EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000006568 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: FLJ00173|KIAA0963|Sno|Stno
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 40726 bases
Position: chrLZNR01017390.1:12698-53423
Accession: 29158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000011051	ResIII	PF04851.15	2.5e-05	1	1
ENSUAMP00000011627	ResIII	PF04851.15	2.6e-05	1	1
ENSUAMP00000011919	ResIII	PF04851.15	3.1e-05	1	1
ENSUAMP00000011175	ResIII	PF04851.15	3.3e-05	1	1
ENSUAMP00000011635	ResIII	PF04851.15	3.4e-05	1	1
ENSUAMP00000011176	ResIII	PF04851.15	3.5e-05	1	1
ENSUAMP00000010984	ResIII	PF04851.15	4.1e-05	1	1
ENSUAMP00000010982	ResIII	PF04851.15	4.2e-05	1	1
ENSUAMP00000010978	ResIII	PF04851.15	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000012351	SBNO2-203	3462	-	ENSUAMP00000010984	1153 (aa)	-	-
ENSUAMT00000013070	SBNO2-207	2601	-	ENSUAMP00000011627	866 (aa)	-	-
ENSUAMT00000012344	SBNO2-201	3660	-	ENSUAMP00000010978	1219 (aa)	-	-
ENSUAMT00000012348	SBNO2-202	3549	-	ENSUAMP00000010982	1182 (aa)	-	-
ENSUAMT00000013250	SBNO2-209	3006	-	ENSUAMP00000011793	1001 (aa)	-	-
ENSUAMT00000013079	SBNO2-208	3057	-	ENSUAMP00000011635	1018 (aa)	-	-
ENSUAMT00000012424	SBNO2-204	2373	-	ENSUAMP00000011051	790 (aa)	-	-
ENSUAMT00000013394	SBNO2-210	2844	-	ENSUAMP00000011919	947 (aa)	-	-
ENSUAMT00000012567	SBNO2-206	3102	-	ENSUAMP00000011176	1033 (aa)	-	-
ENSUAMT00000012566	SBNO2-205	3039	-	ENSUAMP00000011175	1012 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000006568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000006568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000006568	SBNO2	89	67.494	ENSUAMG00000019671	SBNO1	62	67.574

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000006568	SBNO2	99	87.871	ENSG00000064932	SBNO2	87	89.118	Homo_sapiens
ENSUAMG00000006568	SBNO2	93	71.824	ENSAPOG00000003185	si:ch73-63e15.2	82	66.972	Acanthochromis_polyacanthus
ENSUAMG00000006568	SBNO2	93	71.940	ENSAOCG00000016581	si:ch73-63e15.2	93	71.369	Amphiprion_ocellaris
ENSUAMG00000006568	SBNO2	93	71.940	ENSAPEG00000008862	si:ch73-63e15.2	69	70.900	Amphiprion_percula
ENSUAMG00000006568	SBNO2	91	74.622	ENSATEG00000023838	si:ch73-63e15.2	93	71.596	Anabas_testudineus
ENSUAMG00000006568	SBNO2	92	85.909	ENSAPLG00000007158	SBNO2	82	78.232	Anas_platyrhynchos
ENSUAMG00000006568	SBNO2	59	79.149	ENSACAG00000006370	-	96	86.279	Anolis_carolinensis
ENSUAMG00000006568	SBNO2	100	84.932	ENSANAG00000026685	SBNO2	90	86.126	Aotus_nancymaae
ENSUAMG00000006568	SBNO2	93	70.983	ENSACLG00000005090	si:ch73-63e15.2	66	69.783	Astatotilapia_calliptera
ENSUAMG00000006568	SBNO2	91	74.406	ENSAMXG00000015881	si:ch73-63e15.2	75	70.363	Astyanax_mexicanus
ENSUAMG00000006568	SBNO2	93	72.023	ENSAMXG00000018868	sbno2a	95	70.928	Astyanax_mexicanus
ENSUAMG00000006568	SBNO2	100	91.416	ENSBTAG00000020780	SBNO2	88	92.738	Bos_taurus
ENSUAMG00000006568	SBNO2	99	96.938	ENSCAFG00000019543	SBNO2	89	96.938	Canis_familiaris
ENSUAMG00000006568	SBNO2	94	96.938	ENSCAFG00020017115	SBNO2	88	96.938	Canis_lupus_dingo
ENSUAMG00000006568	SBNO2	100	91.003	ENSCHIG00000026127	SBNO2	88	92.476	Capra_hircus
ENSUAMG00000006568	SBNO2	91	86.957	ENSCAPG00000005731	SBNO2	92	84.650	Cavia_aperea
ENSUAMG00000006568	SBNO2	99	83.862	ENSCPOG00000007477	SBNO2	88	84.650	Cavia_porcellus
ENSUAMG00000006568	SBNO2	100	85.103	ENSCCAG00000037518	SBNO2	90	86.300	Cebus_capucinus
ENSUAMG00000006568	SBNO2	99	87.784	ENSCATG00000037046	SBNO2	88	87.784	Cercocebus_atys
ENSUAMG00000006568	SBNO2	91	93.779	ENSCLAG00000010178	SBNO2	90	90.288	Chinchilla_lanigera
ENSUAMG00000006568	SBNO2	99	87.784	ENSCSAG00000012317	SBNO2	88	87.784	Chlorocebus_sabaeus
ENSUAMG00000006568	SBNO2	93	87.500	ENSCPBG00000008920	SBNO2	91	77.495	Chrysemys_picta_bellii
ENSUAMG00000006568	SBNO2	100	83.564	ENSCANG00000036745	SBNO2	99	83.537	Colobus_angolensis_palliatus
ENSUAMG00000006568	SBNO2	100	82.327	ENSCGRG00001023960	Sbno2	89	82.677	Cricetulus_griseus_chok1gshd
ENSUAMG00000006568	SBNO2	100	84.441	ENSCGRG00000011984	Sbno2	89	84.790	Cricetulus_griseus_crigri
ENSUAMG00000006568	SBNO2	93	69.017	ENSCSEG00000006856	si:ch73-63e15.2	85	68.677	Cynoglossus_semilaevis
ENSUAMG00000006568	SBNO2	91	74.461	ENSCVAG00000005663	si:ch73-63e15.2	70	70.094	Cyprinodon_variegatus
ENSUAMG00000006568	SBNO2	93	70.751	ENSDARG00000098801	sbno2a	83	63.417	Danio_rerio
ENSUAMG00000006568	SBNO2	91	74.082	ENSDARG00000016188	SBNO2	74	69.304	Danio_rerio
ENSUAMG00000006568	SBNO2	99	88.199	ENSDORG00000002916	Sbno2	87	88.199	Dipodomys_ordii
ENSUAMG00000006568	SBNO2	100	92.476	ENSEASG00005021621	SBNO2	89	92.476	Equus_asinus_asinus
ENSUAMG00000006568	SBNO2	100	92.388	ENSECAG00000011827	SBNO2	89	92.388	Equus_caballus
ENSUAMG00000006568	SBNO2	91	80.726	ENSELUG00000020457	si:ch73-63e15.2	74	67.777	Esox_lucius
ENSUAMG00000006568	SBNO2	94	74.613	ENSFALG00000013988	SBNO2	84	74.613	Ficedula_albicollis
ENSUAMG00000006568	SBNO2	91	93.192	ENSFDAG00000015186	SBNO2	90	84.454	Fukomys_damarensis
ENSUAMG00000006568	SBNO2	93	71.363	ENSFHEG00000022262	si:ch73-63e15.2	69	69.479	Fundulus_heteroclitus
ENSUAMG00000006568	SBNO2	93	71.163	ENSGMOG00000007542	si:ch73-63e15.2	86	70.296	Gadus_morhua
ENSUAMG00000006568	SBNO2	92	85.455	ENSGALG00000037522	SBNO2	77	77.673	Gallus_gallus
ENSUAMG00000006568	SBNO2	93	71.016	ENSGAFG00000004860	si:ch73-63e15.2	82	69.915	Gambusia_affinis
ENSUAMG00000006568	SBNO2	89	74.403	ENSGACG00000013190	si:ch73-63e15.2	86	71.238	Gasterosteus_aculeatus
ENSUAMG00000006568	SBNO2	92	87.727	ENSGAGG00000008348	SBNO2	79	78.828	Gopherus_agassizii
ENSUAMG00000006568	SBNO2	93	71.098	ENSHBUG00000010742	si:ch73-63e15.2	69	70.038	Haplochromis_burtoni
ENSUAMG00000006568	SBNO2	100	88.112	ENSHGLG00000008739	SBNO2	89	88.199	Heterocephalus_glaber_female
ENSUAMG00000006568	SBNO2	92	93.548	ENSHGLG00100005269	SBNO2	90	90.865	Heterocephalus_glaber_male
ENSUAMG00000006568	SBNO2	93	72.158	ENSHCOG00000000884	si:ch73-63e15.2	77	70.543	Hippocampus_comes
ENSUAMG00000006568	SBNO2	91	74.757	ENSIPUG00000000537	si:ch73-63e15.2	76	70.504	Ictalurus_punctatus
ENSUAMG00000006568	SBNO2	93	71.561	ENSIPUG00000019672	sbno2	93	70.613	Ictalurus_punctatus
ENSUAMG00000006568	SBNO2	100	88.492	ENSSTOG00000025832	SBNO2	89	88.666	Ictidomys_tridecemlineatus
ENSUAMG00000006568	SBNO2	99	83.406	ENSJJAG00000017397	Sbno2	84	83.581	Jaculus_jaculus
ENSUAMG00000006568	SBNO2	93	71.214	ENSKMAG00000005541	si:ch73-63e15.2	70	70.633	Kryptolebias_marmoratus
ENSUAMG00000006568	SBNO2	93	71.561	ENSLBEG00000025016	si:ch73-63e15.2	97	70.533	Labrus_bergylta
ENSUAMG00000006568	SBNO2	86	61.527	ENSLBEG00000005937	-	99	64.168	Labrus_bergylta
ENSUAMG00000006568	SBNO2	87	67.852	ENSLACG00000012598	SBNO2	99	73.636	Latimeria_chalumnae
ENSUAMG00000006568	SBNO2	89	76.310	ENSLOCG00000004643	si:ch73-63e15.2	76	71.851	Lepisosteus_oculatus
ENSUAMG00000006568	SBNO2	100	80.893	ENSLAFG00000008824	SBNO2	84	89.775	Loxodonta_africana
ENSUAMG00000006568	SBNO2	99	86.763	ENSMFAG00000040030	SBNO2	89	86.201	Macaca_fascicularis
ENSUAMG00000006568	SBNO2	99	87.871	ENSMMUG00000010886	SBNO2	88	87.871	Macaca_mulatta
ENSUAMG00000006568	SBNO2	99	87.696	ENSMNEG00000039927	SBNO2	89	87.696	Macaca_nemestrina
ENSUAMG00000006568	SBNO2	100	83.879	ENSMLEG00000038556	SBNO2	97	87.958	Mandrillus_leucophaeus
ENSUAMG00000006568	SBNO2	93	71.594	ENSMAMG00000018758	si:ch73-63e15.2	68	70.465	Mastacembelus_armatus
ENSUAMG00000006568	SBNO2	93	70.983	ENSMZEG00005010682	si:ch73-63e15.2	66	69.943	Maylandia_zebra
ENSUAMG00000006568	SBNO2	93	82.430	ENSMGAG00000003801	SBNO2	83	76.525	Meleagris_gallopavo
ENSUAMG00000006568	SBNO2	100	84.864	ENSMAUG00000008034	Sbno2	89	85.214	Mesocricetus_auratus
ENSUAMG00000006568	SBNO2	100	88.451	ENSMICG00000013071	SBNO2	89	88.451	Microcebus_murinus
ENSUAMG00000006568	SBNO2	99	84.353	ENSMOCG00000010504	Sbno2	89	84.716	Microtus_ochrogaster
ENSUAMG00000006568	SBNO2	99	79.203	ENSMODG00000005382	SBNO2	82	79.203	Monodelphis_domestica
ENSUAMG00000006568	SBNO2	89	65.264	ENSMALG00000021831	si:ch73-63e15.2	97	66.070	Monopterus_albus
ENSUAMG00000006568	SBNO2	99	84.353	ENSMUSG00000035673	Sbno2	99	81.421	Mus_musculus
ENSUAMG00000006568	SBNO2	99	84.602	MGP_PahariEiJ_G0030976	Sbno2	89	84.965	Mus_pahari
ENSUAMG00000006568	SBNO2	91	92.671	MGP_SPRETEiJ_G0016381	Sbno2	89	84.965	Mus_spretus
ENSUAMG00000006568	SBNO2	89	94.732	ENSMPUG00000008747	SBNO2	100	94.732	Mustela_putorius_furo
ENSUAMG00000006568	SBNO2	99	84.602	ENSNGAG00000004308	Sbno2	85	84.602	Nannospalax_galili
ENSUAMG00000006568	SBNO2	93	70.034	ENSNBRG00000022968	si:ch73-63e15.2	93	75.180	Neolamprologus_brichardi
ENSUAMG00000006568	SBNO2	93	91.411	ENSNLEG00000001305	SBNO2	87	91.411	Nomascus_leucogenys
ENSUAMG00000006568	SBNO2	82	74.883	ENSMEUG00000013511	-	75	76.114	Notamacropus_eugenii
ENSUAMG00000006568	SBNO2	92	91.224	ENSOPRG00000017238	SBNO2	86	87.992	Ochotona_princeps
ENSUAMG00000006568	SBNO2	99	84.268	ENSODEG00000011822	SBNO2	88	86.335	Octodon_degus
ENSUAMG00000006568	SBNO2	93	71.247	ENSONIG00000002490	si:ch73-63e15.2	83	70.047	Oreochromis_niloticus
ENSUAMG00000006568	SBNO2	93	70.561	ENSORLG00000000913	si:ch73-63e15.2	70	68.522	Oryzias_latipes
ENSUAMG00000006568	SBNO2	93	70.561	ENSORLG00020010978	si:ch73-63e15.2	70	68.421	Oryzias_latipes_hni
ENSUAMG00000006568	SBNO2	93	70.561	ENSORLG00015000202	si:ch73-63e15.2	70	68.618	Oryzias_latipes_hsok
ENSUAMG00000006568	SBNO2	93	70.561	ENSOMEG00000000359	si:ch73-63e15.2	73	64.888	Oryzias_melastigma
ENSUAMG00000006568	SBNO2	100	88.518	ENSOARG00000011130	SBNO2	92	89.939	Ovis_aries
ENSUAMG00000006568	SBNO2	99	87.696	ENSPPAG00000032482	SBNO2	83	88.931	Pan_paniscus
ENSUAMG00000006568	SBNO2	98	86.667	ENSPTRG00000010185	SBNO2	88	88.981	Pan_troglodytes
ENSUAMG00000006568	SBNO2	99	83.770	ENSPANG00000009658	SBNO2	88	83.770	Papio_anubis
ENSUAMG00000006568	SBNO2	91	72.834	ENSPKIG00000009707	-	80	71.516	Paramormyrops_kingsleyae
ENSUAMG00000006568	SBNO2	93	70.554	ENSPKIG00000024201	si:ch73-63e15.2	75	69.628	Paramormyrops_kingsleyae
ENSUAMG00000006568	SBNO2	91	87.273	ENSPSIG00000002852	SBNO2	100	80.102	Pelodiscus_sinensis
ENSUAMG00000006568	SBNO2	93	70.766	ENSPMGG00000014375	si:ch73-63e15.2	79	70.519	Periophthalmus_magnuspinnatus
ENSUAMG00000006568	SBNO2	100	81.017	ENSPEMG00000024122	Sbno2	89	81.190	Peromyscus_maniculatus_bairdii
ENSUAMG00000006568	SBNO2	99	79.029	ENSPCIG00000011264	SBNO2	82	79.463	Phascolarctos_cinereus
ENSUAMG00000006568	SBNO2	91	78.604	ENSPFOG00000004096	si:ch73-63e15.2	91	69.896	Poecilia_formosa
ENSUAMG00000006568	SBNO2	93	71.247	ENSPLAG00000014653	si:ch73-63e15.2	69	70.009	Poecilia_latipinna
ENSUAMG00000006568	SBNO2	93	71.016	ENSPMEG00000002129	si:ch73-63e15.2	90	71.064	Poecilia_mexicana
ENSUAMG00000006568	SBNO2	89	75.275	ENSPREG00000006755	si:ch73-63e15.2	71	66.522	Poecilia_reticulata
ENSUAMG00000006568	SBNO2	89	93.659	ENSPCAG00000012256	SBNO2	84	79.064	Procavia_capensis
ENSUAMG00000006568	SBNO2	99	79.652	ENSPCOG00000015216	SBNO2	89	79.130	Propithecus_coquereli
ENSUAMG00000006568	SBNO2	93	70.983	ENSPNYG00000019926	si:ch73-63e15.2	69	69.943	Pundamilia_nyererei
ENSUAMG00000006568	SBNO2	93	71.676	ENSPNAG00000026609	sbno2a	82	72.542	Pygocentrus_nattereri
ENSUAMG00000006568	SBNO2	91	74.838	ENSPNAG00000020260	si:ch73-63e15.2	75	70.190	Pygocentrus_nattereri
ENSUAMG00000006568	SBNO2	91	92.908	ENSRNOG00000013987	Sbno2	87	88.665	Rattus_norvegicus
ENSUAMG00000006568	SBNO2	93	86.260	ENSRBIG00000009740	SBNO2	89	84.427	Rhinopithecus_bieti
ENSUAMG00000006568	SBNO2	88	88.035	ENSRROG00000044671	SBNO2	85	88.035	Rhinopithecus_roxellana
ENSUAMG00000006568	SBNO2	100	86.038	ENSSBOG00000023562	SBNO2	90	86.038	Saimiri_boliviensis_boliviensis
ENSUAMG00000006568	SBNO2	91	83.492	ENSSHAG00000010241	SBNO2	90	81.220	Sarcophilus_harrisii
ENSUAMG00000006568	SBNO2	93	71.478	ENSSFOG00015005861	si:ch73-63e15.2	84	68.277	Scleropages_formosus
ENSUAMG00000006568	SBNO2	91	74.298	ENSSMAG00000012489	si:ch73-63e15.2	67	70.275	Scophthalmus_maximus
ENSUAMG00000006568	SBNO2	91	75.216	ENSSDUG00000003527	si:ch73-63e15.2	67	71.008	Seriola_dumerili
ENSUAMG00000006568	SBNO2	91	74.919	ENSSLDG00000004623	si:ch73-63e15.2	67	71.103	Seriola_lalandi_dorsalis
ENSUAMG00000006568	SBNO2	91	75.918	ENSSPAG00000017717	si:ch73-63e15.2	68	71.415	Stegastes_partitus
ENSUAMG00000006568	SBNO2	97	91.688	ENSSSCG00000030042	SBNO2	84	93.176	Sus_scrofa
ENSUAMG00000006568	SBNO2	93	70.426	ENSTRUG00000018193	si:ch73-63e15.2	80	70.194	Takifugu_rubripes
ENSUAMG00000006568	SBNO2	67	69.565	ENSTNIG00000000856	si:ch73-63e15.2	99	74.566	Tetraodon_nigroviridis
ENSUAMG00000006568	SBNO2	99	96.938	ENSVVUG00000022823	SBNO2	87	96.938	Vulpes_vulpes
ENSUAMG00000006568	SBNO2	91	81.532	ENSXETG00000021579	sbno2	82	77.624	Xenopus_tropicalis
ENSUAMG00000006568	SBNO2	87	78.604	ENSXCOG00000009209	si:ch73-63e15.2	91	70.807	Xiphophorus_couchianus
ENSUAMG00000006568	SBNO2	93	71.247	ENSXMAG00000012091	si:ch73-63e15.2	72	75.165	Xiphophorus_maculatus