EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000006491 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 38508 bases
Position: chrLZNR01003017.1:197141-235648
Accession: 8651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000007508	KH_1	PF00013.29	1.5e-51	1	3
ENSUAMP00000007508	KH_1	PF00013.29	1.5e-51	2	3
ENSUAMP00000007508	KH_1	PF00013.29	1.5e-51	3	3
ENSUAMP00000007507	KH_1	PF00013.29	2e-51	1	3
ENSUAMP00000007507	KH_1	PF00013.29	2e-51	2	3
ENSUAMP00000007507	KH_1	PF00013.29	2e-51	3	3
ENSUAMP00000007518	KH_1	PF00013.29	9.9e-47	1	3
ENSUAMP00000007518	KH_1	PF00013.29	9.9e-47	2	3
ENSUAMP00000007518	KH_1	PF00013.29	9.9e-47	3	3
ENSUAMP00000007516	KH_1	PF00013.29	1.5e-46	1	3
ENSUAMP00000007516	KH_1	PF00013.29	1.5e-46	2	3
ENSUAMP00000007516	KH_1	PF00013.29	1.5e-46	3	3
ENSUAMP00000007508	KH_2	PF07650.17	7.3e-13	1	1
ENSUAMP00000007507	KH_2	PF07650.17	1e-12	1	1
ENSUAMP00000007518	KH_2	PF07650.17	1e-10	1	1
ENSUAMP00000007516	KH_2	PF07650.17	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000008502	PCBP3-204	1531	-	ENSUAMP00000007518	256 (aa)	-	-
ENSUAMT00000008500	PCBP3-203	1606	-	ENSUAMP00000007516	281 (aa)	-	-
ENSUAMT00000008488	PCBP3-201	1092	-	ENSUAMP00000007507	363 (aa)	-	-
ENSUAMT00000008490	PCBP3-202	1029	-	ENSUAMP00000007508	342 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000006491	PCBP3	100	41.270	ENSUAMG00000009671	FUBP3	55	30.159
ENSUAMG00000006491	PCBP3	96	57.088	ENSUAMG00000020871	PCBP4	71	61.603
ENSUAMG00000006491	PCBP3	98	42.254	ENSUAMG00000025822	NOVA1	59	40.351
ENSUAMG00000006491	PCBP3	97	40.625	ENSUAMG00000004961	-	70	40.625
ENSUAMG00000006491	PCBP3	98	40.845	ENSUAMG00000015647	NOVA2	54	40.845
ENSUAMG00000006491	PCBP3	95	52.857	ENSUAMG00000027171	HNRNPK	55	51.316
ENSUAMG00000006491	PCBP3	96	30.282	ENSUAMG00000021770	-	63	30.282
ENSUAMG00000006491	PCBP3	99	75.839	ENSUAMG00000023889	PCBP2	99	74.854
ENSUAMG00000006491	PCBP3	96	37.037	ENSUAMG00000001610	-	81	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006491	PCBP3	100	99.644	ENSG00000183570	PCBP3	100	94.609	Homo_sapiens
ENSUAMG00000006491	PCBP3	100	75.175	ENSAPOG00000023735	zgc:110045	95	75.175	Acanthochromis_polyacanthus
ENSUAMG00000006491	PCBP3	99	70.468	ENSACIG00000002577	zgc:110045	96	75.962	Amphilophus_citrinellus
ENSUAMG00000006491	PCBP3	92	82.443	ENSAOCG00000005266	zgc:110045	97	72.906	Amphiprion_ocellaris
ENSUAMG00000006491	PCBP3	96	75.725	ENSAPEG00000000729	zgc:110045	69	75.725	Amphiprion_percula
ENSUAMG00000006491	PCBP3	79	72.889	ENSATEG00000011191	zgc:110045	65	72.889	Anabas_testudineus
ENSUAMG00000006491	PCBP3	96	76.449	ENSACLG00000019285	zgc:110045	69	76.449	Astatotilapia_calliptera
ENSUAMG00000006491	PCBP3	100	100.000	ENSBTAG00000030775	PCBP3	100	95.493	Bos_taurus
ENSUAMG00000006491	PCBP3	100	95.957	ENSCAFG00000011907	PCBP3	100	95.957	Canis_familiaris
ENSUAMG00000006491	PCBP3	99	98.615	ENSCHIG00000015841	PCBP3	98	98.615	Capra_hircus
ENSUAMG00000006491	PCBP3	83	99.519	ENSTSYG00000005254	PCBP3	85	99.519	Carlito_syrichta
ENSUAMG00000006491	PCBP3	99	78.611	ENSCAPG00000006767	PCBP3	91	78.611	Cavia_aperea
ENSUAMG00000006491	PCBP3	100	94.609	ENSCPOG00000003648	PCBP3	100	94.609	Cavia_porcellus
ENSUAMG00000006491	PCBP3	100	99.644	ENSCCAG00000024561	PCBP3	100	94.609	Cebus_capucinus
ENSUAMG00000006491	PCBP3	100	99.644	ENSCATG00000038419	PCBP3	100	97.143	Cercocebus_atys
ENSUAMG00000006491	PCBP3	100	95.418	ENSCLAG00000006667	PCBP3	100	95.418	Chinchilla_lanigera
ENSUAMG00000006491	PCBP3	100	99.644	ENSCANG00000026757	PCBP3	100	94.070	Colobus_angolensis_palliatus
ENSUAMG00000006491	PCBP3	100	94.609	ENSCGRG00001006836	Pcbp3	100	94.609	Cricetulus_griseus_chok1gshd
ENSUAMG00000006491	PCBP3	100	94.609	ENSCGRG00000001837	Pcbp3	100	94.609	Cricetulus_griseus_crigri
ENSUAMG00000006491	PCBP3	100	74.825	ENSCSEG00000010020	zgc:110045	95	74.825	Cynoglossus_semilaevis
ENSUAMG00000006491	PCBP3	92	81.679	ENSCVAG00000004726	zgc:110045	89	75.258	Cyprinodon_variegatus
ENSUAMG00000006491	PCBP3	92	67.241	ENSDARG00000057141	zgc:110045	94	74.074	Danio_rerio
ENSUAMG00000006491	PCBP3	99	92.916	ENSDNOG00000049518	PCBP3	100	92.916	Dasypus_novemcinctus
ENSUAMG00000006491	PCBP3	88	86.122	ENSDORG00000003640	Pcbp3	99	82.857	Dipodomys_ordii
ENSUAMG00000006491	PCBP3	92	76.250	ENSEBUG00000009697	zgc:110045	96	75.773	Eptatretus_burgeri
ENSUAMG00000006491	PCBP3	100	99.644	ENSEASG00005007068	PCBP3	100	90.296	Equus_asinus_asinus
ENSUAMG00000006491	PCBP3	100	99.644	ENSECAG00000012413	PCBP3	100	90.566	Equus_caballus
ENSUAMG00000006491	PCBP3	96	74.101	ENSELUG00000019784	zgc:110045	76	79.444	Esox_lucius
ENSUAMG00000006491	PCBP3	100	99.644	ENSFCAG00000014812	PCBP3	100	96.765	Felis_catus
ENSUAMG00000006491	PCBP3	100	99.288	ENSFDAG00000009117	PCBP3	100	94.879	Fukomys_damarensis
ENSUAMG00000006491	PCBP3	92	82.443	ENSFHEG00000018838	-	92	73.134	Fundulus_heteroclitus
ENSUAMG00000006491	PCBP3	100	71.429	ENSGMOG00000005953	zgc:110045	98	66.571	Gadus_morhua
ENSUAMG00000006491	PCBP3	92	66.667	ENSGAFG00000017864	zgc:110045	91	75.243	Gambusia_affinis
ENSUAMG00000006491	PCBP3	100	74.825	ENSGACG00000003044	zgc:110045	99	69.186	Gasterosteus_aculeatus
ENSUAMG00000006491	PCBP3	100	99.644	ENSGGOG00000003683	PCBP3	100	94.340	Gorilla_gorilla
ENSUAMG00000006491	PCBP3	100	75.874	ENSHBUG00000012495	zgc:110045	95	75.874	Haplochromis_burtoni
ENSUAMG00000006491	PCBP3	99	94.550	ENSHGLG00000018620	PCBP3	100	95.763	Heterocephalus_glaber_female
ENSUAMG00000006491	PCBP3	99	94.550	ENSHGLG00100013590	PCBP3	100	95.763	Heterocephalus_glaber_male
ENSUAMG00000006491	PCBP3	100	64.894	ENSHCOG00000000818	zgc:110045	96	73.206	Hippocampus_comes
ENSUAMG00000006491	PCBP3	92	77.863	ENSIPUG00000003932	zgc:110045	77	71.498	Ictalurus_punctatus
ENSUAMG00000006491	PCBP3	100	94.879	ENSSTOG00000007178	PCBP3	100	94.879	Ictidomys_tridecemlineatus
ENSUAMG00000006491	PCBP3	100	94.879	ENSJJAG00000021192	Pcbp3	100	94.879	Jaculus_jaculus
ENSUAMG00000006491	PCBP3	92	82.443	ENSKMAG00000016179	-	90	76.720	Kryptolebias_marmoratus
ENSUAMG00000006491	PCBP3	100	69.333	ENSLBEG00000023074	zgc:110045	99	67.930	Labrus_bergylta
ENSUAMG00000006491	PCBP3	100	93.023	ENSLAFG00000020835	PCBP3	100	99.163	Loxodonta_africana
ENSUAMG00000006491	PCBP3	100	99.644	ENSMFAG00000034574	PCBP3	100	97.143	Macaca_fascicularis
ENSUAMG00000006491	PCBP3	100	99.644	ENSMMUG00000003825	PCBP3	100	94.340	Macaca_mulatta
ENSUAMG00000006491	PCBP3	100	99.644	ENSMNEG00000035551	PCBP3	100	97.143	Macaca_nemestrina
ENSUAMG00000006491	PCBP3	100	99.644	ENSMLEG00000038785	PCBP3	100	97.143	Mandrillus_leucophaeus
ENSUAMG00000006491	PCBP3	96	75.636	ENSMAMG00000014389	zgc:110045	95	75.636	Mastacembelus_armatus
ENSUAMG00000006491	PCBP3	96	76.449	ENSMZEG00005011785	zgc:110045	69	76.449	Maylandia_zebra
ENSUAMG00000006491	PCBP3	99	97.214	ENSMAUG00000007036	Pcbp3	98	97.214	Mesocricetus_auratus
ENSUAMG00000006491	PCBP3	100	99.644	ENSMICG00000012679	PCBP3	100	94.879	Microcebus_murinus
ENSUAMG00000006491	PCBP3	100	94.340	ENSMOCG00000016127	Pcbp3	100	94.340	Microtus_ochrogaster
ENSUAMG00000006491	PCBP3	92	81.679	ENSMMOG00000008399	zgc:110045	85	84.302	Mola_mola
ENSUAMG00000006491	PCBP3	92	81.679	ENSMALG00000008763	zgc:110045	92	79.781	Monopterus_albus
ENSUAMG00000006491	PCBP3	100	94.879	MGP_CAROLIEiJ_G0015475	Pcbp3	100	99.379	Mus_caroli
ENSUAMG00000006491	PCBP3	100	94.609	ENSMUSG00000001120	Pcbp3	99	99.379	Mus_musculus
ENSUAMG00000006491	PCBP3	100	94.879	MGP_PahariEiJ_G0030889	Pcbp3	100	99.379	Mus_pahari
ENSUAMG00000006491	PCBP3	100	94.879	MGP_SPRETEiJ_G0016288	Pcbp3	100	99.379	Mus_spretus
ENSUAMG00000006491	PCBP3	100	93.355	ENSMLUG00000003074	PCBP3	99	91.281	Myotis_lucifugus
ENSUAMG00000006491	PCBP3	100	94.340	ENSNGAG00000005416	Pcbp3	100	94.340	Nannospalax_galili
ENSUAMG00000006491	PCBP3	96	76.449	ENSNBRG00000017646	zgc:110045	69	76.449	Neolamprologus_brichardi
ENSUAMG00000006491	PCBP3	100	99.644	ENSNLEG00000002639	PCBP3	100	94.879	Nomascus_leucogenys
ENSUAMG00000006491	PCBP3	100	87.535	ENSMEUG00000012960	PCBP3	100	87.535	Notamacropus_eugenii
ENSUAMG00000006491	PCBP3	99	97.784	ENSODEG00000012873	PCBP3	100	97.784	Octodon_degus
ENSUAMG00000006491	PCBP3	96	76.449	ENSONIG00000010370	zgc:110045	73	76.449	Oreochromis_niloticus
ENSUAMG00000006491	PCBP3	94	89.928	ENSOANG00000006265	PCBP3	98	89.928	Ornithorhynchus_anatinus
ENSUAMG00000006491	PCBP3	96	75.725	ENSORLG00000014385	-	69	75.725	Oryzias_latipes
ENSUAMG00000006491	PCBP3	96	75.362	ENSORLG00020003139	zgc:110045	86	76.355	Oryzias_latipes_hni
ENSUAMG00000006491	PCBP3	96	75.362	ENSOMEG00000015459	-	69	75.362	Oryzias_melastigma
ENSUAMG00000006491	PCBP3	100	90.970	ENSOARG00000012704	PCBP3	100	89.516	Ovis_aries
ENSUAMG00000006491	PCBP3	100	99.644	ENSPPAG00000021940	PCBP3	100	94.340	Pan_paniscus
ENSUAMG00000006491	PCBP3	100	99.644	ENSPPRG00000003933	PCBP3	100	96.765	Panthera_pardus
ENSUAMG00000006491	PCBP3	100	85.054	ENSPTIG00000012038	PCBP3	100	86.027	Panthera_tigris_altaica
ENSUAMG00000006491	PCBP3	100	77.031	ENSPTRG00000014010	PCBP3	100	77.031	Pan_troglodytes
ENSUAMG00000006491	PCBP3	100	99.644	ENSPANG00000023631	PCBP3	100	97.143	Papio_anubis
ENSUAMG00000006491	PCBP3	95	69.149	ENSPMGG00000021588	-	72	62.500	Periophthalmus_magnuspinnatus
ENSUAMG00000006491	PCBP3	72	83.333	ENSPMGG00000022531	-	92	77.720	Periophthalmus_magnuspinnatus
ENSUAMG00000006491	PCBP3	100	96.199	ENSPEMG00000000587	Pcbp3	100	94.609	Peromyscus_maniculatus_bairdii
ENSUAMG00000006491	PCBP3	80	72.414	ENSPMAG00000004719	zgc:110045	94	70.000	Petromyzon_marinus
ENSUAMG00000006491	PCBP3	98	75.089	ENSPFOG00000002348	zgc:110045	94	75.089	Poecilia_formosa
ENSUAMG00000006491	PCBP3	92	66.667	ENSPLAG00000017488	zgc:110045	93	76.847	Poecilia_latipinna
ENSUAMG00000006491	PCBP3	97	73.455	ENSPMEG00000012762	zgc:110045	91	75.243	Poecilia_mexicana
ENSUAMG00000006491	PCBP3	96	75.725	ENSPREG00000001797	zgc:110045	94	73.585	Poecilia_reticulata
ENSUAMG00000006491	PCBP3	93	89.583	ENSPPYG00000011525	-	92	97.992	Pongo_abelii
ENSUAMG00000006491	PCBP3	96	75.931	ENSPCAG00000001454	PCBP3	100	75.931	Procavia_capensis
ENSUAMG00000006491	PCBP3	100	99.644	ENSPCOG00000013797	PCBP3	100	94.879	Propithecus_coquereli
ENSUAMG00000006491	PCBP3	85	95.833	ENSPVAG00000000832	PCBP3	79	95.833	Pteropus_vampyrus
ENSUAMG00000006491	PCBP3	80	80.874	ENSPNYG00000004637	zgc:110045	96	77.340	Pundamilia_nyererei
ENSUAMG00000006491	PCBP3	96	75.862	ENSPNAG00000004501	zgc:110045	94	74.882	Pygocentrus_nattereri
ENSUAMG00000006491	PCBP3	100	99.644	ENSRROG00000034567	PCBP3	100	94.340	Rhinopithecus_roxellana
ENSUAMG00000006491	PCBP3	100	100.000	ENSSBOG00000005789	PCBP3	100	94.879	Saimiri_boliviensis_boliviensis
ENSUAMG00000006491	PCBP3	96	75.725	ENSSMAG00000013541	zgc:110045	91	72.685	Scophthalmus_maximus
ENSUAMG00000006491	PCBP3	79	75.439	ENSSDUG00000019371	zgc:110045	66	75.439	Seriola_dumerili
ENSUAMG00000006491	PCBP3	96	76.087	ENSSLDG00000021064	zgc:110045	69	76.087	Seriola_lalandi_dorsalis
ENSUAMG00000006491	PCBP3	92	73.846	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSUAMG00000006491	PCBP3	100	75.524	ENSSPAG00000000563	zgc:110045	95	75.524	Stegastes_partitus
ENSUAMG00000006491	PCBP3	100	99.644	ENSSSCG00000023041	PCBP3	100	90.027	Sus_scrofa
ENSUAMG00000006491	PCBP3	92	83.969	ENSTRUG00000017789	zgc:110045	92	79.032	Takifugu_rubripes
ENSUAMG00000006491	PCBP3	92	82.443	ENSTNIG00000003546	zgc:110045	85	78.035	Tetraodon_nigroviridis
ENSUAMG00000006491	PCBP3	69	76.923	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSUAMG00000006491	PCBP3	100	90.463	ENSUMAG00000025403	PCBP3	100	90.463	Ursus_maritimus
ENSUAMG00000006491	PCBP3	100	92.711	ENSVVUG00000023862	PCBP3	100	92.711	Vulpes_vulpes
ENSUAMG00000006491	PCBP3	92	80.147	ENSXCOG00000005968	zgc:110045	82	84.416	Xiphophorus_couchianus
ENSUAMG00000006491	PCBP3	96	75.362	ENSXMAG00000008030	zgc:110045	70	75.362	Xiphophorus_maculatus