EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000005598 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 60924 bases
Position: chrLZNR01001309.1:35180-96103
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000006369	RTC	PF01137.21	1.8e-61	1	1
ENSUAMP00000006366	RTC	PF01137.21	3.3e-56	1	1
ENSUAMP00000006364	RTC	PF01137.21	5e-56	1	1
ENSUAMP00000006366	RTC_insert	PF05189.13	2.8e-37	1	1
ENSUAMP00000006364	RTC_insert	PF05189.13	3.3e-37	1	1
ENSUAMP00000006369	RTC_insert	PF05189.13	3.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000007202	RCL1-203	1122	-	ENSUAMP00000006369	373 (aa)	-	UPI0001C0EDA8
ENSUAMT00000007199	RCL1-202	1597	-	ENSUAMP00000006366	324 (aa)	-	-
ENSUAMT00000007197	RCL1-201	1696	-	ENSUAMP00000006364	357 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000005598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000005598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000005598	RCL1	100	97.587	ENSG00000120158	RCL1	100	97.674	Homo_sapiens
ENSUAMG00000005598	RCL1	100	82.099	ENSAPOG00000015666	rcl1	100	80.214	Acanthochromis_polyacanthus
ENSUAMG00000005598	RCL1	100	100.000	ENSAMEG00000002631	RCL1	100	100.000	Ailuropoda_melanoleuca
ENSUAMG00000005598	RCL1	99	81.562	ENSACIG00000021195	rcl1	99	80.000	Amphilophus_citrinellus
ENSUAMG00000005598	RCL1	100	81.173	ENSAOCG00000002223	rcl1	100	79.412	Amphiprion_ocellaris
ENSUAMG00000005598	RCL1	100	81.481	ENSAPEG00000006905	rcl1	100	79.679	Amphiprion_percula
ENSUAMG00000005598	RCL1	99	78.438	ENSATEG00000020026	rcl1	99	77.568	Anabas_testudineus
ENSUAMG00000005598	RCL1	88	87.195	ENSAPLG00000006031	RCL1	100	87.195	Anas_platyrhynchos
ENSUAMG00000005598	RCL1	100	85.802	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSUAMG00000005598	RCL1	100	96.783	ENSANAG00000037372	RCL1	100	96.783	Aotus_nancymaae
ENSUAMG00000005598	RCL1	99	80.625	ENSACLG00000021724	rcl1	99	80.000	Astatotilapia_calliptera
ENSUAMG00000005598	RCL1	98	81.761	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSUAMG00000005598	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSUAMG00000005598	RCL1	100	97.319	ENSCJAG00000011202	RCL1	100	97.319	Callithrix_jacchus
ENSUAMG00000005598	RCL1	100	97.855	ENSCAFG00000002091	RCL1	100	97.855	Canis_familiaris
ENSUAMG00000005598	RCL1	100	97.855	ENSCAFG00020000638	RCL1	78	97.855	Canis_lupus_dingo
ENSUAMG00000005598	RCL1	100	95.979	ENSCHIG00000012407	RCL1	100	95.979	Capra_hircus
ENSUAMG00000005598	RCL1	88	97.248	ENSTSYG00000009592	RCL1	97	97.790	Carlito_syrichta
ENSUAMG00000005598	RCL1	68	79.191	ENSCAPG00000013575	RCL1	100	79.191	Cavia_aperea
ENSUAMG00000005598	RCL1	100	96.247	ENSCPOG00000015354	RCL1	100	96.247	Cavia_porcellus
ENSUAMG00000005598	RCL1	100	97.319	ENSCCAG00000033505	RCL1	100	97.319	Cebus_capucinus
ENSUAMG00000005598	RCL1	100	96.783	ENSCATG00000034721	RCL1	100	96.783	Cercocebus_atys
ENSUAMG00000005598	RCL1	100	95.979	ENSCLAG00000007445	RCL1	100	95.979	Chinchilla_lanigera
ENSUAMG00000005598	RCL1	100	97.319	ENSCSAG00000008811	RCL1	100	97.319	Chlorocebus_sabaeus
ENSUAMG00000005598	RCL1	99	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSUAMG00000005598	RCL1	100	90.123	ENSCPBG00000025481	RCL1	94	89.666	Chrysemys_picta_bellii
ENSUAMG00000005598	RCL1	98	60.252	ENSCING00000019565	-	98	59.189	Ciona_intestinalis
ENSUAMG00000005598	RCL1	97	30.284	ENSCSAVG00000007269	-	84	30.189	Ciona_savignyi
ENSUAMG00000005598	RCL1	100	97.319	ENSCANG00000027099	RCL1	100	97.319	Colobus_angolensis_palliatus
ENSUAMG00000005598	RCL1	100	96.605	ENSCGRG00001013748	Rcl1	100	96.515	Cricetulus_griseus_chok1gshd
ENSUAMG00000005598	RCL1	88	96.341	ENSCGRG00000005843	Rcl1	99	96.341	Cricetulus_griseus_crigri
ENSUAMG00000005598	RCL1	99	79.459	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
ENSUAMG00000005598	RCL1	99	82.812	ENSCVAG00000011536	rcl1	99	81.622	Cyprinodon_variegatus
ENSUAMG00000005598	RCL1	98	79.811	ENSDARG00000038312	rcl1	100	77.929	Danio_rerio
ENSUAMG00000005598	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSUAMG00000005598	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSUAMG00000005598	RCL1	100	55.046	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSUAMG00000005598	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSUAMG00000005598	RCL1	100	56.790	ENSEBUG00000016621	-	100	54.667	Eptatretus_burgeri
ENSUAMG00000005598	RCL1	100	97.319	ENSEASG00005010653	RCL1	100	97.319	Equus_asinus_asinus
ENSUAMG00000005598	RCL1	100	97.319	ENSECAG00000015973	RCL1	100	97.319	Equus_caballus
ENSUAMG00000005598	RCL1	100	89.198	ENSEEUG00000009801	RCL1	94	89.198	Erinaceus_europaeus
ENSUAMG00000005598	RCL1	100	79.012	ENSELUG00000007353	rcl1	100	77.273	Esox_lucius
ENSUAMG00000005598	RCL1	100	97.222	ENSFCAG00000014557	RCL1	100	97.051	Felis_catus
ENSUAMG00000005598	RCL1	95	82.817	ENSFALG00000010553	RCL1	94	82.817	Ficedula_albicollis
ENSUAMG00000005598	RCL1	88	94.801	ENSFDAG00000004209	RCL1	100	94.801	Fukomys_damarensis
ENSUAMG00000005598	RCL1	99	82.188	ENSFHEG00000011228	rcl1	99	81.081	Fundulus_heteroclitus
ENSUAMG00000005598	RCL1	99	80.625	ENSGMOG00000004677	rcl1	99	79.189	Gadus_morhua
ENSUAMG00000005598	RCL1	99	86.875	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSUAMG00000005598	RCL1	99	81.250	ENSGAFG00000007257	rcl1	99	79.459	Gambusia_affinis
ENSUAMG00000005598	RCL1	100	80.247	ENSGACG00000017474	rcl1	100	78.610	Gasterosteus_aculeatus
ENSUAMG00000005598	RCL1	100	89.815	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSUAMG00000005598	RCL1	100	97.051	ENSGGOG00000015041	RCL1	100	97.051	Gorilla_gorilla
ENSUAMG00000005598	RCL1	99	80.938	ENSHBUG00000001393	rcl1	99	80.270	Haplochromis_burtoni
ENSUAMG00000005598	RCL1	100	80.429	ENSHGLG00000005368	-	100	79.893	Heterocephalus_glaber_female
ENSUAMG00000005598	RCL1	100	95.988	ENSHGLG00000016452	RCL1	100	95.979	Heterocephalus_glaber_female
ENSUAMG00000005598	RCL1	100	81.233	ENSHGLG00100018010	-	100	80.697	Heterocephalus_glaber_male
ENSUAMG00000005598	RCL1	100	89.008	ENSHGLG00100008718	-	100	89.008	Heterocephalus_glaber_male
ENSUAMG00000005598	RCL1	99	80.000	ENSHCOG00000020170	rcl1	99	79.189	Hippocampus_comes
ENSUAMG00000005598	RCL1	98	82.390	ENSIPUG00000018054	RCL1	99	80.707	Ictalurus_punctatus
ENSUAMG00000005598	RCL1	100	95.979	ENSSTOG00000000023	RCL1	100	95.979	Ictidomys_tridecemlineatus
ENSUAMG00000005598	RCL1	100	84.718	ENSJJAG00000015632	-	100	84.718	Jaculus_jaculus
ENSUAMG00000005598	RCL1	54	72.637	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
ENSUAMG00000005598	RCL1	100	95.988	ENSJJAG00000022803	-	100	95.710	Jaculus_jaculus
ENSUAMG00000005598	RCL1	98	81.388	ENSKMAG00000011946	rcl1	99	79.292	Kryptolebias_marmoratus
ENSUAMG00000005598	RCL1	99	77.812	ENSLBEG00000003957	rcl1	99	77.297	Labrus_bergylta
ENSUAMG00000005598	RCL1	98	86.120	ENSLACG00000004594	RCL1	98	86.120	Latimeria_chalumnae
ENSUAMG00000005598	RCL1	100	84.259	ENSLOCG00000010148	rcl1	98	83.110	Lepisosteus_oculatus
ENSUAMG00000005598	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSUAMG00000005598	RCL1	100	97.319	ENSMFAG00000037906	RCL1	100	97.319	Macaca_fascicularis
ENSUAMG00000005598	RCL1	100	97.319	ENSMNEG00000012288	RCL1	100	97.319	Macaca_nemestrina
ENSUAMG00000005598	RCL1	100	97.319	ENSMLEG00000043088	RCL1	100	97.319	Mandrillus_leucophaeus
ENSUAMG00000005598	RCL1	99	81.875	ENSMAMG00000008311	rcl1	99	80.270	Mastacembelus_armatus
ENSUAMG00000005598	RCL1	99	80.625	ENSMZEG00005017292	rcl1	99	80.000	Maylandia_zebra
ENSUAMG00000005598	RCL1	58	84.932	ENSMGAG00000002245	RCL1	97	84.906	Meleagris_gallopavo
ENSUAMG00000005598	RCL1	58	97.674	ENSMAUG00000008922	Rcl1	100	97.674	Mesocricetus_auratus
ENSUAMG00000005598	RCL1	100	95.710	ENSMICG00000015562	RCL1	100	95.710	Microcebus_murinus
ENSUAMG00000005598	RCL1	100	97.051	ENSMOCG00000012145	Rcl1	100	97.051	Microtus_ochrogaster
ENSUAMG00000005598	RCL1	99	78.816	ENSMMOG00000021264	rcl1	99	76.819	Mola_mola
ENSUAMG00000005598	RCL1	100	93.519	ENSMODG00000015377	RCL1	94	93.803	Monodelphis_domestica
ENSUAMG00000005598	RCL1	99	80.000	ENSMALG00000018618	rcl1	99	78.919	Monopterus_albus
ENSUAMG00000005598	RCL1	100	97.531	MGP_CAROLIEiJ_G0022853	Rcl1	100	97.319	Mus_caroli
ENSUAMG00000005598	RCL1	100	96.914	ENSMUSG00000024785	Rcl1	100	96.783	Mus_musculus
ENSUAMG00000005598	RCL1	100	96.783	MGP_PahariEiJ_G0014346	Rcl1	100	98.235	Mus_pahari
ENSUAMG00000005598	RCL1	100	96.605	MGP_SPRETEiJ_G0023771	Rcl1	100	97.647	Mus_spretus
ENSUAMG00000005598	RCL1	100	98.928	ENSMPUG00000004998	RCL1	100	98.928	Mustela_putorius_furo
ENSUAMG00000005598	RCL1	100	96.783	ENSMLUG00000009654	RCL1	100	96.783	Myotis_lucifugus
ENSUAMG00000005598	RCL1	100	96.783	ENSNGAG00000015327	Rcl1	100	96.783	Nannospalax_galili
ENSUAMG00000005598	RCL1	90	78.932	ENSNBRG00000019854	rcl1	96	75.419	Neolamprologus_brichardi
ENSUAMG00000005598	RCL1	100	96.914	ENSNLEG00000008891	RCL1	100	94.370	Nomascus_leucogenys
ENSUAMG00000005598	RCL1	100	87.131	ENSMEUG00000007653	RCL1	100	87.131	Notamacropus_eugenii
ENSUAMG00000005598	RCL1	100	95.988	ENSOPRG00000010965	RCL1	100	95.979	Ochotona_princeps
ENSUAMG00000005598	RCL1	88	78.916	ENSODEG00000004151	RCL1	96	79.878	Octodon_degus
ENSUAMG00000005598	RCL1	99	80.625	ENSONIG00000003871	rcl1	99	80.000	Oreochromis_niloticus
ENSUAMG00000005598	RCL1	67	86.957	ENSOANG00000013193	-	100	86.957	Ornithorhynchus_anatinus
ENSUAMG00000005598	RCL1	100	97.051	ENSOCUG00000008161	RCL1	100	97.051	Oryctolagus_cuniculus
ENSUAMG00000005598	RCL1	100	79.012	ENSORLG00000010443	rcl1	100	77.540	Oryzias_latipes
ENSUAMG00000005598	RCL1	100	79.012	ENSORLG00020012211	rcl1	100	77.540	Oryzias_latipes_hni
ENSUAMG00000005598	RCL1	100	78.395	ENSORLG00015001122	rcl1	100	77.273	Oryzias_latipes_hsok
ENSUAMG00000005598	RCL1	100	80.556	ENSOMEG00000022976	rcl1	88	79.144	Oryzias_melastigma
ENSUAMG00000005598	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSUAMG00000005598	RCL1	100	96.247	ENSOARG00000013463	RCL1	100	96.247	Ovis_aries
ENSUAMG00000005598	RCL1	100	97.319	ENSPPAG00000037958	RCL1	100	97.319	Pan_paniscus
ENSUAMG00000005598	RCL1	100	96.296	ENSPPRG00000022645	RCL1	100	96.247	Panthera_pardus
ENSUAMG00000005598	RCL1	87	97.239	ENSPTIG00000019031	RCL1	97	96.154	Panthera_tigris_altaica
ENSUAMG00000005598	RCL1	100	97.051	ENSPTRG00000020743	RCL1	100	97.051	Pan_troglodytes
ENSUAMG00000005598	RCL1	100	97.319	ENSPANG00000025151	RCL1	100	97.319	Papio_anubis
ENSUAMG00000005598	RCL1	98	30.408	ENSPKIG00000001653	rtca	85	30.408	Paramormyrops_kingsleyae
ENSUAMG00000005598	RCL1	100	80.556	ENSPKIG00000021022	rcl1	100	78.877	Paramormyrops_kingsleyae
ENSUAMG00000005598	RCL1	88	89.939	ENSPSIG00000012302	RCL1	100	89.939	Pelodiscus_sinensis
ENSUAMG00000005598	RCL1	100	78.704	ENSPMGG00000024007	rcl1	100	77.807	Periophthalmus_magnuspinnatus
ENSUAMG00000005598	RCL1	100	97.587	ENSPEMG00000023275	Rcl1	100	97.587	Peromyscus_maniculatus_bairdii
ENSUAMG00000005598	RCL1	97	31.233	ENSPMAG00000009110	rtca	96	31.233	Petromyzon_marinus
ENSUAMG00000005598	RCL1	100	94.136	ENSPCIG00000000188	RCL1	100	94.102	Phascolarctos_cinereus
ENSUAMG00000005598	RCL1	99	81.875	ENSPFOG00000019682	rcl1	99	80.270	Poecilia_formosa
ENSUAMG00000005598	RCL1	99	81.875	ENSPLAG00000022354	rcl1	99	80.270	Poecilia_latipinna
ENSUAMG00000005598	RCL1	99	81.875	ENSPMEG00000008131	rcl1	99	80.270	Poecilia_mexicana
ENSUAMG00000005598	RCL1	99	81.562	ENSPREG00000008032	rcl1	99	79.730	Poecilia_reticulata
ENSUAMG00000005598	RCL1	100	97.319	ENSPPYG00000019244	RCL1	100	97.319	Pongo_abelii
ENSUAMG00000005598	RCL1	100	85.523	ENSPCAG00000001440	RCL1	100	85.523	Procavia_capensis
ENSUAMG00000005598	RCL1	100	97.051	ENSPCOG00000009611	RCL1	100	97.051	Propithecus_coquereli
ENSUAMG00000005598	RCL1	100	97.319	ENSPVAG00000015752	RCL1	100	97.319	Pteropus_vampyrus
ENSUAMG00000005598	RCL1	99	80.625	ENSPNYG00000012910	rcl1	99	80.000	Pundamilia_nyererei
ENSUAMG00000005598	RCL1	99	81.115	ENSPNAG00000028307	rcl1	92	79.893	Pygocentrus_nattereri
ENSUAMG00000005598	RCL1	100	96.605	ENSRNOG00000015491	Rcl1	100	96.515	Rattus_norvegicus
ENSUAMG00000005598	RCL1	100	97.051	ENSRBIG00000035818	RCL1	100	97.051	Rhinopithecus_bieti
ENSUAMG00000005598	RCL1	100	97.319	ENSRROG00000029781	RCL1	100	97.319	Rhinopithecus_roxellana
ENSUAMG00000005598	RCL1	98	36.216	YOL010W	-	97	36.170	Saccharomyces_cerevisiae
ENSUAMG00000005598	RCL1	100	97.051	ENSSBOG00000026369	RCL1	100	97.051	Saimiri_boliviensis_boliviensis
ENSUAMG00000005598	RCL1	88	92.424	ENSSHAG00000014086	RCL1	100	92.424	Sarcophilus_harrisii
ENSUAMG00000005598	RCL1	100	82.099	ENSSFOG00015023020	rcl1	100	79.947	Scleropages_formosus
ENSUAMG00000005598	RCL1	99	81.250	ENSSMAG00000019751	rcl1	85	80.270	Scophthalmus_maximus
ENSUAMG00000005598	RCL1	100	80.247	ENSSDUG00000006349	rcl1	100	79.144	Seriola_dumerili
ENSUAMG00000005598	RCL1	100	80.556	ENSSLDG00000022076	rcl1	100	79.412	Seriola_lalandi_dorsalis
ENSUAMG00000005598	RCL1	100	96.296	ENSSARG00000009260	RCL1	100	96.247	Sorex_araneus
ENSUAMG00000005598	RCL1	100	88.889	ENSSPUG00000016330	RCL1	100	88.204	Sphenodon_punctatus
ENSUAMG00000005598	RCL1	100	82.099	ENSSPAG00000018038	rcl1	100	80.749	Stegastes_partitus
ENSUAMG00000005598	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSUAMG00000005598	RCL1	100	85.890	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSUAMG00000005598	RCL1	99	80.938	ENSTRUG00000010493	rcl1	99	79.730	Takifugu_rubripes
ENSUAMG00000005598	RCL1	99	78.049	ENSTNIG00000013214	rcl1	99	78.049	Tetraodon_nigroviridis
ENSUAMG00000005598	RCL1	100	90.349	ENSTBEG00000016339	RCL1	100	90.349	Tupaia_belangeri
ENSUAMG00000005598	RCL1	100	96.783	ENSTTRG00000016525	RCL1	100	96.783	Tursiops_truncatus
ENSUAMG00000005598	RCL1	88	99.388	ENSUMAG00000017890	RCL1	97	99.388	Ursus_maritimus
ENSUAMG00000005598	RCL1	88	98.165	ENSVPAG00000009188	RCL1	100	98.165	Vicugna_pacos
ENSUAMG00000005598	RCL1	88	98.171	ENSVVUG00000007304	RCL1	89	98.171	Vulpes_vulpes
ENSUAMG00000005598	RCL1	98	77.673	ENSXETG00000000592	rcl1	100	75.668	Xenopus_tropicalis
ENSUAMG00000005598	RCL1	99	81.875	ENSXCOG00000004922	rcl1	99	80.270	Xiphophorus_couchianus
ENSUAMG00000005598	RCL1	68	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSUAMG00000005598	RCL1	99	81.875	ENSXMAG00000022366	RCL1	99	80.270	Xiphophorus_maculatus