EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000005701 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 12211 bases
Position: chrLZNR01000996.1:6988-19198
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000006508	MMR_HSR1	PF01926.23	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000007358	SRL-202	2424	-	ENSUAMP00000006508	807 (aa)	-	-
ENSUAMT00000007357	SRL-201	489	-	ENSUAMP00000006507	162 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000005701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000005701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000005701	SRL	56	96.484	ENSG00000185739	SRL	100	97.912	Homo_sapiens
ENSUAMG00000005701	SRL	55	76.417	ENSAPOG00000012432	SRL	98	74.720	Acanthochromis_polyacanthus
ENSUAMG00000005701	SRL	55	82.658	ENSAPOG00000018093	srl	100	82.658	Acanthochromis_polyacanthus
ENSUAMG00000005701	SRL	98	99.558	ENSAMEG00000010862	SRL	89	99.558	Ailuropoda_melanoleuca
ENSUAMG00000005701	SRL	56	82.119	ENSACIG00000015799	srl	100	82.119	Amphilophus_citrinellus
ENSUAMG00000005701	SRL	55	75.225	ENSACIG00000015419	SRL	99	75.225	Amphilophus_citrinellus
ENSUAMG00000005701	SRL	54	83.603	ENSAOCG00000007574	srl	99	83.603	Amphiprion_ocellaris
ENSUAMG00000005701	SRL	55	76.018	ENSAOCG00000017049	SRL	96	75.847	Amphiprion_ocellaris
ENSUAMG00000005701	SRL	55	72.398	ENSAPEG00000006533	SRL	96	71.946	Amphiprion_percula
ENSUAMG00000005701	SRL	56	81.718	ENSAPEG00000006911	srl	96	81.718	Amphiprion_percula
ENSUAMG00000005701	SRL	55	83.032	ENSATEG00000024315	srl	94	83.032	Anabas_testudineus
ENSUAMG00000005701	SRL	55	72.967	ENSATEG00000009643	SRL	52	72.967	Anabas_testudineus
ENSUAMG00000005701	SRL	55	90.508	ENSACAG00000016380	SRL	85	88.627	Anolis_carolinensis
ENSUAMG00000005701	SRL	58	68.485	ENSACLG00000024674	SRL	61	68.485	Astatotilapia_calliptera
ENSUAMG00000005701	SRL	57	80.963	ENSACLG00000027685	srl	99	80.963	Astatotilapia_calliptera
ENSUAMG00000005701	SRL	51	77.590	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSUAMG00000005701	SRL	56	81.758	ENSAMXG00000018789	srl	88	81.758	Astyanax_mexicanus
ENSUAMG00000005701	SRL	57	97.368	ENSBTAG00000001078	SRL	99	76.499	Bos_taurus
ENSUAMG00000005701	SRL	56	96.484	ENSCJAG00000019750	SRL	96	96.484	Callithrix_jacchus
ENSUAMG00000005701	SRL	56	99.336	ENSCAFG00000019233	SRL	90	99.336	Canis_familiaris
ENSUAMG00000005701	SRL	98	89.223	ENSCAFG00020025024	SRL	98	88.972	Canis_lupus_dingo
ENSUAMG00000005701	SRL	99	74.787	ENSCHIG00000017927	SRL	99	76.034	Capra_hircus
ENSUAMG00000005701	SRL	56	98.022	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSUAMG00000005701	SRL	56	98.230	ENSCPOG00000012643	SRL	96	98.230	Cavia_porcellus
ENSUAMG00000005701	SRL	55	91.422	ENSCCAG00000032646	SRL	100	97.889	Cebus_capucinus
ENSUAMG00000005701	SRL	98	81.726	ENSCATG00000032227	-	96	96.484	Cercocebus_atys
ENSUAMG00000005701	SRL	56	98.009	ENSCLAG00000016242	SRL	96	98.009	Chinchilla_lanigera
ENSUAMG00000005701	SRL	94	87.786	ENSCSAG00000009635	-	60	89.084	Chlorocebus_sabaeus
ENSUAMG00000005701	SRL	78	96.883	ENSCHOG00000001618	SRL	88	96.883	Choloepus_hoffmanni
ENSUAMG00000005701	SRL	68	93.299	ENSCPBG00000026371	SRL	96	89.032	Chrysemys_picta_bellii
ENSUAMG00000005701	SRL	52	59.952	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSUAMG00000005701	SRL	56	96.484	ENSCANG00000035872	SRL	100	97.912	Colobus_angolensis_palliatus
ENSUAMG00000005701	SRL	98	73.939	ENSCGRG00001016630	Srl	96	97.345	Cricetulus_griseus_chok1gshd
ENSUAMG00000005701	SRL	98	73.939	ENSCGRG00000005458	Srl	96	97.345	Cricetulus_griseus_crigri
ENSUAMG00000005701	SRL	56	71.272	ENSCSEG00000011866	SRL	91	71.272	Cynoglossus_semilaevis
ENSUAMG00000005701	SRL	56	82.561	ENSCSEG00000016151	srl	96	82.561	Cynoglossus_semilaevis
ENSUAMG00000005701	SRL	71	62.876	ENSCVAG00000022465	SRL	60	74.558	Cyprinodon_variegatus
ENSUAMG00000005701	SRL	55	83.484	ENSCVAG00000003513	srl	96	83.484	Cyprinodon_variegatus
ENSUAMG00000005701	SRL	56	83.556	ENSDARG00000104587	srl	96	83.556	Danio_rerio
ENSUAMG00000005701	SRL	99	75.779	ENSDNOG00000011643	SRL	99	75.120	Dasypus_novemcinctus
ENSUAMG00000005701	SRL	56	97.124	ENSDORG00000014807	Srl	96	97.124	Dipodomys_ordii
ENSUAMG00000005701	SRL	99	81.633	ENSEASG00005000942	SRL	99	80.312	Equus_asinus_asinus
ENSUAMG00000005701	SRL	99	79.294	ENSECAG00000024219	SRL	96	97.137	Equus_caballus
ENSUAMG00000005701	SRL	56	79.104	ENSELUG00000015616	srl	96	79.104	Esox_lucius
ENSUAMG00000005701	SRL	99	85.526	ENSFCAG00000022075	SRL	96	98.681	Felis_catus
ENSUAMG00000005701	SRL	56	91.372	ENSFALG00000004328	SRL	64	91.372	Ficedula_albicollis
ENSUAMG00000005701	SRL	56	98.009	ENSFDAG00000006199	SRL	96	98.009	Fukomys_damarensis
ENSUAMG00000005701	SRL	55	82.353	ENSFHEG00000011239	srl	95	82.353	Fundulus_heteroclitus
ENSUAMG00000005701	SRL	55	75.737	ENSFHEG00000011854	SRL	98	76.018	Fundulus_heteroclitus
ENSUAMG00000005701	SRL	55	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSUAMG00000005701	SRL	56	90.949	ENSGALG00000038884	SRL	96	90.949	Gallus_gallus
ENSUAMG00000005701	SRL	56	81.858	ENSGAFG00000000010	srl	98	81.498	Gambusia_affinis
ENSUAMG00000005701	SRL	55	76.471	ENSGAFG00000016984	SRL	98	76.018	Gambusia_affinis
ENSUAMG00000005701	SRL	55	80.574	ENSGACG00000011332	srl	99	80.574	Gasterosteus_aculeatus
ENSUAMG00000005701	SRL	99	69.598	ENSGGOG00000011312	-	98	95.269	Gorilla_gorilla
ENSUAMG00000005701	SRL	55	72.088	ENSHBUG00000015710	SRL	57	72.088	Haplochromis_burtoni
ENSUAMG00000005701	SRL	57	80.963	ENSHBUG00000007581	srl	99	80.963	Haplochromis_burtoni
ENSUAMG00000005701	SRL	56	98.451	ENSHGLG00000015271	SRL	96	98.451	Heterocephalus_glaber_female
ENSUAMG00000005701	SRL	56	98.451	ENSHGLG00100019378	SRL	96	98.451	Heterocephalus_glaber_male
ENSUAMG00000005701	SRL	55	83.032	ENSHCOG00000008687	srl	98	83.032	Hippocampus_comes
ENSUAMG00000005701	SRL	59	67.460	ENSHCOG00000001012	SRL	55	66.270	Hippocampus_comes
ENSUAMG00000005701	SRL	58	79.140	ENSIPUG00000012513	srl	98	79.140	Ictalurus_punctatus
ENSUAMG00000005701	SRL	54	70.183	ENSIPUG00000011609	SRL	89	71.990	Ictalurus_punctatus
ENSUAMG00000005701	SRL	98	71.681	ENSSTOG00000021151	-	96	98.230	Ictidomys_tridecemlineatus
ENSUAMG00000005701	SRL	56	97.566	ENSJJAG00000016400	Srl	96	97.566	Jaculus_jaculus
ENSUAMG00000005701	SRL	55	76.136	ENSKMAG00000019537	SRL	99	74.831	Kryptolebias_marmoratus
ENSUAMG00000005701	SRL	55	82.579	ENSKMAG00000014115	srl	93	85.036	Kryptolebias_marmoratus
ENSUAMG00000005701	SRL	56	81.416	ENSLBEG00000026643	srl	96	81.416	Labrus_bergylta
ENSUAMG00000005701	SRL	55	75.792	ENSLBEG00000013811	SRL	95	75.566	Labrus_bergylta
ENSUAMG00000005701	SRL	56	86.093	ENSLACG00000002825	SRL	100	86.093	Latimeria_chalumnae
ENSUAMG00000005701	SRL	56	84.141	ENSLOCG00000002644	srl	97	84.141	Lepisosteus_oculatus
ENSUAMG00000005701	SRL	98	75.261	ENSLAFG00000006329	SRL	99	74.027	Loxodonta_africana
ENSUAMG00000005701	SRL	53	97.912	ENSMFAG00000037383	SRL	100	97.912	Macaca_fascicularis
ENSUAMG00000005701	SRL	98	83.133	ENSMNEG00000019236	-	96	96.689	Macaca_nemestrina
ENSUAMG00000005701	SRL	56	88.352	ENSMLEG00000032156	SRL	96	88.352	Mandrillus_leucophaeus
ENSUAMG00000005701	SRL	55	73.128	ENSMAMG00000013756	SRL	53	73.026	Mastacembelus_armatus
ENSUAMG00000005701	SRL	55	82.805	ENSMAMG00000023322	srl	94	82.805	Mastacembelus_armatus
ENSUAMG00000005701	SRL	57	80.963	ENSMZEG00005004548	srl	99	80.963	Maylandia_zebra
ENSUAMG00000005701	SRL	58	68.485	ENSMZEG00005004010	SRL	62	68.485	Maylandia_zebra
ENSUAMG00000005701	SRL	67	76.829	ENSMGAG00000009342	SRL	95	92.573	Meleagris_gallopavo
ENSUAMG00000005701	SRL	98	76.611	ENSMICG00000032307	SRL	96	96.264	Microcebus_murinus
ENSUAMG00000005701	SRL	56	97.124	ENSMOCG00000008208	Srl	96	97.124	Microtus_ochrogaster
ENSUAMG00000005701	SRL	55	83.032	ENSMMOG00000013970	srl	98	83.032	Mola_mola
ENSUAMG00000005701	SRL	55	72.527	ENSMMOG00000021572	SRL	99	72.527	Mola_mola
ENSUAMG00000005701	SRL	99	65.618	ENSMODG00000016380	-	80	75.501	Monodelphis_domestica
ENSUAMG00000005701	SRL	55	82.353	ENSMALG00000005039	srl	98	82.353	Monopterus_albus
ENSUAMG00000005701	SRL	51	76.386	ENSMALG00000000670	SRL	97	75.240	Monopterus_albus
ENSUAMG00000005701	SRL	98	71.268	MGP_CAROLIEiJ_G0020400	Srl	96	97.566	Mus_caroli
ENSUAMG00000005701	SRL	98	71.044	ENSMUSG00000022519	Srl	96	97.566	Mus_musculus
ENSUAMG00000005701	SRL	98	68.322	MGP_PahariEiJ_G0016108	Srl	68	81.600	Mus_pahari
ENSUAMG00000005701	SRL	98	71.139	MGP_SPRETEiJ_G0021294	Srl	96	97.566	Mus_spretus
ENSUAMG00000005701	SRL	98	90.012	ENSMPUG00000015025	SRL	98	90.012	Mustela_putorius_furo
ENSUAMG00000005701	SRL	98	80.610	ENSMLUG00000030733	SRL	99	79.243	Myotis_lucifugus
ENSUAMG00000005701	SRL	56	97.124	ENSNGAG00000019741	Srl	96	97.124	Nannospalax_galili
ENSUAMG00000005701	SRL	56	81.498	ENSNBRG00000023775	srl	97	81.004	Neolamprologus_brichardi
ENSUAMG00000005701	SRL	59	67.683	ENSNBRG00000002422	SRL	62	67.589	Neolamprologus_brichardi
ENSUAMG00000005701	SRL	56	90.265	ENSNLEG00000029051	SRL	96	89.670	Nomascus_leucogenys
ENSUAMG00000005701	SRL	99	69.860	ENSOPRG00000000477	-	99	68.464	Ochotona_princeps
ENSUAMG00000005701	SRL	56	96.681	ENSODEG00000013256	SRL	96	96.681	Octodon_degus
ENSUAMG00000005701	SRL	56	81.637	ENSONIG00000005192	srl	96	81.637	Oreochromis_niloticus
ENSUAMG00000005701	SRL	99	70.549	ENSOCUG00000025140	SRL	99	68.266	Oryctolagus_cuniculus
ENSUAMG00000005701	SRL	55	74.944	ENSORLG00000015064	SRL	97	74.944	Oryzias_latipes
ENSUAMG00000005701	SRL	55	82.353	ENSORLG00000008291	srl	91	85.271	Oryzias_latipes
ENSUAMG00000005701	SRL	55	82.127	ENSORLG00020019784	srl	79	85.013	Oryzias_latipes_hni
ENSUAMG00000005701	SRL	55	75.169	ENSORLG00020018173	SRL	97	75.169	Oryzias_latipes_hni
ENSUAMG00000005701	SRL	55	81.674	ENSORLG00015009342	srl	91	81.674	Oryzias_latipes_hsok
ENSUAMG00000005701	SRL	55	75.395	ENSORLG00015019063	SRL	97	75.395	Oryzias_latipes_hsok
ENSUAMG00000005701	SRL	63	66.603	ENSOMEG00000005682	SRL	53	73.187	Oryzias_melastigma
ENSUAMG00000005701	SRL	55	82.045	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSUAMG00000005701	SRL	98	72.418	ENSOGAG00000029266	SRL	99	72.255	Otolemur_garnettii
ENSUAMG00000005701	SRL	70	97.788	ENSOARG00000003074	SRL	65	97.788	Ovis_aries
ENSUAMG00000005701	SRL	98	69.164	ENSPPAG00000024919	-	100	97.912	Pan_paniscus
ENSUAMG00000005701	SRL	56	98.901	ENSPPRG00000010274	SRL	100	99.768	Panthera_pardus
ENSUAMG00000005701	SRL	56	98.901	ENSPTIG00000015162	SRL	100	99.768	Panthera_tigris_altaica
ENSUAMG00000005701	SRL	100	68.298	ENSPTRG00000007712	SRL	100	97.912	Pan_troglodytes
ENSUAMG00000005701	SRL	56	96.909	ENSPANG00000013804	SRL	97	96.909	Papio_anubis
ENSUAMG00000005701	SRL	55	76.018	ENSPKIG00000024974	SRL	88	76.018	Paramormyrops_kingsleyae
ENSUAMG00000005701	SRL	55	84.163	ENSPKIG00000006405	srl	93	84.163	Paramormyrops_kingsleyae
ENSUAMG00000005701	SRL	98	59.417	ENSPSIG00000008586	SRL	67	77.217	Pelodiscus_sinensis
ENSUAMG00000005701	SRL	55	72.789	ENSPMGG00000023505	-	99	72.072	Periophthalmus_magnuspinnatus
ENSUAMG00000005701	SRL	57	82.675	ENSPMGG00000021081	srl	98	82.675	Periophthalmus_magnuspinnatus
ENSUAMG00000005701	SRL	56	97.788	ENSPEMG00000015842	Srl	96	97.788	Peromyscus_maniculatus_bairdii
ENSUAMG00000005701	SRL	52	68.129	ENSPMAG00000004786	srl	99	66.743	Petromyzon_marinus
ENSUAMG00000005701	SRL	56	96.460	ENSPCIG00000012128	SRL	99	96.460	Phascolarctos_cinereus
ENSUAMG00000005701	SRL	56	79.914	ENSPFOG00000011408	srl	95	79.914	Poecilia_formosa
ENSUAMG00000005701	SRL	55	75.566	ENSPLAG00000002932	SRL	98	74.434	Poecilia_latipinna
ENSUAMG00000005701	SRL	56	81.099	ENSPLAG00000008017	srl	98	81.278	Poecilia_latipinna
ENSUAMG00000005701	SRL	56	81.637	ENSPMEG00000006745	srl	98	81.278	Poecilia_mexicana
ENSUAMG00000005701	SRL	63	67.433	ENSPMEG00000005890	SRL	64	69.478	Poecilia_mexicana
ENSUAMG00000005701	SRL	56	81.416	ENSPREG00000007751	srl	99	81.416	Poecilia_reticulata
ENSUAMG00000005701	SRL	55	76.697	ENSPREG00000000315	SRL	98	75.566	Poecilia_reticulata
ENSUAMG00000005701	SRL	52	98.325	ENSPPYG00000007053	SRL	97	98.325	Pongo_abelii
ENSUAMG00000005701	SRL	86	88.956	ENSPCAG00000003378	-	87	88.956	Procavia_capensis
ENSUAMG00000005701	SRL	56	96.044	ENSPCOG00000023135	SRL	100	97.448	Propithecus_coquereli
ENSUAMG00000005701	SRL	99	80.838	ENSPVAG00000006586	SRL	99	78.973	Pteropus_vampyrus
ENSUAMG00000005701	SRL	57	80.963	ENSPNYG00000001200	srl	99	80.963	Pundamilia_nyererei
ENSUAMG00000005701	SRL	58	68.485	ENSPNYG00000003423	SRL	61	68.485	Pundamilia_nyererei
ENSUAMG00000005701	SRL	55	75.113	ENSPNAG00000007361	-	91	75.113	Pygocentrus_nattereri
ENSUAMG00000005701	SRL	57	80.482	ENSPNAG00000023106	srl	96	80.482	Pygocentrus_nattereri
ENSUAMG00000005701	SRL	98	71.154	ENSRNOG00000005269	Srl	99	70.968	Rattus_norvegicus
ENSUAMG00000005701	SRL	98	70.899	ENSRBIG00000042358	SRL	90	74.731	Rhinopithecus_bieti
ENSUAMG00000005701	SRL	98	71.185	ENSSBOG00000029273	SRL	96	96.484	Saimiri_boliviensis_boliviensis
ENSUAMG00000005701	SRL	90	89.084	ENSSHAG00000011715	-	58	96.256	Sarcophilus_harrisii
ENSUAMG00000005701	SRL	55	76.923	ENSSFOG00015021327	SRL	54	72.746	Scleropages_formosus
ENSUAMG00000005701	SRL	55	83.937	ENSSFOG00015009773	srl	97	82.781	Scleropages_formosus
ENSUAMG00000005701	SRL	55	73.085	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSUAMG00000005701	SRL	56	81.778	ENSSMAG00000016274	srl	98	81.778	Scophthalmus_maximus
ENSUAMG00000005701	SRL	55	83.258	ENSSDUG00000010808	srl	97	83.258	Seriola_dumerili
ENSUAMG00000005701	SRL	55	74.554	ENSSDUG00000009161	SRL	98	74.388	Seriola_dumerili
ENSUAMG00000005701	SRL	55	73.961	ENSSLDG00000014601	SRL	99	73.846	Seriola_lalandi_dorsalis
ENSUAMG00000005701	SRL	55	83.258	ENSSLDG00000022024	srl	95	83.258	Seriola_lalandi_dorsalis
ENSUAMG00000005701	SRL	56	91.170	ENSSPUG00000016859	SRL	99	91.170	Sphenodon_punctatus
ENSUAMG00000005701	SRL	55	83.484	ENSSPAG00000019105	srl	94	83.484	Stegastes_partitus
ENSUAMG00000005701	SRL	55	75.909	ENSSPAG00000014254	SRL	98	74.603	Stegastes_partitus
ENSUAMG00000005701	SRL	99	79.044	ENSSSCG00000007949	SRL	99	97.545	Sus_scrofa
ENSUAMG00000005701	SRL	56	91.150	ENSTGUG00000003951	-	99	91.150	Taeniopygia_guttata
ENSUAMG00000005701	SRL	52	75.540	ENSTRUG00000013310	SRL	56	74.118	Takifugu_rubripes
ENSUAMG00000005701	SRL	55	82.883	ENSTRUG00000006005	srl	94	82.883	Takifugu_rubripes
ENSUAMG00000005701	SRL	55	82.658	ENSTNIG00000009739	srl	94	82.658	Tetraodon_nigroviridis
ENSUAMG00000005701	SRL	77	97.727	ENSTTRG00000002709	-	69	97.727	Tursiops_truncatus
ENSUAMG00000005701	SRL	100	99.383	ENSUMAG00000002574	SRL	100	99.383	Ursus_maritimus
ENSUAMG00000005701	SRL	98	89.070	ENSVVUG00000016331	-	87	88.819	Vulpes_vulpes
ENSUAMG00000005701	SRL	56	89.381	ENSXETG00000017313	srl	100	89.381	Xenopus_tropicalis
ENSUAMG00000005701	SRL	52	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSUAMG00000005701	SRL	55	76.018	ENSXCOG00000014584	SRL	98	75.566	Xiphophorus_couchianus
ENSUAMG00000005701	SRL	56	81.858	ENSXMAG00000004625	srl	91	81.858	Xiphophorus_maculatus
ENSUAMG00000005701	SRL	63	67.176	ENSXMAG00000027598	SRL	66	70.080	Xiphophorus_maculatus