EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000005604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 271848 bases
Position: chrLZNR01003665.1:56716-328563
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000007213	TUDOR	PF00567.24	2.3e-28	1	1
ENSUAMP00000007236	TUDOR	PF00567.24	2.5e-28	1	1
ENSUAMP00000007213	SNase	PF00565.17	2.5e-36	1	3
ENSUAMP00000007213	SNase	PF00565.17	2.5e-36	2	3
ENSUAMP00000007213	SNase	PF00565.17	2.5e-36	3	3
ENSUAMP00000007236	SNase	PF00565.17	1.2e-22	1	2
ENSUAMP00000007236	SNase	PF00565.17	1.2e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000008170	-	1695	-	ENSUAMP00000007213	564 (aa)	-	-
ENSUAMT00000008195	-	1677	-	ENSUAMP00000007236	558 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000005604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000005604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000005604	-	93	98.669	ENSG00000197157	SND1	91	98.669	Homo_sapiens
ENSUAMG00000005604	-	93	83.840	ENSAPOG00000017599	snd1	87	83.840	Acanthochromis_polyacanthus
ENSUAMG00000005604	-	93	99.432	ENSAMEG00000004664	SND1	86	99.432	Ailuropoda_melanoleuca
ENSUAMG00000005604	-	93	83.840	ENSACIG00000003551	snd1	90	83.840	Amphilophus_citrinellus
ENSUAMG00000005604	-	93	83.650	ENSAOCG00000014166	snd1	87	83.650	Amphiprion_ocellaris
ENSUAMG00000005604	-	93	83.650	ENSAPEG00000007067	snd1	87	83.650	Amphiprion_percula
ENSUAMG00000005604	-	90	82.318	ENSATEG00000018475	snd1	78	82.318	Anabas_testudineus
ENSUAMG00000005604	-	93	99.240	ENSANAG00000034463	SND1	93	99.240	Aotus_nancymaae
ENSUAMG00000005604	-	93	83.840	ENSACLG00000022897	snd1	87	83.840	Astatotilapia_calliptera
ENSUAMG00000005604	-	93	84.280	ENSAMXG00000016318	snd1	87	84.280	Astyanax_mexicanus
ENSUAMG00000005604	-	93	98.859	ENSBTAG00000010692	SND1	91	98.859	Bos_taurus
ENSUAMG00000005604	-	91	45.318	WBGene00006626	tsn-1	85	46.067	Caenorhabditis_elegans
ENSUAMG00000005604	-	93	99.049	ENSCJAG00000017668	SND1	92	99.049	Callithrix_jacchus
ENSUAMG00000005604	-	93	99.620	ENSCAFG00000001700	SND1	91	99.620	Canis_familiaris
ENSUAMG00000005604	-	93	99.620	ENSCAFG00020021639	SND1	91	99.620	Canis_lupus_dingo
ENSUAMG00000005604	-	93	98.859	ENSCHIG00000023390	SND1	92	98.859	Capra_hircus
ENSUAMG00000005604	-	54	99.048	ENSTSYG00000004979	SND1	86	99.048	Carlito_syrichta
ENSUAMG00000005604	-	93	89.583	ENSCAPG00000010677	SND1	88	89.583	Cavia_aperea
ENSUAMG00000005604	-	93	97.719	ENSCPOG00000006251	SND1	91	97.719	Cavia_porcellus
ENSUAMG00000005604	-	93	99.240	ENSCCAG00000036847	SND1	93	99.240	Cebus_capucinus
ENSUAMG00000005604	-	93	98.859	ENSCATG00000035214	SND1	93	98.859	Cercocebus_atys
ENSUAMG00000005604	-	93	97.909	ENSCLAG00000011796	SND1	91	97.909	Chinchilla_lanigera
ENSUAMG00000005604	-	93	98.859	ENSCSAG00000010182	SND1	91	98.859	Chlorocebus_sabaeus
ENSUAMG00000005604	-	62	90.196	ENSCHOG00000002218	SND1	63	90.196	Choloepus_hoffmanni
ENSUAMG00000005604	-	93	92.395	ENSCPBG00000018094	SND1	91	92.395	Chrysemys_picta_bellii
ENSUAMG00000005604	-	93	58.700	ENSCING00000000524	-	85	58.700	Ciona_intestinalis
ENSUAMG00000005604	-	93	59.810	ENSCSAVG00000008807	-	85	59.810	Ciona_savignyi
ENSUAMG00000005604	-	93	98.859	ENSCANG00000035119	SND1	91	98.859	Colobus_angolensis_palliatus
ENSUAMG00000005604	-	93	97.148	ENSCGRG00001022514	Snd1	86	97.148	Cricetulus_griseus_chok1gshd
ENSUAMG00000005604	-	93	97.148	ENSCGRG00000012277	Snd1	88	97.148	Cricetulus_griseus_crigri
ENSUAMG00000005604	-	93	82.890	ENSCSEG00000008661	snd1	87	82.890	Cynoglossus_semilaevis
ENSUAMG00000005604	-	93	83.650	ENSCVAG00000010316	snd1	91	81.559	Cyprinodon_variegatus
ENSUAMG00000005604	-	93	84.440	ENSDARG00000006766	snd1	87	84.440	Danio_rerio
ENSUAMG00000005604	-	93	98.106	ENSDNOG00000006795	SND1	93	98.106	Dasypus_novemcinctus
ENSUAMG00000005604	-	93	98.479	ENSDORG00000000336	Snd1	91	98.479	Dipodomys_ordii
ENSUAMG00000005604	-	92	50.746	FBgn0035121	Tudor-SN	86	50.936	Drosophila_melanogaster
ENSUAMG00000005604	-	81	100.000	ENSETEG00000000375	SND1	70	100.000	Echinops_telfairi
ENSUAMG00000005604	-	94	99.055	ENSEASG00005008513	SND1	92	99.055	Equus_asinus_asinus
ENSUAMG00000005604	-	94	98.866	ENSECAG00000011451	SND1	92	98.866	Equus_caballus
ENSUAMG00000005604	-	85	98.086	ENSEEUG00000014737	SND1	72	98.086	Erinaceus_europaeus
ENSUAMG00000005604	-	93	83.460	ENSELUG00000001805	snd1	84	83.460	Esox_lucius
ENSUAMG00000005604	-	93	99.240	ENSFCAG00000008289	SND1	91	99.240	Felis_catus
ENSUAMG00000005604	-	93	98.099	ENSFDAG00000015881	SND1	91	98.099	Fukomys_damarensis
ENSUAMG00000005604	-	93	80.220	ENSFHEG00000004093	snd1	86	83.061	Fundulus_heteroclitus
ENSUAMG00000005604	-	93	84.030	ENSGAFG00000008421	snd1	89	84.030	Gambusia_affinis
ENSUAMG00000005604	-	95	58.240	ENSGACG00000019793	snd1	76	58.240	Gasterosteus_aculeatus
ENSUAMG00000005604	-	93	98.859	ENSGGOG00000009614	SND1	92	98.859	Gorilla_gorilla
ENSUAMG00000005604	-	93	83.840	ENSHBUG00000019135	snd1	87	83.840	Haplochromis_burtoni
ENSUAMG00000005604	-	93	97.909	ENSHGLG00000003618	SND1	86	97.909	Heterocephalus_glaber_female
ENSUAMG00000005604	-	93	97.909	ENSHGLG00100012449	SND1	86	97.909	Heterocephalus_glaber_male
ENSUAMG00000005604	-	93	82.700	ENSHCOG00000005266	snd1	87	82.700	Hippocampus_comes
ENSUAMG00000005604	-	93	82.955	ENSIPUG00000013279	snd1	87	82.955	Ictalurus_punctatus
ENSUAMG00000005604	-	93	98.479	ENSSTOG00000002140	SND1	91	98.479	Ictidomys_tridecemlineatus
ENSUAMG00000005604	-	93	98.859	ENSJJAG00000009561	Snd1	91	98.859	Jaculus_jaculus
ENSUAMG00000005604	-	93	83.460	ENSKMAG00000016997	snd1	87	83.460	Kryptolebias_marmoratus
ENSUAMG00000005604	-	93	89.524	ENSLBEG00000013563	snd1	87	82.700	Labrus_bergylta
ENSUAMG00000005604	-	93	85.472	ENSLOCG00000015537	snd1	85	85.472	Lepisosteus_oculatus
ENSUAMG00000005604	-	93	99.049	ENSLAFG00000009696	SND1	91	99.049	Loxodonta_africana
ENSUAMG00000005604	-	93	98.859	ENSMFAG00000038114	SND1	93	98.859	Macaca_fascicularis
ENSUAMG00000005604	-	93	98.859	ENSMMUG00000015432	SND1	91	98.859	Macaca_mulatta
ENSUAMG00000005604	-	93	98.859	ENSMNEG00000039808	SND1	93	98.859	Macaca_nemestrina
ENSUAMG00000005604	-	93	99.049	ENSMLEG00000029040	SND1	93	99.049	Mandrillus_leucophaeus
ENSUAMG00000005604	-	93	82.700	ENSMAMG00000011739	snd1	87	82.700	Mastacembelus_armatus
ENSUAMG00000005604	-	93	83.840	ENSMZEG00005005681	snd1	87	83.840	Maylandia_zebra
ENSUAMG00000005604	-	93	98.669	ENSMICG00000000097	SND1	92	98.669	Microcebus_murinus
ENSUAMG00000005604	-	93	98.099	ENSMOCG00000005040	Snd1	86	98.099	Microtus_ochrogaster
ENSUAMG00000005604	-	93	83.460	ENSMMOG00000001795	snd1	87	83.460	Mola_mola
ENSUAMG00000005604	-	94	96.981	ENSMODG00000015182	SND1	91	96.981	Monodelphis_domestica
ENSUAMG00000005604	-	93	82.890	ENSMALG00000012071	snd1	87	82.890	Monopterus_albus
ENSUAMG00000005604	-	93	97.909	MGP_CAROLIEiJ_G0028159	Snd1	91	97.909	Mus_caroli
ENSUAMG00000005604	-	93	97.909	ENSMUSG00000001424	Snd1	91	97.909	Mus_musculus
ENSUAMG00000005604	-	93	97.909	MGP_PahariEiJ_G0021917	Snd1	85	100.000	Mus_pahari
ENSUAMG00000005604	-	93	97.909	MGP_SPRETEiJ_G0029159	Snd1	91	97.909	Mus_spretus
ENSUAMG00000005604	-	93	98.669	ENSMPUG00000006545	SND1	91	98.669	Mustela_putorius_furo
ENSUAMG00000005604	-	93	96.276	ENSMLUG00000017130	SND1	93	96.276	Myotis_lucifugus
ENSUAMG00000005604	-	93	98.099	ENSNGAG00000011186	Snd1	91	98.099	Nannospalax_galili
ENSUAMG00000005604	-	93	83.650	ENSNBRG00000006681	snd1	87	83.650	Neolamprologus_brichardi
ENSUAMG00000005604	-	93	98.859	ENSNLEG00000012263	SND1	93	98.859	Nomascus_leucogenys
ENSUAMG00000005604	-	81	100.000	ENSOPRG00000013405	SND1	83	100.000	Ochotona_princeps
ENSUAMG00000005604	-	93	98.099	ENSODEG00000011502	SND1	91	98.099	Octodon_degus
ENSUAMG00000005604	-	93	83.650	ENSONIG00000011481	snd1	85	83.650	Oreochromis_niloticus
ENSUAMG00000005604	-	93	95.437	ENSOANG00000000817	SND1	91	95.437	Ornithorhynchus_anatinus
ENSUAMG00000005604	-	93	98.289	ENSOCUG00000001620	SND1	91	98.289	Oryctolagus_cuniculus
ENSUAMG00000005604	-	93	81.939	ENSORLG00000015201	snd1	87	81.939	Oryzias_latipes
ENSUAMG00000005604	-	93	82.129	ENSORLG00020013991	snd1	87	82.129	Oryzias_latipes_hni
ENSUAMG00000005604	-	93	82.129	ENSORLG00015012436	snd1	87	82.129	Oryzias_latipes_hsok
ENSUAMG00000005604	-	93	83.080	ENSOMEG00000006406	snd1	87	83.080	Oryzias_melastigma
ENSUAMG00000005604	-	93	98.295	ENSOGAG00000013356	SND1	86	98.295	Otolemur_garnettii
ENSUAMG00000005604	-	93	94.106	ENSOARG00000002149	SND1	93	94.106	Ovis_aries
ENSUAMG00000005604	-	93	98.669	ENSPPAG00000042947	SND1	92	98.669	Pan_paniscus
ENSUAMG00000005604	-	93	99.240	ENSPPRG00000004494	SND1	91	99.240	Panthera_pardus
ENSUAMG00000005604	-	93	99.049	ENSPTIG00000014214	SND1	91	99.049	Panthera_tigris_altaica
ENSUAMG00000005604	-	93	98.669	ENSPTRG00000023911	SND1	92	98.669	Pan_troglodytes
ENSUAMG00000005604	-	93	98.859	ENSPANG00000011997	SND1	93	98.859	Papio_anubis
ENSUAMG00000005604	-	93	79.623	ENSPKIG00000023494	snd1	87	79.623	Paramormyrops_kingsleyae
ENSUAMG00000005604	-	87	82.520	ENSPMGG00000003629	snd1	91	82.520	Periophthalmus_magnuspinnatus
ENSUAMG00000005604	-	93	97.909	ENSPEMG00000010240	Snd1	86	97.909	Peromyscus_maniculatus_bairdii
ENSUAMG00000005604	-	93	71.374	ENSPMAG00000007915	-	91	71.374	Petromyzon_marinus
ENSUAMG00000005604	-	93	97.909	ENSPCIG00000011561	SND1	91	97.909	Phascolarctos_cinereus
ENSUAMG00000005604	-	93	83.460	ENSPFOG00000001557	snd1	87	83.460	Poecilia_formosa
ENSUAMG00000005604	-	93	83.270	ENSPLAG00000018459	snd1	85	83.270	Poecilia_latipinna
ENSUAMG00000005604	-	93	83.650	ENSPMEG00000006803	snd1	87	83.650	Poecilia_mexicana
ENSUAMG00000005604	-	93	83.460	ENSPREG00000002189	snd1	87	83.460	Poecilia_reticulata
ENSUAMG00000005604	-	82	98.815	ENSPPYG00000017972	SND1	90	98.815	Pongo_abelii
ENSUAMG00000005604	-	93	86.312	ENSPCAG00000011305	SND1	86	86.312	Procavia_capensis
ENSUAMG00000005604	-	93	98.669	ENSPCOG00000026791	SND1	93	98.669	Propithecus_coquereli
ENSUAMG00000005604	-	93	96.198	ENSPVAG00000013945	SND1	91	96.198	Pteropus_vampyrus
ENSUAMG00000005604	-	93	83.840	ENSPNYG00000000932	snd1	87	83.840	Pundamilia_nyererei
ENSUAMG00000005604	-	93	84.091	ENSPNAG00000001206	snd1	87	84.091	Pygocentrus_nattereri
ENSUAMG00000005604	-	93	97.529	ENSRNOG00000031173	Snd1	93	96.388	Rattus_norvegicus
ENSUAMG00000005604	-	54	99.422	ENSRBIG00000027782	-	83	99.422	Rhinopithecus_bieti
ENSUAMG00000005604	-	93	98.859	ENSRROG00000033020	SND1	91	98.859	Rhinopithecus_roxellana
ENSUAMG00000005604	-	93	99.049	ENSSBOG00000032461	SND1	93	99.049	Saimiri_boliviensis_boliviensis
ENSUAMG00000005604	-	93	93.156	ENSSHAG00000015359	SND1	93	93.156	Sarcophilus_harrisii
ENSUAMG00000005604	-	93	82.453	ENSSFOG00015001103	snd1	87	82.453	Scleropages_formosus
ENSUAMG00000005604	-	93	83.270	ENSSMAG00000001932	snd1	82	83.270	Scophthalmus_maximus
ENSUAMG00000005604	-	93	83.650	ENSSDUG00000002699	snd1	82	83.650	Seriola_dumerili
ENSUAMG00000005604	-	93	75.856	ENSSLDG00000001950	snd1	86	75.856	Seriola_lalandi_dorsalis
ENSUAMG00000005604	-	75	98.113	ENSSARG00000004877	SND1	85	98.113	Sorex_araneus
ENSUAMG00000005604	-	54	81.106	ENSSPUG00000017586	SND1	86	81.106	Sphenodon_punctatus
ENSUAMG00000005604	-	52	88.835	ENSSPAG00000021398	snd1	79	88.835	Stegastes_partitus
ENSUAMG00000005604	-	93	99.430	ENSSSCG00000016590	SND1	91	99.430	Sus_scrofa
ENSUAMG00000005604	-	93	82.319	ENSTRUG00000014067	snd1	87	82.319	Takifugu_rubripes
ENSUAMG00000005604	-	93	82.700	ENSTNIG00000011019	snd1	88	82.700	Tetraodon_nigroviridis
ENSUAMG00000005604	-	87	88.776	ENSTBEG00000003999	SND1	93	88.776	Tupaia_belangeri
ENSUAMG00000005604	-	93	99.240	ENSTTRG00000006059	SND1	86	99.240	Tursiops_truncatus
ENSUAMG00000005604	-	93	100.000	ENSUMAG00000005960	SND1	91	100.000	Ursus_maritimus
ENSUAMG00000005604	-	61	100.000	ENSVPAG00000008302	SND1	61	100.000	Vicugna_pacos
ENSUAMG00000005604	-	93	99.430	ENSVVUG00000007226	SND1	91	99.430	Vulpes_vulpes
ENSUAMG00000005604	-	93	81.973	ENSXETG00000023043	snd1	93	81.973	Xenopus_tropicalis
ENSUAMG00000005604	-	88	78.156	ENSXCOG00000013629	snd1	90	77.956	Xiphophorus_couchianus
ENSUAMG00000005604	-	93	84.030	ENSXMAG00000011469	snd1	87	84.030	Xiphophorus_maculatus