000005471	NCBP1	97	82.682	ENSMZEG00005009290	-	99	82.552	Maylandia_zebra
ENSUAMG00000005471	NCBP1	99	82.997	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
ENSUAMG00000005471	NCBP1	99	97.710	ENSMAUG00000020583	Ncbp1	99	97.710	Mesocricetus_auratus
ENSUAMG00000005471	NCBP1	100	99.114	ENSMICG00000012682	NCBP1	100	99.114	Microcebus_murinus
ENSUAMG00000005471	NCBP1	100	97.975	ENSMOCG00000015818	Ncbp1	100	97.975	Microtus_ochrogaster
ENSUAMG00000005471	NCBP1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSUAMG00000005471	NCBP1	100	93.797	ENSMODG00000003202	NCBP1	99	93.544	Monodelphis_domestica
ENSUAMG00000005471	NCBP1	99	82.620	ENSMALG00000003547	NCBP1	99	82.116	Monopterus_albus
ENSUAMG00000005471	NCBP1	100	97.975	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.975	Mus_caroli
ENSUAMG00000005471	NCBP1	100	97.975	ENSMUSG00000028330	Ncbp1	100	97.975	Mus_musculus
ENSUAMG00000005471	NCBP1	100	98.228	MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	Mus_pahari
ENSUAMG00000005471	NCBP1	100	97.975	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.975	Mus_spretus
ENSUAMG00000005471	NCBP1	100	99.747	ENSMPUG00000006399	NCBP1	100	99.747	Mustela_putorius_furo
ENSUAMG00000005471	NCBP1	99	98.074	ENSMLUG00000015201	NCBP1	100	98.074	Myotis_lucifugus
ENSUAMG00000005471	NCBP1	100	98.228	ENSNGAG00000014101	Ncbp1	100	98.228	Nannospalax_galili
ENSUAMG00000005471	NCBP1	76	86.344	ENSNBRG00000014674	NCBP1	97	86.344	Neolamprologus_brichardi
ENSUAMG00000005471	NCBP1	100	99.494	ENSNLEG00000016909	NCBP1	100	99.494	Nomascus_leucogenys
ENSUAMG00000005471	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSUAMG00000005471	NCBP1	84	92.712	ENSOPRG00000002144	-	88	92.712	Ochotona_princeps
ENSUAMG00000005471	NCBP1	100	99.241	ENSODEG00000003232	NCBP1	100	99.241	Octodon_degus
ENSUAMG00000005471	NCBP1	99	82.997	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
ENSUAMG00000005471	NCBP1	79	95.345	ENSOANG00000001918	NCBP1	100	95.345	Ornithorhynchus_anatinus
ENSUAMG00000005471	NCBP1	98	98.586	ENSOCUG00000013853	NCBP1	97	98.586	Oryctolagus_cuniculus
ENSUAMG00000005471	NCBP1	99	81.328	ENSORLG00000011008	NCBP1	99	80.952	Oryzias_latipes
ENSUAMG00000005471	NCBP1	99	81.328	ENSORLG00020017455	NCBP1	99	80.952	Oryzias_latipes_hni
ENSUAMG00000005471	NCBP1	99	81.454	ENSORLG00015012127	NCBP1	99	81.078	Oryzias_latipes_hsok
ENSUAMG00000005471	NCBP1	99	81.955	ENSOMEG00000020698	NCBP1	99	81.830	Oryzias_melastigma
ENSUAMG00000005471	NCBP1	100	99.495	ENSOGAG00000013888	NCBP1	100	99.495	Otolemur_garnettii
ENSUAMG00000005471	NCBP1	100	99.114	ENSOARG00000011233	NCBP1	100	99.114	Ovis_aries
ENSUAMG00000005471	NCBP1	100	99.494	ENSPPAG00000026462	NCBP1	100	99.494	Pan_paniscus
ENSUAMG00000005471	NCBP1	100	99.873	ENSPPRG00000022574	NCBP1	100	99.873	Panthera_pardus
ENSUAMG00000005471	NCBP1	100	99.873	ENSPTIG00000018507	NCBP1	100	99.873	Panthera_tigris_altaica
ENSUAMG00000005471	NCBP1	100	99.494	ENSPTRG00000021167	NCBP1	100	99.494	Pan_troglodytes
ENSUAMG00000005471	NCBP1	100	99.494	ENSPANG00000025591	NCBP1	100	99.494	Papio_anubis
ENSUAMG00000005471	NCBP1	100	81.132	ENSPKIG00000015861	NCBP1	100	81.006	Paramormyrops_kingsleyae
ENSUAMG00000005471	NCBP1	64	89.258	ENSPSIG00000009558	NCBP1	100	89.453	Pelodiscus_sinensis
ENSUAMG00000005471	NCBP1	99	79.849	ENSPMGG00000020476	NCBP1	99	79.345	Periophthalmus_magnuspinnatus
ENSUAMG00000005471	NCBP1	100	97.848	ENSPEMG00000020105	Ncbp1	100	97.848	Peromyscus_maniculatus_bairdii
ENSUAMG00000005471	NCBP1	100	67.621	ENSPMAG00000005533	NCBP1	100	67.621	Petromyzon_marinus
ENSUAMG00000005471	NCBP1	100	93.544	ENSPCIG00000015800	NCBP1	99	94.715	Phascolarctos_cinereus
ENSUAMG00000005471	NCBP1	99	82.206	ENSPFOG00000004158	NCBP1	99	81.830	Poecilia_formosa
ENSUAMG00000005471	NCBP1	99	82.642	ENSPLAG00000020002	NCBP1	99	82.264	Poecilia_latipinna
ENSUAMG00000005471	NCBP1	99	82.642	ENSPMEG00000019821	NCBP1	99	82.264	Poecilia_mexicana
ENSUAMG00000005471	NCBP1	99	82.538	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
ENSUAMG00000005471	NCBP1	100	99.494	ENSPPYG00000019426	NCBP1	100	99.494	Pongo_abelii
ENSUAMG00000005471	NCBP1	90	90.030	ENSPCAG00000009943	NCBP1	90	90.030	Procavia_capensis
ENSUAMG00000005471	NCBP1	82	99.390	ENSPCOG00000020024	NCBP1	98	99.390	Propithecus_coquereli
ENSUAMG00000005471	NCBP1	100	99.241	ENSPVAG00000005924	NCBP1	100	99.241	Pteropus_vampyrus
ENSUAMG00000005471	NCBP1	91	82.961	ENSPNYG00000002140	NCBP1	99	82.821	Pundamilia_nyererei
ENSUAMG00000005471	NCBP1	99	82.538	ENSPNAG00000027753	NCBP1	99	82.161	Pygocentrus_nattereri
ENSUAMG00000005471	NCBP1	100	98.101	ENSRNOG00000023605	Ncbp1	100	98.101	Rattus_norvegicus
ENSUAMG00000005471	NCBP1	100	99.494	ENSRBIG00000043175	NCBP1	100	99.494	Rhinopithecus_bieti
ENSUAMG00000005471	NCBP1	100	99.494	ENSRROG00000029767	NCBP1	100	99.494	Rhinopithecus_roxellana
ENSUAMG00000005471	NCBP1	100	99.620	ENSSBOG00000019378	NCBP1	100	99.620	Saimiri_boliviensis_boliviensis
ENSUAMG00000005471	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSUAMG00000005471	NCBP1	99	81.515	ENSSFOG00015001872	NCBP1	100	80.759	Scleropages_formosus
ENSUAMG00000005471	NCBP1	99	81.864	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSUAMG00000005471	NCBP1	99	83.397	ENSSDUG00000007019	NCBP1	100	82.990	Seriola_dumerili
ENSUAMG00000005471	NCBP1	99	83.123	ENSSLDG00000021924	NCBP1	99	82.746	Seriola_lalandi_dorsalis
ENSUAMG00000005471	NCBP1	85	90.830	ENSSARG00000007274	NCBP1	87	90.830	Sorex_araneus
ENSUAMG00000005471	NCBP1	100	82.025	ENSSPUG00000008609	NCBP1	100	82.025	Sphenodon_punctatus
ENSUAMG00000005471	NCBP1	99	83.627	ENSSPAG00000012550	NCBP1	99	83.249	Stegastes_partitus
ENSUAMG00000005471	NCBP1	100	99.620	ENSSSCG00000005366	NCBP1	100	99.620	Sus_scrofa
ENSUAMG00000005471	NCBP1	100	83.774	ENSTGUG00000001472	NCBP1	100	83.899	Taeniopygia_guttata
ENSUAMG00000005471	NCBP1	99	81.990	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSUAMG00000005471	NCBP1	100	95.823	ENSTBEG00000004035	NCBP1	100	95.823	Tupaia_belangeri
ENSUAMG00000005471	NCBP1	88	99.593	ENSTTRG00000000507	NCBP1	88	99.593	Tursiops_truncatus
ENSUAMG00000005471	NCBP1	97	97.399	ENSUMAG00000011865	NCBP1	100	99.854	Ursus_maritimus
ENSUAMG00000005471	NCBP1	100	95.443	ENSVPAG00000010537	NCBP1	100	95.443	Vicugna_pacos
ENSUAMG00000005471	NCBP1	100	99.873	ENSVVUG00000019725	NCBP1	100	99.873	Vulpes_vulpes
ENSUAMG00000005471	NCBP1	100	81.290	ENSXETG00000010179	ncbp1	100	81.290	Xenopus_tropicalis
ENSUAMG00000005471	NCBP1	99	82.767	ENSXMAG00000018253	NCBP1	99	82.390	Xiphophorus_maculatus