EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000005751 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 8985 bases
Position: chrLZNR01002135.1:39634-48618
Accession: 28270
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000006605	R3H	PF01424.22	1.3e-06	1	1
ENSUAMP00000006606	R3H	PF01424.22	2.6e-06	1	1
ENSUAMP00000006603	R3H	PF01424.22	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000007466	R3HDM4-203	672	-	ENSUAMP00000006606	223 (aa)	-	-
ENSUAMT00000007465	R3HDM4-202	756	-	ENSUAMP00000006605	251 (aa)	-	-
ENSUAMT00000007463	R3HDM4-201	1586	-	ENSUAMP00000006603	220 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000005751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000005751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000005751	R3HDM4	100	93.722	ENSG00000198858	R3HDM4	90	93.722	Homo_sapiens
ENSUAMG00000005751	R3HDM4	100	99.552	ENSAMEG00000003001	R3HDM4	91	99.552	Ailuropoda_melanoleuca
ENSUAMG00000005751	R3HDM4	100	58.929	ENSACIG00000004672	r3hdm4	86	58.929	Amphilophus_citrinellus
ENSUAMG00000005751	R3HDM4	98	55.856	ENSATEG00000015913	r3hdm4	85	55.204	Anabas_testudineus
ENSUAMG00000005751	R3HDM4	100	93.274	ENSANAG00000029748	R3HDM4	92	93.274	Aotus_nancymaae
ENSUAMG00000005751	R3HDM4	100	95.067	ENSBTAG00000046406	R3HDM4	100	81.985	Bos_taurus
ENSUAMG00000005751	R3HDM4	100	92.377	ENSCJAG00000020114	R3HDM4	83	92.377	Callithrix_jacchus
ENSUAMG00000005751	R3HDM4	100	96.861	ENSCAFG00000019665	R3HDM4	100	83.088	Canis_familiaris
ENSUAMG00000005751	R3HDM4	100	96.413	ENSCAFG00020016880	R3HDM4	100	82.721	Canis_lupus_dingo
ENSUAMG00000005751	R3HDM4	100	95.516	ENSCHIG00000020110	R3HDM4	86	95.516	Capra_hircus
ENSUAMG00000005751	R3HDM4	100	91.928	ENSCCAG00000019955	R3HDM4	81	91.928	Cebus_capucinus
ENSUAMG00000005751	R3HDM4	100	92.889	ENSCATG00000037269	R3HDM4	100	80.657	Cercocebus_atys
ENSUAMG00000005751	R3HDM4	100	91.480	ENSCLAG00000007094	R3HDM4	91	91.480	Chinchilla_lanigera
ENSUAMG00000005751	R3HDM4	100	93.722	ENSCSAG00000012574	R3HDM4	100	80.882	Chlorocebus_sabaeus
ENSUAMG00000005751	R3HDM4	100	73.543	ENSCPBG00000009805	R3HDM4	100	58.889	Chrysemys_picta_bellii
ENSUAMG00000005751	R3HDM4	100	95.516	ENSCANG00000040439	R3HDM4	78	95.516	Colobus_angolensis_palliatus
ENSUAMG00000005751	R3HDM4	99	85.650	ENSCGRG00001021650	R3hdm4	100	73.162	Cricetulus_griseus_chok1gshd
ENSUAMG00000005751	R3HDM4	99	85.650	ENSCGRG00000013169	R3hdm4	100	73.162	Cricetulus_griseus_crigri
ENSUAMG00000005751	R3HDM4	100	55.804	ENSCSEG00000018211	r3hdm4	86	55.804	Cynoglossus_semilaevis
ENSUAMG00000005751	R3HDM4	100	58.036	ENSCVAG00000017127	r3hdm4	93	52.227	Cyprinodon_variegatus
ENSUAMG00000005751	R3HDM4	99	89.286	ENSDORG00000006605	R3hdm4	91	89.286	Dipodomys_ordii
ENSUAMG00000005751	R3HDM4	100	94.619	ENSEASG00005021556	R3HDM4	81	94.619	Equus_asinus_asinus
ENSUAMG00000005751	R3HDM4	100	94.619	ENSECAG00000000003	R3HDM4	100	81.985	Equus_caballus
ENSUAMG00000005751	R3HDM4	100	97.758	ENSFCAG00000042437	R3HDM4	100	83.824	Felis_catus
ENSUAMG00000005751	R3HDM4	100	70.404	ENSFALG00000013938	R3HDM4	92	70.404	Ficedula_albicollis
ENSUAMG00000005751	R3HDM4	100	89.732	ENSFDAG00000017040	R3HDM4	91	89.732	Fukomys_damarensis
ENSUAMG00000005751	R3HDM4	100	57.778	ENSFHEG00000017636	r3hdm4	93	51.613	Fundulus_heteroclitus
ENSUAMG00000005751	R3HDM4	100	53.125	ENSGMOG00000001231	r3hdm4	97	48.101	Gadus_morhua
ENSUAMG00000005751	R3HDM4	100	68.444	ENSGALG00000001998	R3HDM4	99	59.542	Gallus_gallus
ENSUAMG00000005751	R3HDM4	100	58.929	ENSGAFG00000004173	r3hdm4	93	52.227	Gambusia_affinis
ENSUAMG00000005751	R3HDM4	100	72.646	ENSGAGG00000019698	R3HDM4	99	59.387	Gopherus_agassizii
ENSUAMG00000005751	R3HDM4	100	93.274	ENSGGOG00000008040	R3HDM4	91	93.274	Gorilla_gorilla
ENSUAMG00000005751	R3HDM4	100	58.929	ENSHBUG00000014810	r3hdm4	86	59.111	Haplochromis_burtoni
ENSUAMG00000005751	R3HDM4	100	89.686	ENSHGLG00000016194	R3HDM4	100	76.103	Heterocephalus_glaber_female
ENSUAMG00000005751	R3HDM4	99	55.405	ENSHCOG00000008422	r3hdm4	86	55.405	Hippocampus_comes
ENSUAMG00000005751	R3HDM4	100	57.848	ENSIPUG00000006716	r3hdm4	91	53.390	Ictalurus_punctatus
ENSUAMG00000005751	R3HDM4	100	89.238	ENSSTOG00000023015	R3HDM4	91	89.238	Ictidomys_tridecemlineatus
ENSUAMG00000005751	R3HDM4	99	89.686	ENSJJAG00000012475	R3hdm4	100	76.471	Jaculus_jaculus
ENSUAMG00000005751	R3HDM4	100	56.889	ENSKMAG00000005853	r3hdm4	93	50.403	Kryptolebias_marmoratus
ENSUAMG00000005751	R3HDM4	100	56.250	ENSLBEG00000000730	r3hdm4	91	51.271	Labrus_bergylta
ENSUAMG00000005751	R3HDM4	100	64.126	ENSLACG00000016445	R3HDM4	94	56.379	Latimeria_chalumnae
ENSUAMG00000005751	R3HDM4	100	59.375	ENSLOCG00000002423	r3hdm4	100	49.451	Lepisosteus_oculatus
ENSUAMG00000005751	R3HDM4	99	92.793	ENSLAFG00000017796	R3HDM4	86	92.793	Loxodonta_africana
ENSUAMG00000005751	R3HDM4	100	94.170	ENSMFAG00000044131	R3HDM4	100	81.250	Macaca_fascicularis
ENSUAMG00000005751	R3HDM4	100	94.170	ENSMMUG00000009682	R3HDM4	90	94.170	Macaca_mulatta
ENSUAMG00000005751	R3HDM4	100	94.170	ENSMNEG00000044115	R3HDM4	90	94.170	Macaca_nemestrina
ENSUAMG00000005751	R3HDM4	100	92.889	ENSMLEG00000035693	R3HDM4	83	93.333	Mandrillus_leucophaeus
ENSUAMG00000005751	R3HDM4	85	59.375	ENSMAMG00000005652	r3hdm4	77	59.375	Mastacembelus_armatus
ENSUAMG00000005751	R3HDM4	99	84.753	ENSMAUG00000010611	R3hdm4	86	87.444	Mesocricetus_auratus
ENSUAMG00000005751	R3HDM4	100	91.480	ENSMICG00000010124	R3HDM4	100	79.779	Microcebus_murinus
ENSUAMG00000005751	R3HDM4	99	86.486	ENSMOCG00000002646	R3hdm4	100	72.285	Microtus_ochrogaster
ENSUAMG00000005751	R3HDM4	100	57.143	ENSMMOG00000008253	r3hdm4	86	57.143	Mola_mola
ENSUAMG00000005751	R3HDM4	100	69.058	ENSMODG00000005698	R3HDM4	96	69.058	Monodelphis_domestica
ENSUAMG00000005751	R3HDM4	100	57.589	ENSMALG00000018856	r3hdm4	85	57.589	Monopterus_albus
ENSUAMG00000005751	R3HDM4	99	86.486	MGP_CAROLIEiJ_G0015551	R3hdm4	100	72.694	Mus_caroli
ENSUAMG00000005751	R3HDM4	99	85.586	ENSMUSG00000035781	R3hdm4	100	72.593	Mus_musculus
ENSUAMG00000005751	R3HDM4	99	85.135	MGP_PahariEiJ_G0030964	R3hdm4	100	72.694	Mus_pahari
ENSUAMG00000005751	R3HDM4	99	85.135	MGP_SPRETEiJ_G0016369	-	71	86.486	Mus_spretus
ENSUAMG00000005751	R3HDM4	100	97.309	ENSMPUG00000009394	R3HDM4	83	97.309	Mustela_putorius_furo
ENSUAMG00000005751	R3HDM4	100	58.482	ENSNBRG00000004438	r3hdm4	86	58.667	Neolamprologus_brichardi
ENSUAMG00000005751	R3HDM4	94	90.698	ENSNLEG00000001022	R3HDM4	93	90.698	Nomascus_leucogenys
ENSUAMG00000005751	R3HDM4	100	68.304	ENSMEUG00000011020	R3HDM4	93	68.304	Notamacropus_eugenii
ENSUAMG00000005751	R3HDM4	100	89.686	ENSODEG00000011745	R3HDM4	100	76.838	Octodon_degus
ENSUAMG00000005751	R3HDM4	100	58.482	ENSONIG00000012675	r3hdm4	79	58.667	Oreochromis_niloticus
ENSUAMG00000005751	R3HDM4	100	58.929	ENSOMEG00000003005	r3hdm4	86	58.929	Oryzias_melastigma
ENSUAMG00000005751	R3HDM4	99	91.855	ENSOGAG00000025656	R3HDM4	84	91.855	Otolemur_garnettii
ENSUAMG00000005751	R3HDM4	100	95.067	ENSOARG00000009945	R3HDM4	91	95.067	Ovis_aries
ENSUAMG00000005751	R3HDM4	100	93.722	ENSPPAG00000042371	R3HDM4	91	93.722	Pan_paniscus
ENSUAMG00000005751	R3HDM4	51	95.536	ENSPTRG00000049897	-	85	95.536	Pan_troglodytes
ENSUAMG00000005751	R3HDM4	100	94.170	ENSPANG00000015203	R3HDM4	100	81.250	Papio_anubis
ENSUAMG00000005751	R3HDM4	100	56.250	ENSPKIG00000007421	r3hdm4	84	56.250	Paramormyrops_kingsleyae
ENSUAMG00000005751	R3HDM4	100	54.222	ENSPMGG00000020467	r3hdm4	94	47.410	Periophthalmus_magnuspinnatus
ENSUAMG00000005751	R3HDM4	99	88.288	ENSPEMG00000008365	Tmem259	91	88.288	Peromyscus_maniculatus_bairdii
ENSUAMG00000005751	R3HDM4	100	57.333	ENSPFOG00000003199	r3hdm4	93	52.016	Poecilia_formosa
ENSUAMG00000005751	R3HDM4	100	56.889	ENSPMEG00000014183	r3hdm4	93	51.613	Poecilia_mexicana
ENSUAMG00000005751	R3HDM4	100	57.778	ENSPREG00000010709	r3hdm4	93	52.419	Poecilia_reticulata
ENSUAMG00000005751	R3HDM4	100	93.274	ENSPPYG00000009297	R3HDM4	100	78.229	Pongo_abelii
ENSUAMG00000005751	R3HDM4	69	91.447	ENSPCAG00000010997	R3HDM4	56	91.447	Procavia_capensis
ENSUAMG00000005751	R3HDM4	100	91.480	ENSPCOG00000016785	R3HDM4	100	79.044	Propithecus_coquereli
ENSUAMG00000005751	R3HDM4	100	58.929	ENSPNYG00000017489	r3hdm4	86	59.111	Pundamilia_nyererei
ENSUAMG00000005751	R3HDM4	99	86.036	ENSRNOG00000011489	R3hdm4	100	71.587	Rattus_norvegicus
ENSUAMG00000005751	R3HDM4	100	95.067	ENSRROG00000028842	R3HDM4	83	95.067	Rhinopithecus_roxellana
ENSUAMG00000005751	R3HDM4	100	88.987	ENSSBOG00000019298	R3HDM4	66	90.308	Saimiri_boliviensis_boliviensis
ENSUAMG00000005751	R3HDM4	66	71.233	ENSSHAG00000003036	-	100	71.233	Sarcophilus_harrisii
ENSUAMG00000005751	R3HDM4	100	56.250	ENSSFOG00015020574	r3hdm4	81	56.250	Scleropages_formosus
ENSUAMG00000005751	R3HDM4	100	57.778	ENSSMAG00000021090	r3hdm4	64	57.778	Scophthalmus_maximus
ENSUAMG00000005751	R3HDM4	100	59.111	ENSSDUG00000008488	r3hdm4	86	59.111	Seriola_dumerili
ENSUAMG00000005751	R3HDM4	100	59.111	ENSSLDG00000025328	r3hdm4	86	59.111	Seriola_lalandi_dorsalis
ENSUAMG00000005751	R3HDM4	100	73.094	ENSSPUG00000005434	R3HDM4	87	73.094	Sphenodon_punctatus
ENSUAMG00000005751	R3HDM4	99	54.709	ENSSPAG00000002562	r3hdm4	90	49.787	Stegastes_partitus
ENSUAMG00000005751	R3HDM4	100	95.516	ENSSSCG00000013419	R3HDM4	100	82.353	Sus_scrofa
ENSUAMG00000005751	R3HDM4	85	64.583	ENSTGUG00000000663	R3HDM4	100	58.140	Taeniopygia_guttata
ENSUAMG00000005751	R3HDM4	100	90.135	ENSTTRG00000001470	R3HDM4	91	91.480	Tursiops_truncatus
ENSUAMG00000005751	R3HDM4	100	96.861	ENSVVUG00000022685	R3HDM4	100	84.191	Vulpes_vulpes
ENSUAMG00000005751	R3HDM4	99	45.946	ENSXETG00000033624	R3HDM4	92	41.525	Xenopus_tropicalis
ENSUAMG00000005751	R3HDM4	100	57.778	ENSXCOG00000005127	r3hdm4	93	51.210	Xiphophorus_couchianus
ENSUAMG00000005751	R3HDM4	100	58.036	ENSXMAG00000022875	r3hdm4	93	51.417	Xiphophorus_maculatus